RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 NAT9Q9BTE0 207 aa26.64■■□□□ 1.85
TMEM248-205ENST00000433271 CDC42EP4Q9H3Q1 356 aaKnown RBP26.64■■□□□ 1.85
TMEM248-205ENST00000433271 SAMD15Q9P1V8 674 aa26.64■■□□□ 1.85
TMEM248-205ENST00000433271 CHMP2BQ9UQN3 213 aa26.64■■□□□ 1.85
TMEM248-205ENST00000433271 MAD1L1Q9Y6D9 718 aa26.64■■□□□ 1.85
TMEM248-205ENST00000433271 RNF40O75150 1001 aa26.63■■□□□ 1.85
TMEM248-205ENST00000433271 KLF8O95600 359 aaPredicted RBP26.63■■□□□ 1.85
TMEM248-205ENST00000433271 KYNUQ16719 465 aa26.63■■□□□ 1.85
TMEM248-205ENST00000433271 ZNF805Q5CZA5 627 aa26.63■■□□□ 1.85
TMEM248-205ENST00000433271 BRAT1Q6PJG6 821 aa26.63■■□□□ 1.85
TMEM248-205ENST00000433271 CCNJLQ8IV13 435 aa26.63■■□□□ 1.85
TMEM248-205ENST00000433271 ZNF687Q8N1G0 1237 aa26.63■■□□□ 1.85
TMEM248-205ENST00000433271 TTC25Q96NG3 672 aa26.63■■□□□ 1.85
TMEM248-205ENST00000433271 DKK3Q9UBP4 350 aa26.63■■□□□ 1.85
TMEM248-205ENST00000433271 PHTF1Q9UMS5 762 aa26.63■■□□□ 1.85
TMEM248-205ENST00000433271 ADAM23O75077 832 aa26.62■■□□□ 1.85
TMEM248-205ENST00000433271 TTC4O95801 387 aa26.62■■□□□ 1.85
TMEM248-205ENST00000433271 SLC8A1P32418 973 aa26.62■■□□□ 1.85
TMEM248-205ENST00000433271 POLR2LP62875 67 aaKnown RBP26.62■■□□□ 1.85
TMEM248-205ENST00000433271 POU6F1Q14863 301 aa26.62■■□□□ 1.85
TMEM248-205ENST00000433271 PCID2Q5JVF3 399 aa26.62■■□□□ 1.85
TMEM248-205ENST00000433271 SPDYCQ5MJ68 293 aa26.62■■□□□ 1.85
TMEM248-205ENST00000433271 ZSWIM9Q86XI8 627 aa26.62■■□□□ 1.85
TMEM248-205ENST00000433271 TXNDC5Q8NBS9 432 aaKnown RBP26.62■■□□□ 1.85
TMEM248-205ENST00000433271 PABPC3Q9H361 631 aaKnown RBP26.62■■□□□ 1.85
TMEM248-205ENST00000433271 NINJ2Q9NZG7 142 aa26.62■■□□□ 1.85
TMEM248-205ENST00000433271 ZC3H7BQ9UGR2 993 aaKnown RBP26.62■■□□□ 1.85
TMEM248-205ENST00000433271 TRIOO75962 3097 aa26.62■■□□□ 1.85
TMEM248-205ENST00000433271 CHRNB1P11230 501 aa26.61■■□□□ 1.85
TMEM248-205ENST00000433271 STARD3Q14849 445 aa26.61■■□□□ 1.85
TMEM248-205ENST00000433271 PALM2Q8IXS6 379 aa26.61■■□□□ 1.85
TMEM248-205ENST00000433271 SYNPOQ8N3V7 929 aa26.61■■□□□ 1.85
TMEM248-205ENST00000433271 PTCD2Q8WV60 388 aaKnown RBP26.61■■□□□ 1.85
TMEM248-205ENST00000433271 RANBP9Q96S59 729 aa26.61■■□□□ 1.85
TMEM248-205ENST00000433271 LRRC4CQ9HCJ2 640 aa26.61■■□□□ 1.85
TMEM248-205ENST00000433271 SARDHQ9UL12 918 aa26.61■■□□□ 1.85
TMEM248-205ENST00000433271 ATG2BQ96BY7 2078 aa26.61■■□□□ 1.85
TMEM248-205ENST00000433271 TSPAN11A1L157 253 aa26.61■■□□□ 1.85
TMEM248-205ENST00000433271 ADRA1DP25100 572 aa26.61■■□□□ 1.85
TMEM248-205ENST00000433271 NDUFAF2Q8N183 169 aa26.61■■□□□ 1.85
TMEM248-205ENST00000433271 SIX5Q8N196 739 aa26.61■■□□□ 1.85
TMEM248-205ENST00000433271 RPLP0P6Q8NHW5 317 aa26.61■■□□□ 1.85
TMEM248-205ENST00000433271 PIP4K2CQ8TBX8 421 aa26.61■■□□□ 1.85
TMEM248-205ENST00000433271 BRSK1Q8TDC3 778 aa26.61■■□□□ 1.85
TMEM248-205ENST00000433271 NELL2Q99435 816 aa26.61■■□□□ 1.85
TMEM248-205ENST00000433271 KIFC1Q9BW19 673 aa26.61■■□□□ 1.85
TMEM248-205ENST00000433271 CD320Q9NPF0 282 aa26.61■■□□□ 1.85
TMEM248-205ENST00000433271 MUTYHQ9UIF7 546 aa26.61■■□□□ 1.85
TMEM248-205ENST00000433271 PPIL1Q9Y3C6 166 aa26.61■■□□□ 1.85
TMEM248-205ENST00000433271 CKAP5Q14008 2032 aa26.6■■□□□ 1.85
TMEM248-205ENST00000433271 A0A0J9YYE9 177 aa26.6■■□□□ 1.85
TMEM248-205ENST00000433271 KANSL1LA0AUZ9 987 aa26.6■■□□□ 1.85
TMEM248-205ENST00000433271 TRBC1P01850 177 aa26.6■■□□□ 1.85
TMEM248-205ENST00000433271 TSHRP16473 764 aa26.6■■□□□ 1.85
TMEM248-205ENST00000433271 PGAM1P18669 254 aa26.6■■□□□ 1.85
TMEM248-205ENST00000433271 HSD17B3P37058 310 aa26.6■■□□□ 1.85
TMEM248-205ENST00000433271 PPHLN1Q8NEY8 458 aaKnown RBP26.6■■□□□ 1.85
TMEM248-205ENST00000433271 BLOC1S5Q8TDH9 187 aa26.6■■□□□ 1.85
TMEM248-205ENST00000433271 UBLCP1Q8WVY7 318 aaPredicted RBP26.6■■□□□ 1.85
TMEM248-205ENST00000433271 SRPK1Q96SB4 655 aaKnown RBP26.6■■□□□ 1.85
TMEM248-205ENST00000433271 RSPH9Q9H1X1 276 aaPredicted RBP26.6■■□□□ 1.85
TMEM248-205ENST00000433271 FBRSQ9HAH7 460 aa26.6■■□□□ 1.85
TMEM248-205ENST00000433271 MAGEE1Q9HCI5 957 aa26.6■■□□□ 1.85
TMEM248-205ENST00000433271 LTB4R2Q9NPC1 389 aa26.6■■□□□ 1.85
TMEM248-205ENST00000433271 SOX13Q9UN79 622 aa26.6■■□□□ 1.85
TMEM248-205ENST00000433271 TCAF1Q9Y4C2 921 aa26.6■■□□□ 1.85
TMEM248-205ENST00000433271 DYNC1LI1Q9Y6G9 523 aaKnown RBP26.6■■□□□ 1.85
TMEM248-205ENST00000433271 FAM237BA0A1B0GVD1 139 aa26.59■■□□□ 1.85
TMEM248-205ENST00000433271 HEATR9A2RTY3 570 aa26.59■■□□□ 1.85
TMEM248-205ENST00000433271 KPNA3O00505 521 aaPredicted RBP26.59■■□□□ 1.85
TMEM248-205ENST00000433271 RIPK2O43353 540 aa26.59■■□□□ 1.85
TMEM248-205ENST00000433271 RNASEH1O60930 286 aaKnown RBP26.59■■□□□ 1.85
TMEM248-205ENST00000433271 IL1BP01584 269 aa26.59■■□□□ 1.85
TMEM248-205ENST00000433271 PIRTP0C851 137 aa26.59■■□□□ 1.85
TMEM248-205ENST00000433271 HOXB2P14652 356 aa26.59■■□□□ 1.85
TMEM248-205ENST00000433271 TARSP26639 723 aaKnown RBP26.59■■□□□ 1.85
TMEM248-205ENST00000433271 LAMB3Q13751 1172 aa26.59■■□□□ 1.85
TMEM248-205ENST00000433271 LRRC32Q14392 662 aa26.59■■□□□ 1.85
TMEM248-205ENST00000433271 UAP1Q16222 522 aaPredicted RBP26.59■■□□□ 1.85
TMEM248-205ENST00000433271 EOGTQ5NDL2 527 aa26.59■■□□□ 1.85
TMEM248-205ENST00000433271 PKN3Q6P5Z2 889 aa26.59■■□□□ 1.85
TMEM248-205ENST00000433271 MMAAQ8IVH4 418 aaKnown RBP26.59■■□□□ 1.85
TMEM248-205ENST00000433271 SCRN2Q96FV2 425 aa26.59■■□□□ 1.85
TMEM248-205ENST00000433271 EPB41L4BQ9H329 900 aa26.59■■□□□ 1.85
TMEM248-205ENST00000433271 MRM3Q9HC36 420 aaKnown RBP26.59■■□□□ 1.85
TMEM248-205ENST00000433271 CHRAC1Q9NRG0 131 aa26.59■■□□□ 1.85
TMEM248-205ENST00000433271 HACD3Q9P035 362 aa26.59■■□□□ 1.85
TMEM248-205ENST00000433271 A0A1W2PQF6 199 aa26.58■■□□□ 1.85
TMEM248-205ENST00000433271 C1QTNF3-AMACRE9PGA6 284 aa26.58■■□□□ 1.85
TMEM248-205ENST00000433271 ACSL3O95573 720 aa26.58■■□□□ 1.85
TMEM248-205ENST00000433271 POLBP06746 335 aa26.58■■□□□ 1.85
TMEM248-205ENST00000433271 UGP2Q16851 508 aa26.58■■□□□ 1.85
TMEM248-205ENST00000433271 FAM46CQ5VWP2 391 aa26.58■■□□□ 1.85
TMEM248-205ENST00000433271 KIAA1211LQ6NV74 962 aa26.58■■□□□ 1.85
TMEM248-205ENST00000433271 C3orf62Q6ZUJ4 267 aa26.58■■□□□ 1.85
TMEM248-205ENST00000433271 TMEM135Q86UB9 458 aa26.58■■□□□ 1.85
TMEM248-205ENST00000433271 OR2T3Q8NH03 318 aa26.58■■□□□ 1.85
TMEM248-205ENST00000433271 CFAP36Q96G28 342 aa26.58■■□□□ 1.85
TMEM248-205ENST00000433271 PPP1R16AQ96I34 528 aa26.58■■□□□ 1.85
TMEM248-205ENST00000433271 SMIM14Q96QK8 99 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms