RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 FUNDC1Q8IVP5 155 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 DHRSXQ8N5I4 330 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 STYXQ8WUJ0 223 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 COPS5Q92905 334 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 ITCHQ96J02 903 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 ING2Q9H160 280 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 NANOGQ9H9S0 305 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 SLAMF8Q9P0V8 285 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 CD300AQ9UGN4 299 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 MICAL3Q7RTP6 2002 aa13.47□□□□□ -0.25
ACTN1-204ENST00000438964 AQP9O43315 295 aa13.46□□□□□ -0.25
ACTN1-204ENST00000438964 B4GALT4O60513 344 aa13.46□□□□□ -0.25
ACTN1-204ENST00000438964 CABYRO75952 493 aa13.46□□□□□ -0.25
ACTN1-204ENST00000438964 JCHAINP01591 159 aa13.46□□□□□ -0.25
ACTN1-204ENST00000438964 ALDOCP09972 364 aaKnown RBP13.46□□□□□ -0.25
ACTN1-204ENST00000438964 MYF6P23409 242 aa13.46□□□□□ -0.25
ACTN1-204ENST00000438964 MAGEA12P43365 314 aa13.46□□□□□ -0.25
ACTN1-204ENST00000438964 AQP6Q13520 282 aa13.46□□□□□ -0.25
ACTN1-204ENST00000438964 ACAP2Q15057 778 aa13.46□□□□□ -0.25
ACTN1-204ENST00000438964 SLC10A6Q3KNW5 377 aa13.46□□□□□ -0.25
ACTN1-204ENST00000438964 SLC36A3Q495N2 470 aa13.46□□□□□ -0.25
ACTN1-204ENST00000438964 SYPL2Q5VXT5 272 aa13.46□□□□□ -0.25
ACTN1-204ENST00000438964 NIPAL1Q6NVV3 410 aa13.46□□□□□ -0.25
ACTN1-204ENST00000438964 ABRAXAS1Q6UWZ7 409 aa13.46□□□□□ -0.25
ACTN1-204ENST00000438964 RNF19BQ6ZMZ0 732 aa13.46□□□□□ -0.25
ACTN1-204ENST00000438964 C14orf80Q86SX3 495 aa13.46□□□□□ -0.25
ACTN1-204ENST00000438964 CUZD1Q86UP6 607 aa13.46□□□□□ -0.25
ACTN1-204ENST00000438964 HS3ST5Q8IZT8 346 aa13.46□□□□□ -0.25
ACTN1-204ENST00000438964 NPWQ8N729 165 aa13.46□□□□□ -0.25
ACTN1-204ENST00000438964 CDHR5Q9HBB8 845 aa13.46□□□□□ -0.25
ACTN1-204ENST00000438964 ITM2CQ9NQX7 267 aa13.46□□□□□ -0.25
ACTN1-204ENST00000438964 NRBP2Q9NSY0 501 aa13.46□□□□□ -0.25
ACTN1-204ENST00000438964 USP21Q9UK80 565 aa13.46□□□□□ -0.25
ACTN1-204ENST00000438964 BTRCQ9Y297 605 aa13.46□□□□□ -0.25
ACTN1-204ENST00000438964 FAM95CA0A1B0GW59 222 aa13.46□□□□□ -0.26
ACTN1-204ENST00000438964 CNOT3O75175 753 aaKnown RBP13.46□□□□□ -0.26
ACTN1-204ENST00000438964 SUPT7LO94864 414 aa13.46□□□□□ -0.26
ACTN1-204ENST00000438964 VTNP04004 478 aa13.46□□□□□ -0.26
ACTN1-204ENST00000438964 MLNP12872 115 aa13.46□□□□□ -0.26
ACTN1-204ENST00000438964 FASP25445 335 aa13.46□□□□□ -0.26
ACTN1-204ENST00000438964 CD68P34810 354 aaPredicted RBP13.46□□□□□ -0.26
ACTN1-204ENST00000438964 CA8P35219 290 aa13.46□□□□□ -0.26
ACTN1-204ENST00000438964 MOGQ16653 247 aa13.46□□□□□ -0.26
ACTN1-204ENST00000438964 CYBRD1Q53TN4 286 aa13.46□□□□□ -0.26
ACTN1-204ENST00000438964 SAMD4BQ5PRF9 694 aaKnown RBP13.46□□□□□ -0.26
ACTN1-204ENST00000438964 CLIP4Q8N3C7 705 aa13.46□□□□□ -0.26
ACTN1-204ENST00000438964 SDCCAG3Q96C92 435 aa13.46□□□□□ -0.26
ACTN1-204ENST00000438964 KIF12Q96FN5 646 aa13.46□□□□□ -0.26
ACTN1-204ENST00000438964 BEGAINQ9BUH8 593 aa13.46□□□□□ -0.26
ACTN1-204ENST00000438964 NDEL1Q9GZM8 345 aa13.46□□□□□ -0.26
ACTN1-204ENST00000438964 TCAF1Q9Y4C2 921 aa13.46□□□□□ -0.26
ACTN1-204ENST00000438964 PSMD11O00231 422 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 CLDN5O00501 218 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 UBFD1O14562 309 aaKnown RBP13.45□□□□□ -0.26
ACTN1-204ENST00000438964 CYP2C9P11712 490 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 TGFBR1P36897 503 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 HPCAL1P37235 193 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 ECT2LQ008S8 904 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 RFTN1Q14699 578 aaPredicted RBP13.45□□□□□ -0.26
ACTN1-204ENST00000438964 FAM117BQ6P1L5 589 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 TMEM135Q86UB9 458 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 PELI3Q8N2H9 469 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 IPMKQ8NFU5 416 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 ZFP90Q8TF47 636 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 HTRA1Q92743 480 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 KIAA1522Q9P206 1035 aaPredicted RBP13.45□□□□□ -0.26
ACTN1-204ENST00000438964 M0QYT0 321 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 TIMM44O43615 452 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 MAFO75444 373 aaPredicted RBP13.45□□□□□ -0.26
ACTN1-204ENST00000438964 BAIAP3O94812 1187 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 CAPN3P20807 821 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 PSMA4P25789 261 aaKnown RBP13.45□□□□□ -0.26
ACTN1-204ENST00000438964 NR4A2P43354 598 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 CHRNA4P43681 627 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 NR2C2P49116 596 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 GALNT2Q10471 571 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 SLC13A2Q13183 592 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 GRB7Q14451 532 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 TMEM236Q5W0B7 351 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 RWDD4Q6NW29 188 aaKnown RBP13.45□□□□□ -0.26
ACTN1-204ENST00000438964 HFE2Q6ZVN8 426 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 DCBLD1Q8N8Z6 715 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 ANKFN1Q8N957 763 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 ABHD11Q8NFV4 315 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 IL22Q9GZX6 179 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 SNX25Q9H3E2 840 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 DPP3Q9NY33 737 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 TMEM181Q9P2C4 612 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 MAP10Q9P2G4 905 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 ZNF214Q9UL59 606 aaPredicted RBP13.45□□□□□ -0.26
ACTN1-204ENST00000438964 CDH7Q9ULB5 785 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 CPQQ9Y646 472 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 A0A087WZ62 844 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 A0A0J9YYE9 177 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 ARPC2O15144 300 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 SIX3O95343 332 aaPredicted RBP13.45□□□□□ -0.26
ACTN1-204ENST00000438964 PABPC1P11940 636 aaKnown RBP13.45□□□□□ -0.26
ACTN1-204ENST00000438964 BMP2P12643 396 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 IL10P22301 178 aa13.45□□□□□ -0.26
ACTN1-204ENST00000438964 EFNA5P52803 228 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms