RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 KCNQ1P51787 676 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 GPX6P59796 221 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 ABCE1P61221 599 aaKnown RBP11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 SNRPD1P62314 119 aaKnown RBP11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 PAFAH1B3Q15102 231 aaKnown RBP11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 EFL1Q7Z2Z2 1120 aaKnown RBP11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 LINC01465Q8N7H1 131 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 MIPEPQ99797 713 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 MAGEH1Q9H213 219 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 ZDHHC6Q9H6R6 413 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 CLIC5Q9NZA1 410 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 XPR1Q9UBH6 696 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 ZNF180Q9UJW8 692 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 HS3ST4Q9Y661 456 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 UGT1A9O60656 530 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 USP1O94782 785 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 PFKMP08237 780 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 POLR2EP19388 210 aaKnown RBP11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 MSX2P35548 267 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 KCTD21Q4G0X4 260 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 GPR158Q5T848 1215 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 C16orf89Q6UX73 402 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 ARCQ7LC44 396 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 DNAJB7Q7Z6W7 309 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 MRPL10Q7Z7H8 261 aaKnown RBP11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 UNC5BQ8IZJ1 945 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 RFWD2Q8NHY2 731 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 AZIN2Q96A70 460 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 KATNBL1Q9H079 304 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 UGT1A7Q9HAW7 530 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 UGT1A10Q9HAW8 530 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 UGT1A8Q9HAW9 530 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 USP29Q9HBJ7 922 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 TAGLN3Q9UI15 199 aa11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 MYO18AQ92614 2054 aaKnown RBP11.64□□□□□ -0.55
TRAPPC9-202ENST00000438773 ADAMTS4O75173 837 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 GUCA1CO95843 209 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 SKIV2L2P42285 1042 aaKnown RBP11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 MAPKAPK2P49137 400 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 PRKAA2P54646 552 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 STX5Q13190 355 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 GRAMD4Q6IC98 578 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 CNKSR3Q6P9H4 555 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 C10orf107Q8IVU9 208 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 ARFGAP1Q8N6T3 406 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 OR52K2Q8NGK3 314 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 SERAC1Q96JX3 654 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 TRIM15Q9C019 465 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 ASB8Q9H765 288 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 ATP13A3Q9H7F0 1226 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 CASS4Q9NQ75 786 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 KCNK4Q9NYG8 393 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 YIPF1Q9Y548 306 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 PCDHGC4Q9Y5F7 938 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 TEX264Q9Y6I9 313 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 MYO7AQ13402 2215 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 A0A087X1B8 175 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 C1orf232A0A0U1RR37 186 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 CCL16O15467 120 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 ATP5BP06576 529 aaKnown RBP11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 C8AP07357 584 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 NME5P56597 212 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 DYNC1I2Q13409 638 aaKnown RBP11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 ANKS6Q68DC2 871 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 RNF19BQ6ZMZ0 732 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 PGBD3Q8N328 593 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 C10orf82Q8WW14 230 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 TBATAQ96M53 351 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 SLC2A13Q96QE2 648 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 TMEM175Q9BSA9 504 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 EURLQ9NYK6 297 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 VWA7Q9Y334 891 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 GABRDO14764 452 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 CLASP2O75122 1294 aaKnown RBP11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 MYO1DO94832 1006 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 SNUPNO95149 360 aaKnown RBP11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 PGM3O95394 542 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 ESRRBO95718 433 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 NDST3O95803 873 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 BPGMP07738 259 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 VAV1P15498 845 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 CDH4P55283 916 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 OLIG2Q13516 323 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 LRRTM3Q86VH5 581 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 CACUL1Q86Y37 369 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 OR4K2Q8NGD2 314 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 THAP11Q96EK4 314 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 AGAP2Q99490 1192 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 TMLHEQ9NVH6 421 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 LRRC42Q9Y546 428 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 NRXN2Q9P2S2 1712 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 PCNTO95613 3336 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 ABHD14A-ACY1A0A1B0GW23 586 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 CXorf49A8MYA2 514 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 CRHR1P34998 444 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 MAPK8P45983 427 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 IL2P60568 153 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 POLR2LP62875 67 aaKnown RBP11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 FPGSQ05932 587 aa11.63□□□□□ -0.55
TRAPPC9-202ENST00000438773 IL10RBQ08334 325 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms