RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 FADS3Q9Y5Q0 445 aa17.84■□□□□ 0.45
CCDC188-201ENST00000439765 KNTC1P50748 2209 aa17.84■□□□□ 0.45
CCDC188-201ENST00000439765 PLXNB3Q9ULL4 1909 aa17.83■□□□□ 0.45
CCDC188-201ENST00000439765 hCG_1818297A0A087WSY0 165 aa17.83■□□□□ 0.45
CCDC188-201ENST00000439765 A0A1B0GVT2 93 aa17.83■□□□□ 0.45
CCDC188-201ENST00000439765 KCNK1O00180 336 aa17.83■□□□□ 0.45
CCDC188-201ENST00000439765 CST8O60676 142 aa17.83■□□□□ 0.45
CCDC188-201ENST00000439765 PECAM1P16284 738 aaPredicted RBP17.83■□□□□ 0.45
CCDC188-201ENST00000439765 ZFXP17010 805 aaPredicted RBP17.83■□□□□ 0.45
CCDC188-201ENST00000439765 XPAP23025 273 aaPredicted RBP17.83■□□□□ 0.45
CCDC188-201ENST00000439765 CSNK1DP48730 415 aa17.83■□□□□ 0.45
CCDC188-201ENST00000439765 BCL2L1Q07817 233 aa17.83■□□□□ 0.45
CCDC188-201ENST00000439765 ADCY2Q08462 1091 aa17.83■□□□□ 0.45
CCDC188-201ENST00000439765 PPIDQ08752 370 aaKnown RBP17.83■□□□□ 0.45
CCDC188-201ENST00000439765 TFDP2Q14188 446 aa17.83■□□□□ 0.45
CCDC188-201ENST00000439765 PPP2R5EQ16537 467 aa17.83■□□□□ 0.45
CCDC188-201ENST00000439765 SETMARQ53H47 684 aaPredicted RBP17.83■□□□□ 0.45
CCDC188-201ENST00000439765 DNTTIP2Q5QJE6 756 aaKnown RBP17.83■□□□□ 0.45
CCDC188-201ENST00000439765 SEL1L2Q5TEA6 688 aa17.83■□□□□ 0.45
CCDC188-201ENST00000439765 B4GALNT4Q76KP1 1039 aa17.83■□□□□ 0.45
CCDC188-201ENST00000439765 ADAT2Q7Z6V5 191 aaKnown RBP17.83■□□□□ 0.45
CCDC188-201ENST00000439765 TTC7BQ86TV6 843 aa17.83■□□□□ 0.45
CCDC188-201ENST00000439765 PRPF39Q86UA1 669 aaKnown RBP17.83■□□□□ 0.45
CCDC188-201ENST00000439765 HORMAD1Q86X24 394 aa17.83■□□□□ 0.45
CCDC188-201ENST00000439765 RAB7BQ96AH8 199 aa17.83■□□□□ 0.45
CCDC188-201ENST00000439765 HAUS1Q96CS2 278 aa17.83■□□□□ 0.45
CCDC188-201ENST00000439765 NSMCE3Q96MG7 304 aa17.83■□□□□ 0.45
CCDC188-201ENST00000439765 OLFM3Q96PB7 478 aa17.83■□□□□ 0.45
CCDC188-201ENST00000439765 SUV39H2Q9H5I1 410 aa17.83■□□□□ 0.45
CCDC188-201ENST00000439765 FZD3Q9NPG1 666 aa17.83■□□□□ 0.45
CCDC188-201ENST00000439765 SCUBE2Q9NQ36 999 aa17.83■□□□□ 0.45
CCDC188-201ENST00000439765 DKK3Q9UBP4 350 aa17.83■□□□□ 0.45
CCDC188-201ENST00000439765 ZFR2Q9UPR6 939 aaKnown RBP17.83■□□□□ 0.45
CCDC188-201ENST00000439765 WNT9AO14904 365 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 ZNF185O15231 689 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 MATN3O15232 486 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 AP1G1O43747 822 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 CEP104O60308 925 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 NEBLO76041 1014 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 URI1O94763 535 aaPredicted RBP17.82■□□□□ 0.44
CCDC188-201ENST00000439765 PRKCGP05129 697 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 ZNF883P0CG24 379 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 ITIH2P19823 946 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 CR2P20023 1033 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 CCNCP24863 283 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 PTPN7P35236 360 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 NSUN2Q08J23 767 aaKnown RBP eCLIP17.82■□□□□ 0.44
CCDC188-201ENST00000439765 AP1B1Q10567 949 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 ZNF284Q2VY69 593 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 FAM182AQ5T1J6 154 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 CCDC13Q8IYE1 715 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 RASGEF1CQ8N431 466 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 TEX26Q8N6G2 289 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 MAML1Q92585 1016 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 ZNF641Q96N77 438 aaPredicted RBP17.82■□□□□ 0.44
CCDC188-201ENST00000439765 TSGA13Q96PP4 275 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 NUDCD1Q96RS6 583 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 OSBPL8Q9BZF1 889 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 NOD2Q9HC29 1040 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 EFR3BQ9Y2G0 817 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 ARID1BQ8NFD5 2236 aaPredicted RBP17.82■□□□□ 0.44
CCDC188-201ENST00000439765 FAM208BQ5VWN6 2430 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 SPAARA0A1B0GVQ0 90 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 TSPAN11A1L157 253 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 PPP1R12AO14974 1030 aaPredicted RBP17.82■□□□□ 0.44
CCDC188-201ENST00000439765 SLC31A1O15431 190 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 HLA-DQB2P05538 268 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 CCNB1P14635 433 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 GRIA4P48058 902 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 RACK1P63244 317 aaKnown RBP17.82■□□□□ 0.44
CCDC188-201ENST00000439765 SIM1P81133 766 aaPredicted RBP17.82■□□□□ 0.44
CCDC188-201ENST00000439765 BNC1Q01954 994 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 SEMG2Q02383 582 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 ITKQ08881 620 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 TEAD4Q15561 434 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 TMEM259Q4ZIN3 620 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 NAPEPLDQ6IQ20 393 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 KIAA1161Q6NSJ0 714 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 NEK5Q6P3R8 708 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 BRAT1Q6PJG6 821 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 IL27RAQ6UWB1 636 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 CREG2Q8IUH2 290 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 PDCD6IPQ8WUM4 868 aaKnown RBP17.82■□□□□ 0.44
CCDC188-201ENST00000439765 MS4A14Q96JA4 679 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 WRAP53Q9BUR4 548 aaKnown RBP17.82■□□□□ 0.44
CCDC188-201ENST00000439765 HEMGNQ9BXL5 484 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 TMEM121BQ9BXQ6 578 aaPredicted RBP17.82■□□□□ 0.44
CCDC188-201ENST00000439765 CEP41Q9BYV8 373 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 RBM22Q9NW64 420 aaKnown RBP eCLIP17.82■□□□□ 0.44
CCDC188-201ENST00000439765 SEPT10Q9P0V9 454 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 TTC7AQ9ULT0 858 aaPredicted RBP17.82■□□□□ 0.44
CCDC188-201ENST00000439765 TPX2Q9ULW0 747 aaKnown RBP17.82■□□□□ 0.44
CCDC188-201ENST00000439765 CA5BQ9Y2D0 317 aa17.82■□□□□ 0.44
CCDC188-201ENST00000439765 CHD6Q8TD26 2715 aa17.81■□□□□ 0.44
CCDC188-201ENST00000439765 ACACAQ13085 2346 aa17.81■□□□□ 0.44
CCDC188-201ENST00000439765 AREL1O15033 823 aa17.81■□□□□ 0.44
CCDC188-201ENST00000439765 CER1O95813 267 aa17.81■□□□□ 0.44
CCDC188-201ENST00000439765 TOP3BO95985 862 aaKnown RBP17.81■□□□□ 0.44
CCDC188-201ENST00000439765 TIMP2P16035 220 aa17.81■□□□□ 0.44
CCDC188-201ENST00000439765 TGM2P21980 687 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms