RNA–Protein interactions for RNA: ENST00000438412.5

HCG18-236, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,440 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-236ENST00000438412 MYLK4Q86YV6 388 aaPredicted RBP12.77□□□□□ -0.37
HCG18-236ENST00000438412 DENND1CQ8IV53 801 aa12.77□□□□□ -0.37
HCG18-236ENST00000438412 KDM1BQ8NB78 822 aa12.77□□□□□ -0.37
HCG18-236ENST00000438412 MICAL1Q8TDZ2 1067 aa12.77□□□□□ -0.37
HCG18-236ENST00000438412 RCN3Q96D15 328 aa12.77□□□□□ -0.37
HCG18-236ENST00000438412 FUBP3Q96I24 572 aaKnown RBP eCLIP12.77□□□□□ -0.37
HCG18-236ENST00000438412 VPS45Q9NRW7 570 aa12.77□□□□□ -0.37
HCG18-236ENST00000438412 PCDHB7Q9Y5E2 793 aa12.77□□□□□ -0.37
HCG18-236ENST00000438412 IGLV3-10A0A075B6K4 115 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 TMEM114B3SHH9 223 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 UBFD1O14562 309 aaKnown RBP12.76□□□□□ -0.37
HCG18-236ENST00000438412 CABYRO75952 493 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 CDH13P55290 713 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 HTRA3P83110 453 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 SERINC3Q13530 473 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 LBRQ14739 615 aaKnown RBP12.76□□□□□ -0.37
HCG18-236ENST00000438412 TRIP4Q15650 581 aaPredicted RBP12.76□□□□□ -0.37
HCG18-236ENST00000438412 ZNF549Q6P9A3 640 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 LINGO4Q6UY18 593 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 PTERQ96BW5 349 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 NPAS2Q99743 824 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 MRPL46Q9H2W6 279 aaKnown RBP12.76□□□□□ -0.37
HCG18-236ENST00000438412 TMEM161AQ9NX61 479 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 ZFP37Q9Y6Q3 630 aaPredicted RBP12.76□□□□□ -0.37
HCG18-236ENST00000438412 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.76□□□□□ -0.37
HCG18-236ENST00000438412 CCDC189A1A4V9 331 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 HEATR9A2RTY3 570 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 A8MT66 165 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 WASH4PA8MWX3 477 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 C9JVG2 144 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 TMEM189-UBE2V1I3L0A0 370 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 PSMD3O43242 534 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 CSPG5O95196 566 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 SIX3O95343 332 aaPredicted RBP12.76□□□□□ -0.37
HCG18-236ENST00000438412 GOT2P00505 430 aaKnown RBP12.76□□□□□ -0.37
HCG18-236ENST00000438412 KLKB1P03952 638 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 ALDH2P05091 517 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 TCN1P20061 433 aaPredicted RBP12.76□□□□□ -0.37
HCG18-236ENST00000438412 ATP6V1C1P21283 382 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 TACR2P21452 398 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 PSEN1P49768 467 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 NDST2P52849 883 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 PRAMEP78395 509 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 TIAL1Q01085 375 aaKnown RBP eCLIP12.76□□□□□ -0.37
HCG18-236ENST00000438412 TECRLQ5HYJ1 363 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 FAM117BQ6P1L5 589 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 ATP6V0D2Q8N8Y2 350 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 PRICKLE1Q96MT3 831 aaPredicted RBP12.76□□□□□ -0.37
HCG18-236ENST00000438412 DDX50Q9BQ39 737 aaKnown RBP12.76□□□□□ -0.37
HCG18-236ENST00000438412 SIKE1Q9BRV8 207 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 VN1R3Q9BXE9 311 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 PPP1R12CQ9BZL4 782 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 UBE2OQ9C0C9 1292 aaKnown RBP12.76□□□□□ -0.37
HCG18-236ENST00000438412 TLR8Q9NR97 1041 aaKnown RBP12.76□□□□□ -0.37
HCG18-236ENST00000438412 SMPD4Q9NXE4 827 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 TSR3Q9UJK0 312 aaKnown RBP12.76□□□□□ -0.37
HCG18-236ENST00000438412 ADAMTS6Q9UKP5 1117 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 POMPQ9Y244 141 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 SPO11Q9Y5K1 396 aa12.76□□□□□ -0.37
HCG18-236ENST00000438412 DOCK6Q96HP0 2047 aa12.75□□□□□ -0.37
HCG18-236ENST00000438412 A0A1B0GTL3 188 aa12.75□□□□□ -0.37
HCG18-236ENST00000438412 CCDC162PA2VCL2 907 aa12.75□□□□□ -0.37
HCG18-236ENST00000438412 S1PR4O95977 384 aa12.75□□□□□ -0.37
HCG18-236ENST00000438412 GALTP07902 379 aa12.75□□□□□ -0.37
HCG18-236ENST00000438412 FGFR3P22607 806 aa12.75□□□□□ -0.37
HCG18-236ENST00000438412 SULT2A1Q06520 285 aa12.75□□□□□ -0.37
HCG18-236ENST00000438412 UGP2Q16851 508 aa12.75□□□□□ -0.37
HCG18-236ENST00000438412 IZUMO2Q6UXV1 221 aa12.75□□□□□ -0.37
HCG18-236ENST00000438412 GK5Q6ZS86 529 aa12.75□□□□□ -0.37
HCG18-236ENST00000438412 ARHGAP24Q8N264 748 aa12.75□□□□□ -0.37
HCG18-236ENST00000438412 MYCBPQ99417 103 aaPredicted RBP12.75□□□□□ -0.37
HCG18-236ENST00000438412 NACA2Q9H009 215 aa12.75□□□□□ -0.37
HCG18-236ENST00000438412 C1orf21Q9H246 121 aa12.75□□□□□ -0.37
HCG18-236ENST00000438412 ANKRD6Q9Y2G4 727 aa12.75□□□□□ -0.37
HCG18-236ENST00000438412 COPG1Q9Y678 874 aaKnown RBP12.75□□□□□ -0.37
HCG18-236ENST00000438412 ANKRD36A6QL64 1941 aa12.75□□□□□ -0.37
HCG18-236ENST00000438412 FAM92AA1XBS5 289 aa12.74□□□□□ -0.37
HCG18-236ENST00000438412 MROH6A6NGR9 719 aa12.74□□□□□ -0.37
HCG18-236ENST00000438412 SLC38A8A6NNN8 435 aa12.74□□□□□ -0.37
HCG18-236ENST00000438412 SYN3O14994 580 aa12.74□□□□□ -0.37
HCG18-236ENST00000438412 ENO3P13929 434 aaPredicted RBP12.74□□□□□ -0.37
HCG18-236ENST00000438412 SELPP16109 830 aa12.74□□□□□ -0.37
HCG18-236ENST00000438412 PAMP19021 973 aa12.74□□□□□ -0.37
HCG18-236ENST00000438412 PAX7P23759 505 aa12.74□□□□□ -0.37
HCG18-236ENST00000438412 HOXD9P28356 352 aaPredicted RBP12.74□□□□□ -0.37
HCG18-236ENST00000438412 OR1D2P34982 312 aa12.74□□□□□ -0.37
HCG18-236ENST00000438412 ZNF235Q14590 738 aa12.74□□□□□ -0.37
HCG18-236ENST00000438412 TBCCQ15814 346 aa12.74□□□□□ -0.37
HCG18-236ENST00000438412 TRMT5Q32P41 509 aaKnown RBP12.74□□□□□ -0.37
HCG18-236ENST00000438412 OR9I1Q8NGQ6 314 aa12.74□□□□□ -0.37
HCG18-236ENST00000438412 HMGCLL1Q8TB92 370 aa12.74□□□□□ -0.37
HCG18-236ENST00000438412 CMTM5Q96DZ9 223 aa12.74□□□□□ -0.37
HCG18-236ENST00000438412 ZNF512Q96ME7 567 aaPredicted RBP12.74□□□□□ -0.37
HCG18-236ENST00000438412 FAM96AQ9H5X1 160 aa12.74□□□□□ -0.37
HCG18-236ENST00000438412 STN1Q9H668 368 aaKnown RBP12.74□□□□□ -0.37
HCG18-236ENST00000438412 FBRSL1Q9HCM7 1045 aaKnown RBP12.74□□□□□ -0.37
HCG18-236ENST00000438412 CREBZFQ9NS37 354 aa12.74□□□□□ -0.37
HCG18-236ENST00000438412 IL37Q9NZH6 218 aa12.74□□□□□ -0.37
HCG18-236ENST00000438412 NCKIPSDQ9NZQ3 722 aa12.74□□□□□ -0.37
HCG18-236ENST00000438412 IKZF3Q9UKT9 509 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms