RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 SDR16C5Q8N3Y7 309 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 FBXO22Q8NEZ5 403 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 OR52K2Q8NGK3 314 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 HDAC10Q969S8 669 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 RPRD1AQ96P16 312 aaPredicted RBP9.54□□□□□ -0.88
CUX1-206ENST00000437600 TTPALQ9BTX7 342 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 KIFC1Q9BW19 673 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 VN1R3Q9BXE9 311 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 TCF7L2Q9NQB0 619 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 MARCH4Q9P2E8 410 aaPredicted RBP9.54□□□□□ -0.88
CUX1-206ENST00000437600 PRKAG2Q9UGJ0 569 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 FBXO5Q9UKT4 447 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 AAR2Q9Y312 384 aaKnown RBP9.54□□□□□ -0.88
CUX1-206ENST00000437600 PCDHB12Q9Y5F1 795 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 KCNU1A8MYU2 1149 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 TMEM189-UBE2V1I3L0A0 370 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 SYN3O14994 580 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 TIMM44O43615 452 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 WFS1O76024 890 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 IL1BP01584 269 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 STMN1P16949 149 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 NUDT2P50583 147 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 RPS6KA3P51812 740 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 NME5P56597 212 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 CBLBQ13191 982 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 GALNT3Q14435 633 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 PPP1R3AQ16821 1122 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 ANO4Q32M45 955 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 CCDC153Q494R4 210 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 MS4A13Q5J8X5 152 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 TSTD2Q5T7W7 516 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 CNKSR3Q6P9H4 555 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 EPGNQ6UW88 154 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 RANBP10Q6VN20 620 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 CLEC14AQ86T13 490 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 SNX32Q86XE0 403 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 LSMEM2Q8N112 164 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 BLOC1S5Q8TDH9 187 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 TBATAQ96M53 351 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 NACA2Q9H009 215 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 OSBPL2Q9H1P3 480 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 ARHGEF38Q9NXL2 777 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 RRN3Q9NYV6 651 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 GTSE1Q9NYZ3 720 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 MARCH2Q9P0N8 246 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 DLGAP2Q9P1A6 1054 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 UXTQ9UBK9 157 aaPredicted RBP9.54□□□□□ -0.88
CUX1-206ENST00000437600 ARL5AQ9Y689 179 aa9.54□□□□□ -0.88
CUX1-206ENST00000437600 MAGEB16A2A368 324 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 LRRC14BA6NHZ5 514 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 MUSKO15146 869 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 TLR5O60602 858 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 SMIM24O75264 130 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 CIB2O75838 187 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 CCDC166P0CW27 439 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 COX4I1P13073 169 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 BMP1P13497 986 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 ENO3P13929 434 aaPredicted RBP9.53□□□□□ -0.88
CUX1-206ENST00000437600 AOC1P19801 751 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 ITGAXP20702 1163 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 FGFR3P22607 806 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 GLDCP23378 1020 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 VHLP40337 213 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 KLF10Q13118 480 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 EIF4EBP2Q13542 120 aaPredicted RBP9.53□□□□□ -0.88
CUX1-206ENST00000437600 SH2D4BQ5SQS7 431 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 LAYNQ6UX15 382 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 IZUMO2Q6UXV1 221 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 PGBD5Q8N414 524 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 TXNDC5Q8NBS9 432 aaKnown RBP9.53□□□□□ -0.88
CUX1-206ENST00000437600 APBB2Q92870 758 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 ZNF512Q96ME7 567 aaPredicted RBP9.53□□□□□ -0.88
CUX1-206ENST00000437600 TSC22D3Q99576 134 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 GPR22Q99680 433 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 SPON2Q9BUD6 331 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 RHOJQ9H4E5 214 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 CATSPERBQ9H7T0 1116 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 GIMAP2Q9UG22 337 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 GRXCR1A8MXD5 290 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 KIAA0355O15063 1070 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 MTSS1O43312 755 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 GRID2O43424 1007 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 GJB5O95377 273 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 RPL14P50914 215 aaKnown RBP9.53□□□□□ -0.88
CUX1-206ENST00000437600 SLC12A2P55011 1212 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 ACTR3P61158 418 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 TBL3Q12788 808 aaKnown RBP9.53□□□□□ -0.88
CUX1-206ENST00000437600 MRPL58Q14197 206 aaKnown RBP9.53□□□□□ -0.88
CUX1-206ENST00000437600 INSCQ1MX18 579 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 MARC1Q5VT66 337 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 CLEC6AQ6EIG7 209 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 TMEM154Q6P9G4 183 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 PHC3Q8NDX5 983 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 FCRL5Q96RD9 977 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 CDRT15Q96T59 188 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 VAT1Q99536 393 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 IL12RB2Q99665 862 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 NPAS2Q99743 824 aa9.53□□□□□ -0.88
CUX1-206ENST00000437600 STX18Q9P2W9 335 aaKnown RBP9.53□□□□□ -0.88
CUX1-206ENST00000437600 CDH22Q9UJ99 828 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms