RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 TRPV5Q9NQA5 729 aa18.37■□□□□ 0.53
HMGN1-206ENST00000431390 CHKBQ9Y259 395 aa18.37■□□□□ 0.53
HMGN1-206ENST00000431390 TCAF1Q9Y4C2 921 aa18.37■□□□□ 0.53
HMGN1-206ENST00000431390 PCDHGC4Q9Y5F7 938 aa18.37■□□□□ 0.53
HMGN1-206ENST00000431390 RPS6KL1Q9Y6S9 549 aa18.37■□□□□ 0.53
HMGN1-206ENST00000431390 COL4A2P08572 1712 aa18.36■□□□□ 0.53
HMGN1-206ENST00000431390 PTPRZ1P23471 2315 aaPredicted RBP18.36■□□□□ 0.53
HMGN1-206ENST00000431390 EXOC1LA0A1B0GW35 172 aa18.36■□□□□ 0.53
HMGN1-206ENST00000431390 RASGRF2O14827 1237 aa18.36■□□□□ 0.53
HMGN1-206ENST00000431390 FZD6O60353 706 aa18.36■□□□□ 0.53
HMGN1-206ENST00000431390 ALDH1A2O94788 518 aa18.36■□□□□ 0.53
HMGN1-206ENST00000431390 SYF2O95926 243 aaKnown RBP18.36■□□□□ 0.53
HMGN1-206ENST00000431390 PRLP01236 227 aa18.36■□□□□ 0.53
HMGN1-206ENST00000431390 MYZAPP0CAP1 466 aa18.36■□□□□ 0.53
HMGN1-206ENST00000431390 PRKCHP24723 683 aa18.36■□□□□ 0.53
HMGN1-206ENST00000431390 ST8SIA6P61647 398 aa18.36■□□□□ 0.53
HMGN1-206ENST00000431390 RAD51Q06609 339 aa18.36■□□□□ 0.53
HMGN1-206ENST00000431390 BCL2L1Q07817 233 aa18.36■□□□□ 0.53
HMGN1-206ENST00000431390 MESP2Q0VG99 397 aa18.36■□□□□ 0.53
HMGN1-206ENST00000431390 LAMB3Q13751 1172 aa18.36■□□□□ 0.53
HMGN1-206ENST00000431390 POU6F1Q14863 301 aa18.36■□□□□ 0.53
HMGN1-206ENST00000431390 MYLK3Q32MK0 819 aa18.36■□□□□ 0.53
HMGN1-206ENST00000431390 PKN3Q6P5Z2 889 aa18.36■□□□□ 0.53
HMGN1-206ENST00000431390 NUDT18Q6ZVK8 323 aa18.36■□□□□ 0.53
HMGN1-206ENST00000431390 TTC8Q8TAM2 541 aa18.36■□□□□ 0.53
HMGN1-206ENST00000431390 FRS2Q8WU20 508 aa18.36■□□□□ 0.53
HMGN1-206ENST00000431390 UCMAQ8WVF2 138 aa18.36■□□□□ 0.53
HMGN1-206ENST00000431390 SORCS1Q8WY21 1168 aa18.36■□□□□ 0.53
HMGN1-206ENST00000431390 CHFRQ96EP1 664 aa18.36■□□□□ 0.53
HMGN1-206ENST00000431390 CPEB1Q9BZB8 566 aaKnown RBP18.36■□□□□ 0.53
HMGN1-206ENST00000431390 ATP13A3Q9H7F0 1226 aa18.36■□□□□ 0.53
HMGN1-206ENST00000431390 TMBIM4Q9HC24 238 aa18.36■□□□□ 0.53
HMGN1-206ENST00000431390 MOCS1Q9NZB8 636 aa18.36■□□□□ 0.53
HMGN1-206ENST00000431390 HECAQ9UBI9 543 aaPredicted RBP18.36■□□□□ 0.53
HMGN1-206ENST00000431390 PLA2G4CQ9UP65 541 aa18.36■□□□□ 0.53
HMGN1-206ENST00000431390 HEATR9A2RTY3 570 aa18.35■□□□□ 0.53
HMGN1-206ENST00000431390 WASH3PC4AMC7 463 aa18.35■□□□□ 0.53
HMGN1-206ENST00000431390 HTRA2O43464 458 aaPredicted RBP18.35■□□□□ 0.53
HMGN1-206ENST00000431390 POP4O95707 220 aaKnown RBP18.35■□□□□ 0.53
HMGN1-206ENST00000431390 GRIA2P42262 883 aa18.35■□□□□ 0.53
HMGN1-206ENST00000431390 RECQLP46063 649 aaPredicted RBP18.35■□□□□ 0.53
HMGN1-206ENST00000431390 RPL26P61254 145 aaKnown RBP18.35■□□□□ 0.53
HMGN1-206ENST00000431390 GALNT3Q14435 633 aa18.35■□□□□ 0.53
HMGN1-206ENST00000431390 ANKRD20A4Q4UJ75 823 aa18.35■□□□□ 0.53
HMGN1-206ENST00000431390 TDRPQ86YL5 185 aa18.35■□□□□ 0.53
HMGN1-206ENST00000431390 RIBC1Q8N443 379 aaPredicted RBP18.35■□□□□ 0.53
HMGN1-206ENST00000431390 RYBPQ8N488 228 aaPredicted RBP18.35■□□□□ 0.53
HMGN1-206ENST00000431390 TRIM56Q9BRZ2 755 aaKnown RBP18.35■□□□□ 0.53
HMGN1-206ENST00000431390 CHRAC1Q9NRG0 131 aa18.35■□□□□ 0.53
HMGN1-206ENST00000431390 SLC24A2Q9UI40 661 aa18.35■□□□□ 0.53
HMGN1-206ENST00000431390 RPL26L1Q9UNX3 145 aaKnown RBP18.35■□□□□ 0.53
HMGN1-206ENST00000431390 FAM169AQ9Y6X4 670 aa18.35■□□□□ 0.53
HMGN1-206ENST00000431390 FAM186AA6NE01 2351 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 TBC1D3BA6NDS4 549 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 GOLGA8KD6RF30 607 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 TRAFD1O14545 582 aaPredicted RBP18.34■□□□□ 0.53
HMGN1-206ENST00000431390 PGLSO95336 258 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 C1QAP02745 245 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 APODP05090 189 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 SERPINA4P29622 427 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 CCNHP51946 323 aaPredicted RBP18.34■□□□□ 0.53
HMGN1-206ENST00000431390 RASA2Q15283 850 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 LONRF1Q17RB8 773 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 ARMC12Q5T9G4 340 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 CWF19L1Q69YN2 538 aaKnown RBP18.34■□□□□ 0.53
HMGN1-206ENST00000431390 DPY19L3Q6ZPD9 716 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 Q6ZVU0 165 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.34■□□□□ 0.53
HMGN1-206ENST00000431390 FLCNQ8NFG4 579 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 OR6K2Q8NGY2 324 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 EPS8L3Q8TE67 593 aaKnown RBP18.34■□□□□ 0.53
HMGN1-206ENST00000431390 ZNF669Q96BR6 464 aaPredicted RBP18.34■□□□□ 0.53
HMGN1-206ENST00000431390 RMDN1Q96DB5 314 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 KCNK12Q9HB15 430 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 ZCWPW2A0A1B0GU75 182 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 TTC34A8MYJ7 566 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 ANKRD66B4E2M5 251 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 CDH16O75309 829 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 KAT7O95251 611 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 PAPSS2O95340 614 aaPredicted RBP18.34■□□□□ 0.53
HMGN1-206ENST00000431390 PDHA1P08559 390 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 GRIA4P48058 902 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 E2F5Q15329 346 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 KBTBD12Q3ZCT8 623 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 NLRP9Q7RTR0 991 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 LPCAT1Q8NF37 534 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 OR2A12Q8NGT7 310 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 BRSK1Q8TDC3 778 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 SPOCK2Q92563 424 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 DNASE1L2Q92874 299 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 PEX13Q92968 403 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 PGM2Q96G03 612 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 ZNF641Q96N77 438 aaPredicted RBP18.34■□□□□ 0.53
HMGN1-206ENST00000431390 FCRL3Q96P31 734 aaPredicted RBP18.34■□□□□ 0.53
HMGN1-206ENST00000431390 VPS18Q9P253 973 aa18.34■□□□□ 0.53
HMGN1-206ENST00000431390 VPS13AQ96RL7 3174 aa18.33■□□□□ 0.53
HMGN1-206ENST00000431390 SPTBN4Q9H254 2564 aa18.33■□□□□ 0.53
HMGN1-206ENST00000431390 A0A1W2PQ67 120 aa18.33■□□□□ 0.52
HMGN1-206ENST00000431390 FAM159BA6NKW6 160 aa18.33■□□□□ 0.52
HMGN1-206ENST00000431390 PIGNO95427 931 aa18.33■□□□□ 0.52
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