RNA–Protein interactions for RNA: ENST00000431120.1

GCSHP3-201, Transcript of glycine cleavage system protein H pseudogene 3, humanhuman

BASIC

Gene GCSHP3, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP3-201ENST00000431120 PRR11Q96HE9 360 aaPredicted RBP13.67□□□□□ -0.22
GCSHP3-201ENST00000431120 NAF1Q96HR8 494 aaKnown RBP13.67□□□□□ -0.22
GCSHP3-201ENST00000431120 MCEEQ96PE7 176 aa13.67□□□□□ -0.22
GCSHP3-201ENST00000431120 CCDC3Q9BQI4 270 aa13.67□□□□□ -0.22
GCSHP3-201ENST00000431120 CLPBQ9H078 707 aa13.67□□□□□ -0.22
GCSHP3-201ENST00000431120 KLC2Q9H0B6 622 aa13.67□□□□□ -0.22
GCSHP3-201ENST00000431120 LRRC19Q9H756 370 aa13.67□□□□□ -0.22
GCSHP3-201ENST00000431120 PDFQ9HBH1 243 aa13.67□□□□□ -0.22
GCSHP3-201ENST00000431120 ANO10Q9NW15 660 aa13.67□□□□□ -0.22
GCSHP3-201ENST00000431120 PNMA8BQ9ULN7 279 aaPredicted RBP13.67□□□□□ -0.22
GCSHP3-201ENST00000431120 DGKBQ9Y6T7 804 aa13.67□□□□□ -0.22
GCSHP3-201ENST00000431120 A0A1W2PNU3 283 aaPredicted RBP13.66□□□□□ -0.22
GCSHP3-201ENST00000431120 ARHGAP42A6NI28 874 aa13.66□□□□□ -0.22
GCSHP3-201ENST00000431120 PRAMEF11O60813 436 aa13.66□□□□□ -0.22
GCSHP3-201ENST00000431120 ITGA2BP08514 1039 aa13.66□□□□□ -0.22
GCSHP3-201ENST00000431120 C6P13671 934 aa13.66□□□□□ -0.22
GCSHP3-201ENST00000431120 FERP16591 822 aa13.66□□□□□ -0.22
GCSHP3-201ENST00000431120 KELP23276 732 aa13.66□□□□□ -0.22
GCSHP3-201ENST00000431120 TPI1P60174 286 aa13.66□□□□□ -0.22
GCSHP3-201ENST00000431120 RPL7AP62424 266 aaKnown RBP13.66□□□□□ -0.22
GCSHP3-201ENST00000431120 MYL5Q02045 173 aa13.66□□□□□ -0.22
GCSHP3-201ENST00000431120 NSUN2Q08J23 767 aaKnown RBP eCLIP13.66□□□□□ -0.22
GCSHP3-201ENST00000431120 RFTN1Q14699 578 aaPredicted RBP13.66□□□□□ -0.22
GCSHP3-201ENST00000431120 ACAD10Q6JQN1 1059 aa13.66□□□□□ -0.22
GCSHP3-201ENST00000431120 PCSK4Q6UW60 755 aa13.66□□□□□ -0.22
GCSHP3-201ENST00000431120 ZNF605Q86T29 641 aa13.66□□□□□ -0.22
GCSHP3-201ENST00000431120 MCOLN2Q8IZK6 566 aa13.66□□□□□ -0.22
GCSHP3-201ENST00000431120 WRAP53Q9BUR4 548 aaKnown RBP13.66□□□□□ -0.22
GCSHP3-201ENST00000431120 APOOQ9BUR5 198 aa13.66□□□□□ -0.22
GCSHP3-201ENST00000431120 ATP13A3Q9H7F0 1226 aa13.66□□□□□ -0.22
GCSHP3-201ENST00000431120 PCDH12Q9NPG4 1184 aa13.66□□□□□ -0.22
GCSHP3-201ENST00000431120 SEPT11Q9NVA2 429 aaKnown RBP13.66□□□□□ -0.22
GCSHP3-201ENST00000431120 MYO6Q9UM54 1294 aa13.66□□□□□ -0.22
GCSHP3-201ENST00000431120 ATP8A1Q9Y2Q0 1164 aa13.66□□□□□ -0.22
GCSHP3-201ENST00000431120 INSIG1O15503 277 aa13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 PIGNO95427 931 aa13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 HOXC4P09017 264 aaPredicted RBP13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 SERPINA4P29622 427 aa13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 MMP12P39900 470 aa13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 SRP54P61011 504 aaKnown RBP13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 POLR2LP62875 67 aaKnown RBP13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 UBXN1Q04323 297 aa13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 INPP5AQ14642 412 aa13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 ALG11Q2TAA5 492 aa13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 LRRC73Q5JTD7 316 aa13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 ARHGAP40Q5TG30 622 aa13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 ENPP7Q6UWV6 458 aa13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 HID1Q8IV36 788 aa13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 PSTKQ8IV42 348 aaKnown RBP13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 PCDH19Q8TAB3 1148 aa13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 SPOCK2Q92563 424 aa13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 ECHDC3Q96DC8 303 aa13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 WDR92Q96MX6 357 aa13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 RBM15Q96T37 977 aaKnown RBP eCLIP13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 STRADBQ9C0K7 418 aa13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 CPNE5Q9HCH3 593 aa13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 LMBRD1Q9NUN5 540 aa13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 PARVAQ9NVD7 372 aa13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 KCTD5Q9NXV2 234 aa13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 KLQ9UEF7 1012 aa13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 PCDHGA7Q9Y5G6 932 aa13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 COL27A1Q8IZC6 1860 aaPredicted RBP13.65□□□□□ -0.22
GCSHP3-201ENST00000431120 A0A1W2PQ67 120 aa13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 K7ENP7 123 aa13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 PDE2AO00408 941 aaPredicted RBP13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 TNFRSF10CO14798 259 aa13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 TNFSF15O95150 251 aa13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 TNFP01375 233 aa13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 PNLIPP16233 465 aa13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 ITIH2P19823 946 aa13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 CDK11BP21127 795 aaKnown RBP13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 CCKBRP32239 447 aa13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 LIG3P49916 1009 aa13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 PDX1P52945 283 aa13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 KIAA1024LP59773 190 aa13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 TMCO4Q5TGY1 634 aa13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 INO80CQ6PI98 192 aaPredicted RBP13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 CRTC1Q6UUV9 634 aa13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 SASS6Q6UVJ0 657 aa13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 SRLQ86TD4 932 aa13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 FNIP1Q8TF40 1166 aa13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 TSACCQ96A04 125 aaPredicted RBP13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 TMEM159Q96B96 161 aa13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 EXOC2Q96KP1 924 aa13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 TMEM74Q96NL1 305 aa13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 GFM1Q96RP9 751 aaKnown RBP13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 GULP1Q9UBP9 304 aa13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 APPL1Q9UKG1 709 aa13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 ACSL6Q9UKU0 697 aa13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 GPR34Q9UPC5 381 aa13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 AP4E1Q9UPM8 1137 aa13.64□□□□□ -0.23
GCSHP3-201ENST00000431120 ATMQ13315 3056 aa13.63□□□□□ -0.23
GCSHP3-201ENST00000431120 D6RAR5 112 aa13.63□□□□□ -0.23
GCSHP3-201ENST00000431120 J3KR12 359 aa13.63□□□□□ -0.23
GCSHP3-201ENST00000431120 CACNB4O00305 520 aaPredicted RBP13.63□□□□□ -0.23
GCSHP3-201ENST00000431120 EEF2KO00418 725 aaKnown RBP13.63□□□□□ -0.23
GCSHP3-201ENST00000431120 PLD2O14939 933 aa13.63□□□□□ -0.23
GCSHP3-201ENST00000431120 BUB1BO60566 1050 aaPredicted RBP13.63□□□□□ -0.23
GCSHP3-201ENST00000431120 PALMO75781 387 aa13.63□□□□□ -0.23
GCSHP3-201ENST00000431120 PLA2G2AP14555 144 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms