RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 LRRC14Q15048 493 aa18.31■□□□□ 0.52
GTF3A-204ENST00000438571 E4F1Q66K89 784 aaPredicted RBP18.31■□□□□ 0.52
GTF3A-204ENST00000438571 DCUN1D2Q6PH85 259 aa18.31■□□□□ 0.52
GTF3A-204ENST00000438571 ENPP7Q6UWV6 458 aa18.31■□□□□ 0.52
GTF3A-204ENST00000438571 CYP4V2Q6ZWL3 525 aaPredicted RBP18.31■□□□□ 0.52
GTF3A-204ENST00000438571 RD3Q7Z3Z2 195 aa18.31■□□□□ 0.52
GTF3A-204ENST00000438571 B3GNT8Q7Z7M8 397 aa18.31■□□□□ 0.52
GTF3A-204ENST00000438571 SFTPA2Q8IWL1 248 aa18.31■□□□□ 0.52
GTF3A-204ENST00000438571 ARHGAP12Q8IWW6 846 aa18.31■□□□□ 0.52
GTF3A-204ENST00000438571 LSMEM2Q8N112 164 aa18.31■□□□□ 0.52
GTF3A-204ENST00000438571 NPWQ8N729 165 aa18.31■□□□□ 0.52
GTF3A-204ENST00000438571 TSEN2Q8NCE0 465 aaKnown RBP18.31■□□□□ 0.52
GTF3A-204ENST00000438571 TBATAQ96M53 351 aa18.31■□□□□ 0.52
GTF3A-204ENST00000438571 C1QTNF7Q9BXJ2 289 aa18.31■□□□□ 0.52
GTF3A-204ENST00000438571 DHX35Q9H5Z1 703 aaKnown RBP18.31■□□□□ 0.52
GTF3A-204ENST00000438571 GULP1Q9UBP9 304 aa18.31■□□□□ 0.52
GTF3A-204ENST00000438571 PCSK1NQ9UHG2 260 aa18.31■□□□□ 0.52
GTF3A-204ENST00000438571 PADI4Q9UM07 663 aa18.31■□□□□ 0.52
GTF3A-204ENST00000438571 HELZ2Q9BYK8 2649 aaKnown RBP18.3■□□□□ 0.52
GTF3A-204ENST00000438571 GM2AP17900 193 aa18.3■□□□□ 0.52
GTF3A-204ENST00000438571 PSMA2P25787 234 aa18.3■□□□□ 0.52
GTF3A-204ENST00000438571 LIG3P49916 1009 aa18.3■□□□□ 0.52
GTF3A-204ENST00000438571 AIF1P55008 147 aa18.3■□□□□ 0.52
GTF3A-204ENST00000438571 SKOR1P84550 965 aa18.3■□□□□ 0.52
GTF3A-204ENST00000438571 INPP5AQ14642 412 aa18.3■□□□□ 0.52
GTF3A-204ENST00000438571 NFATC4Q14934 902 aa18.3■□□□□ 0.52
GTF3A-204ENST00000438571 STX1AQ16623 288 aa18.3■□□□□ 0.52
GTF3A-204ENST00000438571 SASS6Q6UVJ0 657 aa18.3■□□□□ 0.52
GTF3A-204ENST00000438571 IRF2BP2Q7Z5L9 587 aa18.3■□□□□ 0.52
GTF3A-204ENST00000438571 PELI3Q8N2H9 469 aa18.3■□□□□ 0.52
GTF3A-204ENST00000438571 ZNF843Q8N446 348 aa18.3■□□□□ 0.52
GTF3A-204ENST00000438571 AOPEPQ8N6M6 819 aa18.3■□□□□ 0.52
GTF3A-204ENST00000438571 CCDC74AQ96AQ1 378 aa18.3■□□□□ 0.52
GTF3A-204ENST00000438571 APOOQ9BUR5 198 aa18.3■□□□□ 0.52
GTF3A-204ENST00000438571 EDEM3Q9BZQ6 932 aa18.3■□□□□ 0.52
GTF3A-204ENST00000438571 THSD1Q9NS62 852 aa18.3■□□□□ 0.52
GTF3A-204ENST00000438571 ANO10Q9NW15 660 aa18.3■□□□□ 0.52
GTF3A-204ENST00000438571 NCKIPSDQ9NZQ3 722 aa18.3■□□□□ 0.52
GTF3A-204ENST00000438571 ATP8A1Q9Y2Q0 1164 aa18.3■□□□□ 0.52
GTF3A-204ENST00000438571 ANKRD62A6NC57 917 aa18.29■□□□□ 0.52
GTF3A-204ENST00000438571 LRRC10BA6NIK2 292 aa18.29■□□□□ 0.52
GTF3A-204ENST00000438571 TK2O00142 265 aa18.29■□□□□ 0.52
GTF3A-204ENST00000438571 EEF2KO00418 725 aaKnown RBP18.29■□□□□ 0.52
GTF3A-204ENST00000438571 NTN3O00634 580 aaPredicted RBP18.29■□□□□ 0.52
GTF3A-204ENST00000438571 FERP16591 822 aa18.29■□□□□ 0.52
GTF3A-204ENST00000438571 TMPRSS3P57727 454 aa18.29■□□□□ 0.52
GTF3A-204ENST00000438571 C19orf57Q0VDD7 668 aa18.29■□□□□ 0.52
GTF3A-204ENST00000438571 MAMLD1Q13495 774 aa18.29■□□□□ 0.52
GTF3A-204ENST00000438571 IGF2-ASQ6U949 168 aa18.29■□□□□ 0.52
GTF3A-204ENST00000438571 SDR16C5Q8N3Y7 309 aa18.29■□□□□ 0.52
GTF3A-204ENST00000438571 ARL10Q8N8L6 244 aa18.29■□□□□ 0.52
GTF3A-204ENST00000438571 ANKRD20A12PQ8NF67 263 aa18.29■□□□□ 0.52
GTF3A-204ENST00000438571 GLMNQ92990 594 aa18.29■□□□□ 0.52
GTF3A-204ENST00000438571 NAT6Q93015 286 aa18.29■□□□□ 0.52
GTF3A-204ENST00000438571 SLC46A1Q96NT5 459 aa18.29■□□□□ 0.52
GTF3A-204ENST00000438571 SEMA4CQ9C0C4 833 aa18.29■□□□□ 0.52
GTF3A-204ENST00000438571 MRPL40Q9NQ50 206 aaKnown RBP18.29■□□□□ 0.52
GTF3A-204ENST00000438571 DOLKQ9UPQ8 538 aa18.29■□□□□ 0.52
GTF3A-204ENST00000438571 AHCTF1Q8WYP5 2266 aa18.29■□□□□ 0.52
GTF3A-204ENST00000438571 A0A1W2PQM1 296 aa18.28■□□□□ 0.52
GTF3A-204ENST00000438571 TTC24A2A3L6 582 aaPredicted RBP18.28■□□□□ 0.52
GTF3A-204ENST00000438571 CDRT15L2A8MXV6 281 aa18.28■□□□□ 0.52
GTF3A-204ENST00000438571 TOR1BO14657 336 aa18.28■□□□□ 0.52
GTF3A-204ENST00000438571 TCEA3O75764 348 aa18.28■□□□□ 0.52
GTF3A-204ENST00000438571 RASGRP1O95267 797 aa18.28■□□□□ 0.52
GTF3A-204ENST00000438571 ERCC2P18074 760 aa18.28■□□□□ 0.52
GTF3A-204ENST00000438571 CDK11BP21127 795 aaKnown RBP18.28■□□□□ 0.52
GTF3A-204ENST00000438571 RPIAP49247 311 aa18.28■□□□□ 0.52
GTF3A-204ENST00000438571 PEX5P50542 639 aa18.28■□□□□ 0.52
GTF3A-204ENST00000438571 NDST2P52849 883 aa18.28■□□□□ 0.52
GTF3A-204ENST00000438571 SRP54P61011 504 aaKnown RBP18.28■□□□□ 0.52
GTF3A-204ENST00000438571 SPIDRQ14159 915 aa18.28■□□□□ 0.52
GTF3A-204ENST00000438571 AFMIDQ63HM1 303 aa18.28■□□□□ 0.52
GTF3A-204ENST00000438571 PLEKHA7Q6IQ23 1121 aa18.28■□□□□ 0.52
GTF3A-204ENST00000438571 ESRP1Q6NXG1 681 aaKnown RBP18.28■□□□□ 0.52
GTF3A-204ENST00000438571 SRLQ86TD4 932 aa18.28■□□□□ 0.52
GTF3A-204ENST00000438571 FSTL5Q8N475 847 aaPredicted RBP18.28■□□□□ 0.52
GTF3A-204ENST00000438571 OR1E3Q8WZA6 343 aa18.28■□□□□ 0.52
GTF3A-204ENST00000438571 FGF22Q9HCT0 170 aa18.28■□□□□ 0.52
GTF3A-204ENST00000438571 KLQ9UEF7 1012 aa18.28■□□□□ 0.52
GTF3A-204ENST00000438571 PCDHGA8Q9Y5G5 932 aa18.28■□□□□ 0.52
GTF3A-204ENST00000438571 SDK2Q58EX2 2172 aa18.27■□□□□ 0.52
GTF3A-204ENST00000438571 TMEM202A6NGA9 273 aa18.27■□□□□ 0.52
GTF3A-204ENST00000438571 LRRC53A6NM62 1247 aa18.27■□□□□ 0.52
GTF3A-204ENST00000438571 CTSEP14091 401 aa18.27■□□□□ 0.52
GTF3A-204ENST00000438571 TNFAIP3P21580 790 aa18.27■□□□□ 0.52
GTF3A-204ENST00000438571 RBMS1P29558 406 aaKnown RBP18.27■□□□□ 0.52
GTF3A-204ENST00000438571 SUOXP51687 545 aa18.27■□□□□ 0.52
GTF3A-204ENST00000438571 CCL7P80098 99 aa18.27■□□□□ 0.52
GTF3A-204ENST00000438571 CFAP58Q5T655 872 aa18.27■□□□□ 0.52
GTF3A-204ENST00000438571 BROXQ5VW32 411 aa18.27■□□□□ 0.52
GTF3A-204ENST00000438571 ERAP2Q6P179 960 aa18.27■□□□□ 0.52
GTF3A-204ENST00000438571 BRAT1Q6PJG6 821 aa18.27■□□□□ 0.52
GTF3A-204ENST00000438571 RFX8Q6ZV50 586 aa18.27■□□□□ 0.52
GTF3A-204ENST00000438571 TPCN2Q8NHX9 752 aa18.27■□□□□ 0.52
GTF3A-204ENST00000438571 ECHDC3Q96DC8 303 aa18.27■□□□□ 0.52
GTF3A-204ENST00000438571 WDR92Q96MX6 357 aa18.27■□□□□ 0.52
GTF3A-204ENST00000438571 ZNF641Q96N77 438 aaPredicted RBP18.27■□□□□ 0.52
GTF3A-204ENST00000438571 CINPQ9BW66 212 aaPredicted RBP18.27■□□□□ 0.52
GTF3A-204ENST00000438571 FOXP3Q9BZS1 431 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms