RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 DDR1Q08345 913 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 RAB30Q15771 203 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 COBLL1Q53SF7 1204 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 FAM76BQ5HYJ3 339 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 FAM209BQ5JX69 171 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 CCDC129Q6ZRS4 1044 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 DPP10Q8N608 796 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 TMEM217Q8N7C4 229 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 LRRC57Q8N9N7 239 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 RAET1EQ8TD07 263 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 RTP4Q96DX8 246 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 APOLD1Q96LR9 279 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 C1QTNF4Q9BXJ3 329 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 CCDC134Q9H6E4 229 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 TM7SF3Q9NS93 570 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 KCNG2Q9UJ96 466 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 NFU1Q9UMS0 254 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 ZBTB1Q9Y2K1 713 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 RIPOR2Q9Y4F9 1068 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 COPG1Q9Y678 874 aaKnown RBP3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 LAMA5O15230 3695 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 ZNF644Q9H582 1327 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 TLN2Q9Y4G6 2542 aa3.13□□□□□ -1.91
HMGB1P18-201ENST00000438801 HEG1Q9ULI3 1381 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 PPLO60437 1756 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 TBC1D3DA0A087WVF3 549 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 TBC1D3IA0A087WXS9 549 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 TBC1D3EA0A087X179 549 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 TBC1D3KA0A087X1G2 549 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 PLSCR5A0PG75 271 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 TBC1D3BA6NDS4 549 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 TBC1D3FA6NER0 549 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 SAC3D1A6NKF1 404 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 TBC1D3LB9A6J9 549 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 HNRNPDLO14979 420 aaKnown RBP3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 SLC16A5O15375 505 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 RPP40O75818 363 aaKnown RBP3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 TBC1D3HP0C7X1 549 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 TNFSF4P23510 183 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 RFC4P35249 363 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 ALDH18A1P54886 795 aaKnown RBP3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 FAM3BP58499 235 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 ARHGAP8P85298 464 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 ZBTB16Q05516 673 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 HNF4GQ14541 408 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 PLCB4Q15147 1175 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 ZNF718Q3SXZ3 478 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 ZNF569Q5MCW4 686 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 OTUD3Q5T2D3 398 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 TBC1D3GQ6DHY5 549 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 TBC1D3CQ6IPX1 549 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 RINT1Q6NUQ1 792 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 H1FNTQ75WM6 255 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 DPP9Q86TI2 863 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 TBC1D3Q8IZP1 549 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 CLEC4CQ8WTT0 213 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 FRMD8Q9BZ67 464 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 ACTR5Q9H9F9 607 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 ARL15Q9NXU5 204 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 SHROOM3Q8TF72 1996 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 SCN5AQ14524 2016 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 CCDC7Q96M83 1385 aa3.12□□□□□ -1.91
HMGB1P18-201ENST00000438801 IQGAP3Q86VI3 1631 aa3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 CACNA1DQ01668 2161 aa3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 KIF28PB7ZC32 967 aa3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 ZNF12P17014 697 aa3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 KLRK1P26718 216 aa3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 AVPR1AP37288 418 aa3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 PRMT2P55345 433 aa3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 TMPRSS3P57727 454 aa3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 POU3F1Q03052 451 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 SAFBQ15424 915 aaKnown RBP eCLIP3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 ZNF672Q499Z4 452 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 HERC4Q5GLZ8 1057 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 N4BP2L1Q5TBK1 243 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 TMEM71Q6P5X7 295 aa3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 ANKS1BQ7Z6G8 1248 aa3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 FJX1Q86VR8 437 aa3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 TMEM200AQ86VY9 491 aa3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 OR14A16Q8NHC5 309 aa3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 FAM110DQ8TAY7 271 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 FAM216AQ8WUB2 273 aa3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 TMED6Q8WW62 240 aa3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 SORBS1Q9BX66 1292 aaKnown RBP3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 TMEM120AQ9BXJ8 343 aa3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 NAA15Q9BXJ9 866 aaKnown RBP3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 KLHL31Q9H511 634 aa3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 RETREG1Q9H6L5 497 aa3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 DDX31Q9H8H2 851 aaKnown RBP3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 ANKMY1Q9P2S6 941 aa3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 RAP2CQ9Y3L5 183 aa3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 PKP3Q9Y446 797 aa3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 CEP83Q9Y592 693 aa3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 AKAP13Q12802 2813 aa3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 KIF1BO60333 1816 aa3.11□□□□□ -1.91
HMGB1P18-201ENST00000438801 LOC102724159A0A0B4J2E5 919 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 TCRBV7S3A2A0A539 114 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 APAF1O14727 1248 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 PMM2O15305 246 aa3.1□□□□□ -1.91
HMGB1P18-201ENST00000438801 PPM1GO15355 546 aaPredicted RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms