RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 FAM131CQ96AQ9 280 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 RMDN1Q96DB5 314 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 TRIB3Q96RU7 358 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 ERP44Q9BS26 406 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 FAM126AQ9BYI3 521 aaPredicted RBP11.08□□□□□ -0.64
CHD4-202ENST00000430771 TPSD1Q9BZJ3 242 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 SLC6A17Q9H1V8 727 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 SGK2Q9HBY8 427 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 C11orf16Q9NQ32 467 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 POLR3BQ9NW08 1133 aaPredicted RBP11.08□□□□□ -0.64
CHD4-202ENST00000430771 USP36Q9P275 1121 aaKnown RBP11.08□□□□□ -0.64
CHD4-202ENST00000430771 TPX2Q9ULW0 747 aaKnown RBP11.08□□□□□ -0.64
CHD4-202ENST00000430771 SHOC2Q9UQ13 582 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 CHKBQ9Y259 395 aa11.08□□□□□ -0.64
CHD4-202ENST00000430771 A0A0J9YYE9 177 aa11.07□□□□□ -0.64
CHD4-202ENST00000430771 LOC285095A0A1B0GVY8 99 aa11.07□□□□□ -0.64
CHD4-202ENST00000430771 PLRG1O43660 514 aaKnown RBP11.07□□□□□ -0.64
CHD4-202ENST00000430771 SUN1O94901 812 aa11.07□□□□□ -0.64
CHD4-202ENST00000430771 SEC31AO94979 1220 aaKnown RBP11.07□□□□□ -0.64
CHD4-202ENST00000430771 IGLV3-19P01714 112 aa11.07□□□□□ -0.64
CHD4-202ENST00000430771 TRBC1P01850 177 aa11.07□□□□□ -0.64
CHD4-202ENST00000430771 ADRA1AP35348 466 aa11.07□□□□□ -0.64
CHD4-202ENST00000430771 P2RY2P41231 377 aa11.07□□□□□ -0.64
CHD4-202ENST00000430771 TPMTP51580 245 aa11.07□□□□□ -0.64
CHD4-202ENST00000430771 CDH17Q12864 832 aa11.07□□□□□ -0.64
CHD4-202ENST00000430771 MORF4L2Q15014 288 aa11.07□□□□□ -0.64
CHD4-202ENST00000430771 SLC1A5Q15758 541 aa11.07□□□□□ -0.64
CHD4-202ENST00000430771 UGP2Q16851 508 aa11.07□□□□□ -0.64
CHD4-202ENST00000430771 TEX35Q5T0J7 233 aa11.07□□□□□ -0.64
CHD4-202ENST00000430771 PIP5KL1Q5T9C9 394 aa11.07□□□□□ -0.64
CHD4-202ENST00000430771 C11orf74Q86VG3 221 aa11.07□□□□□ -0.64
CHD4-202ENST00000430771 WDR5BQ86VZ2 330 aa11.07□□□□□ -0.64
CHD4-202ENST00000430771 ZSWIM9Q86XI8 627 aa11.07□□□□□ -0.64
CHD4-202ENST00000430771 CPT1BQ92523 772 aa11.07□□□□□ -0.64
CHD4-202ENST00000430771 VOPP1Q96AW1 172 aa11.07□□□□□ -0.64
CHD4-202ENST00000430771 NSMCE3Q96MG7 304 aa11.07□□□□□ -0.64
CHD4-202ENST00000430771 FRMD8Q9BZ67 464 aaPredicted RBP11.07□□□□□ -0.64
CHD4-202ENST00000430771 TRIM31Q9BZY9 425 aa11.07□□□□□ -0.64
CHD4-202ENST00000430771 BTBD1Q9H0C5 482 aa11.07□□□□□ -0.64
CHD4-202ENST00000430771 HACD3Q9P035 362 aa11.07□□□□□ -0.64
CHD4-202ENST00000430771 CYP8B1Q9UNU6 501 aa11.07□□□□□ -0.64
CHD4-202ENST00000430771 LRRC72A6NJI9 287 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 ANKRD66B4E2M5 251 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 NEMP1O14524 444 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 AP1G1O43747 822 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 PDHA1P08559 390 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 ATXN1LP0C7T5 689 aaKnown RBP11.06□□□□□ -0.64
CHD4-202ENST00000430771 TDGF1P13385 188 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 ZNF30P17039 623 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 CD6P30203 668 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 VIPR1P32241 457 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 MMP12P39900 470 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 ABL2P42684 1182 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 METAP1P53582 386 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 TERF1P54274 439 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 ADPRHP54922 357 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 CSTF1Q05048 431 aaKnown RBP11.06□□□□□ -0.64
CHD4-202ENST00000430771 ARHGEF7Q14155 803 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 IHHQ14623 411 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 QPCTQ16769 361 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 ZNF528Q3MIS6 628 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 USP39Q53GS9 565 aaKnown RBP11.06□□□□□ -0.64
CHD4-202ENST00000430771 SIRPB2Q5JXA9 342 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 RNASEH2BQ5TBB1 312 aaKnown RBP11.06□□□□□ -0.64
CHD4-202ENST00000430771 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.06□□□□□ -0.64
CHD4-202ENST00000430771 DPPA4Q7L190 304 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 TTC7BQ86TV6 843 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 LONP2Q86WA8 852 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 SLC25A41Q8N5S1 370 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 DNAAF3Q8N9W5 541 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 PIH1D2Q8WWB5 315 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 MCCC1Q96RQ3 725 aaPredicted RBP11.06□□□□□ -0.64
CHD4-202ENST00000430771 LYSMD1Q96S90 227 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 LRRC1Q9BTT6 524 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 FAM129AQ9BZQ8 928 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 DPH5Q9H2P9 285 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 KDM4CQ9H3R0 1056 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 XAB2Q9HCS7 855 aaKnown RBP11.06□□□□□ -0.64
CHD4-202ENST00000430771 PREBQ9HCU5 417 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 PCDH12Q9NPG4 1184 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 ITM2CQ9NQX7 267 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 WHRNQ9P202 907 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 SERGEFQ9UGK8 458 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 ZDBF2Q9HCK1 2354 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 EML5Q05BV3 1969 aa11.06□□□□□ -0.64
CHD4-202ENST00000430771 MYLKQ15746 1914 aa11.05□□□□□ -0.64
CHD4-202ENST00000430771 H0Y858 1186 aa11.05□□□□□ -0.64
CHD4-202ENST00000430771 PSMD11O00231 422 aa11.05□□□□□ -0.64
CHD4-202ENST00000430771 PLK4O00444 970 aa11.05□□□□□ -0.64
CHD4-202ENST00000430771 RIOK3O14730 519 aaKnown RBP11.05□□□□□ -0.64
CHD4-202ENST00000430771 GALR2O43603 387 aaPredicted RBP11.05□□□□□ -0.64
CHD4-202ENST00000430771 TSPAN6O43657 245 aa11.05□□□□□ -0.64
CHD4-202ENST00000430771 USP12O75317 370 aa11.05□□□□□ -0.64
CHD4-202ENST00000430771 TMEM63AO94886 807 aa11.05□□□□□ -0.64
CHD4-202ENST00000430771 SEMA4FO95754 770 aa11.05□□□□□ -0.64
CHD4-202ENST00000430771 AGTP01019 485 aa11.05□□□□□ -0.64
CHD4-202ENST00000430771 PRLP01236 227 aa11.05□□□□□ -0.64
CHD4-202ENST00000430771 ELFN1P0C7U0 828 aa11.05□□□□□ -0.64
CHD4-202ENST00000430771 MLNP12872 115 aa11.05□□□□□ -0.64
CHD4-202ENST00000430771 TIMP2P16035 220 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms