RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 LHX6Q9UPM6 363 aa17.68■□□□□ 0.42
SBDSP1-203ENST00000437201 RAXQ9Y2V3 346 aa17.68■□□□□ 0.42
SBDSP1-203ENST00000437201 GPSM3Q9Y4H4 160 aa17.68■□□□□ 0.42
SBDSP1-203ENST00000437201 A0A087X0T9 212 aa17.67■□□□□ 0.42
SBDSP1-203ENST00000437201 NEBLO76041 1014 aa17.67■□□□□ 0.42
SBDSP1-203ENST00000437201 MT-CO3P00414 261 aa17.67■□□□□ 0.42
SBDSP1-203ENST00000437201 FAM228BP0C875 321 aa17.67■□□□□ 0.42
SBDSP1-203ENST00000437201 RARAP10276 462 aa17.67■□□□□ 0.42
SBDSP1-203ENST00000437201 C6P13671 934 aa17.67■□□□□ 0.42
SBDSP1-203ENST00000437201 IL1R2P27930 398 aa17.67■□□□□ 0.42
SBDSP1-203ENST00000437201 MMP12P39900 470 aa17.67■□□□□ 0.42
SBDSP1-203ENST00000437201 KRT81Q14533 505 aa17.67■□□□□ 0.42
SBDSP1-203ENST00000437201 ZNF235Q14590 738 aa17.67■□□□□ 0.42
SBDSP1-203ENST00000437201 RTP5Q14D33 572 aa17.67■□□□□ 0.42
SBDSP1-203ENST00000437201 IRF4Q15306 451 aa17.67■□□□□ 0.42
SBDSP1-203ENST00000437201 PRRT3Q5FWE3 981 aa17.67■□□□□ 0.42
SBDSP1-203ENST00000437201 CCDC122Q5T0U0 273 aa17.67■□□□□ 0.42
SBDSP1-203ENST00000437201 LRRC49Q8IUZ0 686 aa17.67■□□□□ 0.42
SBDSP1-203ENST00000437201 PHACTR4Q8IZ21 702 aa17.67■□□□□ 0.42
SBDSP1-203ENST00000437201 SDR16C5Q8N3Y7 309 aa17.67■□□□□ 0.42
SBDSP1-203ENST00000437201 FSTL5Q8N475 847 aaPredicted RBP17.67■□□□□ 0.42
SBDSP1-203ENST00000437201 ECHDC3Q96DC8 303 aa17.67■□□□□ 0.42
SBDSP1-203ENST00000437201 CSPG4P5Q96PW8 444 aa17.67■□□□□ 0.42
SBDSP1-203ENST00000437201 MBNL1Q9NR56 388 aaKnown RBP17.67■□□□□ 0.42
SBDSP1-203ENST00000437201 RCOR3Q9P2K3 495 aaPredicted RBP17.67■□□□□ 0.42
SBDSP1-203ENST00000437201 KLF15Q9UIH9 416 aa17.67■□□□□ 0.42
SBDSP1-203ENST00000437201 GOLGA4Q13439 2230 aaKnown RBP17.67■□□□□ 0.42
SBDSP1-203ENST00000437201 ANKRD11Q6UB99 2663 aaPredicted RBP17.66■□□□□ 0.42
SBDSP1-203ENST00000437201 ZFHX4Q86UP3 3567 aa17.66■□□□□ 0.42
SBDSP1-203ENST00000437201 ARID1BQ8NFD5 2236 aaPredicted RBP17.66■□□□□ 0.42
SBDSP1-203ENST00000437201 LMO7DNF2Z398 122 aa17.66■□□□□ 0.42
SBDSP1-203ENST00000437201 CBFA2T2O43439 604 aa17.66■□□□□ 0.42
SBDSP1-203ENST00000437201 OPA1O60313 960 aa17.66■□□□□ 0.42
SBDSP1-203ENST00000437201 GYPCP04921 128 aa17.66■□□□□ 0.42
SBDSP1-203ENST00000437201 ANXA6P08133 673 aa17.66■□□□□ 0.42
SBDSP1-203ENST00000437201 AMPD1P23109 780 aa17.66■□□□□ 0.42
SBDSP1-203ENST00000437201 SSR1P43307 286 aaKnown RBP17.66■□□□□ 0.42
SBDSP1-203ENST00000437201 RGRP47804 291 aa17.66■□□□□ 0.42
SBDSP1-203ENST00000437201 CLDN6P56747 220 aa17.66■□□□□ 0.42
SBDSP1-203ENST00000437201 ELOCQ15369 112 aa17.66■□□□□ 0.42
SBDSP1-203ENST00000437201 WSCD2Q2TBF2 565 aa17.66■□□□□ 0.42
SBDSP1-203ENST00000437201 ZSCAN23Q3MJ62 389 aa17.66■□□□□ 0.42
SBDSP1-203ENST00000437201 RALGPS1Q5JS13 557 aa17.66■□□□□ 0.42
SBDSP1-203ENST00000437201 TPRG1LQ5T0D9 272 aa17.66■□□□□ 0.42
SBDSP1-203ENST00000437201 ARHGAP36Q6ZRI8 547 aa17.66■□□□□ 0.42
SBDSP1-203ENST00000437201 ATPAF2Q8N5M1 289 aa17.66■□□□□ 0.42
SBDSP1-203ENST00000437201 TPCN2Q8NHX9 752 aa17.66■□□□□ 0.42
SBDSP1-203ENST00000437201 DEPDC7Q96QD5 511 aa17.66■□□□□ 0.42
SBDSP1-203ENST00000437201 KCTD5Q9NXV2 234 aa17.66■□□□□ 0.42
SBDSP1-203ENST00000437201 DOLKQ9UPQ8 538 aa17.66■□□□□ 0.42
SBDSP1-203ENST00000437201 COQ6Q9Y2Z9 468 aa17.66■□□□□ 0.42
SBDSP1-203ENST00000437201 DSPP15924 2871 aaKnown RBP17.65■□□□□ 0.42
SBDSP1-203ENST00000437201 SOCS5O75159 536 aa17.65■□□□□ 0.42
SBDSP1-203ENST00000437201 ALPIP09923 528 aa17.65■□□□□ 0.42
SBDSP1-203ENST00000437201 ELFN1P0C7U0 828 aa17.65■□□□□ 0.42
SBDSP1-203ENST00000437201 CTSEP14091 401 aa17.65■□□□□ 0.42
SBDSP1-203ENST00000437201 HNRNPH3P31942 346 aaKnown RBP17.65■□□□□ 0.42
SBDSP1-203ENST00000437201 CASP14P31944 242 aa17.65■□□□□ 0.42
SBDSP1-203ENST00000437201 CDH6P55285 790 aa17.65■□□□□ 0.42
SBDSP1-203ENST00000437201 SLC10A7Q0GE19 358 aa17.65■□□□□ 0.42
SBDSP1-203ENST00000437201 MTM1Q13496 603 aa17.65■□□□□ 0.42
SBDSP1-203ENST00000437201 TRIM14Q14142 442 aa17.65■□□□□ 0.42
SBDSP1-203ENST00000437201 INPP5AQ14642 412 aa17.65■□□□□ 0.42
SBDSP1-203ENST00000437201 NFATC4Q14934 902 aa17.65■□□□□ 0.42
SBDSP1-203ENST00000437201 NR0B2Q15466 257 aa17.65■□□□□ 0.42
SBDSP1-203ENST00000437201 TSR1Q2NL82 804 aaKnown RBP17.65■□□□□ 0.42
SBDSP1-203ENST00000437201 DEFB133Q30KQ1 61 aa17.65■□□□□ 0.42
SBDSP1-203ENST00000437201 ESRP1Q6NXG1 681 aaKnown RBP17.65■□□□□ 0.42
SBDSP1-203ENST00000437201 LVRNQ6Q4G3 990 aa17.65■□□□□ 0.42
SBDSP1-203ENST00000437201 IFI44Q8TCB0 444 aa17.65■□□□□ 0.42
SBDSP1-203ENST00000437201 MAPK15Q8TD08 544 aa17.65■□□□□ 0.42
SBDSP1-203ENST00000437201 SPOCK2Q92563 424 aa17.65■□□□□ 0.42
SBDSP1-203ENST00000437201 NAT6Q93015 286 aa17.65■□□□□ 0.42
SBDSP1-203ENST00000437201 APOOQ9BUR5 198 aa17.65■□□□□ 0.42
SBDSP1-203ENST00000437201 PCDH18Q9HCL0 1135 aa17.65■□□□□ 0.42
SBDSP1-203ENST00000437201 HAUS2Q9NVX0 235 aa17.65■□□□□ 0.42
SBDSP1-203ENST00000437201 ZNHIT6Q9NWK9 470 aaKnown RBP17.65■□□□□ 0.42
SBDSP1-203ENST00000437201 KNTC1P50748 2209 aa17.65■□□□□ 0.42
SBDSP1-203ENST00000437201 PKD1L2Q7Z442 2459 aa17.64■□□□□ 0.42
SBDSP1-203ENST00000437201 A0A087WV48 116 aa17.64■□□□□ 0.41
SBDSP1-203ENST00000437201 TRAFD1O14545 582 aaPredicted RBP17.64■□□□□ 0.41
SBDSP1-203ENST00000437201 RASGRP1O95267 797 aa17.64■□□□□ 0.41
SBDSP1-203ENST00000437201 TPM1P09493 284 aa17.64■□□□□ 0.41
SBDSP1-203ENST00000437201 KELP23276 732 aa17.64■□□□□ 0.41
SBDSP1-203ENST00000437201 HK3P52790 923 aa17.64■□□□□ 0.41
SBDSP1-203ENST00000437201 ADKP55263 362 aaKnown RBP17.64■□□□□ 0.41
SBDSP1-203ENST00000437201 SEMG2Q02383 582 aa17.64■□□□□ 0.41
SBDSP1-203ENST00000437201 SLC25A11Q02978 314 aaKnown RBP17.64■□□□□ 0.41
SBDSP1-203ENST00000437201 MARC1Q5VT66 337 aa17.64■□□□□ 0.41
SBDSP1-203ENST00000437201 CDCP2Q5VXM1 449 aa17.64■□□□□ 0.41
SBDSP1-203ENST00000437201 KDM7AQ6ZMT4 941 aa17.64■□□□□ 0.41
SBDSP1-203ENST00000437201 DPPA4Q7L190 304 aa17.64■□□□□ 0.41
SBDSP1-203ENST00000437201 ZSWIM9Q86XI8 627 aa17.64■□□□□ 0.41
SBDSP1-203ENST00000437201 MAP7D3Q8IWC1 876 aa17.64■□□□□ 0.41
SBDSP1-203ENST00000437201 RBFAQ8N0V3 343 aa17.64■□□□□ 0.41
SBDSP1-203ENST00000437201 ZNF564Q8TBZ8 553 aaPredicted RBP17.64■□□□□ 0.41
SBDSP1-203ENST00000437201 CTNNBL1Q8WYA6 563 aaPredicted RBP17.64■□□□□ 0.41
SBDSP1-203ENST00000437201 GRAMD1AQ96CP6 724 aa17.64■□□□□ 0.41
SBDSP1-203ENST00000437201 NUDCD1Q96RS6 583 aa17.64■□□□□ 0.41
SBDSP1-203ENST00000437201 BOCQ9BWV1 1114 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms