RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 LIG3P49916 1009 aa17.71■□□□□ 0.43
NUP50-208ENST00000430547 MMRN1Q13201 1228 aa17.71■□□□□ 0.43
NUP50-208ENST00000430547 PDK2Q15119 407 aa17.71■□□□□ 0.43
NUP50-208ENST00000430547 IRF4Q15306 451 aa17.71■□□□□ 0.43
NUP50-208ENST00000430547 PROX2Q3B8N5 592 aa17.71■□□□□ 0.43
NUP50-208ENST00000430547 MARC1Q5VT66 337 aa17.71■□□□□ 0.43
NUP50-208ENST00000430547 TMPRSS12Q86WS5 348 aa17.71■□□□□ 0.43
NUP50-208ENST00000430547 ZSWIM9Q86XI8 627 aa17.71■□□□□ 0.43
NUP50-208ENST00000430547 LRRC49Q8IUZ0 686 aa17.71■□□□□ 0.43
NUP50-208ENST00000430547 TP53I13Q8NBR0 393 aaPredicted RBP17.71■□□□□ 0.43
NUP50-208ENST00000430547 ZNF548Q8NEK5 533 aaPredicted RBP17.71■□□□□ 0.43
NUP50-208ENST00000430547 PDCD6IPQ8WUM4 868 aaKnown RBP17.71■□□□□ 0.43
NUP50-208ENST00000430547 BTN2A2Q8WVV5 523 aa17.71■□□□□ 0.43
NUP50-208ENST00000430547 DUSP23Q9BVJ7 150 aa17.71■□□□□ 0.43
NUP50-208ENST00000430547 ASPMQ8IZT6 3477 aa17.7■□□□□ 0.42
NUP50-208ENST00000430547 A0A1W2PQ67 120 aa17.7■□□□□ 0.42
NUP50-208ENST00000430547 FAM149AA5PLN7 773 aa17.7■□□□□ 0.42
NUP50-208ENST00000430547 SCAMP1O15126 338 aa17.7■□□□□ 0.42
NUP50-208ENST00000430547 SOCS5O75159 536 aa17.7■□□□□ 0.42
NUP50-208ENST00000430547 KRT37O76014 449 aa17.7■□□□□ 0.42
NUP50-208ENST00000430547 CD48P09326 243 aa17.7■□□□□ 0.42
NUP50-208ENST00000430547 ELFN1P0C7U0 828 aa17.7■□□□□ 0.42
NUP50-208ENST00000430547 JUPP14923 745 aa17.7■□□□□ 0.42
NUP50-208ENST00000430547 ACP1P24666 158 aa17.7■□□□□ 0.42
NUP50-208ENST00000430547 MMP13P45452 471 aa17.7■□□□□ 0.42
NUP50-208ENST00000430547 SEMG2Q02383 582 aa17.7■□□□□ 0.42
NUP50-208ENST00000430547 DPYSL3Q14195 570 aa17.7■□□□□ 0.42
NUP50-208ENST00000430547 MESDQ14696 234 aa17.7■□□□□ 0.42
NUP50-208ENST00000430547 ASTE1Q2TB18 679 aaPredicted RBP17.7■□□□□ 0.42
NUP50-208ENST00000430547 KDM7AQ6ZMT4 941 aa17.7■□□□□ 0.42
NUP50-208ENST00000430547 MACC1Q6ZN28 852 aa17.7■□□□□ 0.42
NUP50-208ENST00000430547 FAM71BQ8TC56 605 aa17.7■□□□□ 0.42
NUP50-208ENST00000430547 ECHDC3Q96DC8 303 aa17.7■□□□□ 0.42
NUP50-208ENST00000430547 NUDCD1Q96RS6 583 aa17.7■□□□□ 0.42
NUP50-208ENST00000430547 ZNF670Q9BS34 389 aa17.7■□□□□ 0.42
NUP50-208ENST00000430547 SLC13A1Q9BZW2 595 aa17.7■□□□□ 0.42
NUP50-208ENST00000430547 TRIM5Q9C035 493 aa17.7■□□□□ 0.42
NUP50-208ENST00000430547 CCDC86Q9H6F5 360 aaKnown RBP17.7■□□□□ 0.42
NUP50-208ENST00000430547 NHEJ1Q9H9Q4 299 aaPredicted RBP17.7■□□□□ 0.42
NUP50-208ENST00000430547 MBNL1Q9NR56 388 aaKnown RBP17.7■□□□□ 0.42
NUP50-208ENST00000430547 SPTLC3Q9NUV7 552 aa17.7■□□□□ 0.42
NUP50-208ENST00000430547 HAUS2Q9NVX0 235 aa17.7■□□□□ 0.42
NUP50-208ENST00000430547 APOBEC3BQ9UH17 382 aaKnown RBP17.7■□□□□ 0.42
NUP50-208ENST00000430547 AKR1B15C9JRZ8 316 aaPredicted RBP17.69■□□□□ 0.42
NUP50-208ENST00000430547 AQP9O43315 295 aa17.69■□□□□ 0.42
NUP50-208ENST00000430547 MFSD11O43934 449 aa17.69■□□□□ 0.42
NUP50-208ENST00000430547 NEBLO76041 1014 aa17.69■□□□□ 0.42
NUP50-208ENST00000430547 HTR1BP28222 390 aa17.69■□□□□ 0.42
NUP50-208ENST00000430547 MAN1A1P33908 653 aa17.69■□□□□ 0.42
NUP50-208ENST00000430547 ATP13A4Q4VNC1 1196 aa17.69■□□□□ 0.42
NUP50-208ENST00000430547 ANKRD20A8PQ5CZ79 823 aa17.69■□□□□ 0.42
NUP50-208ENST00000430547 TPRG1LQ5T0D9 272 aa17.69■□□□□ 0.42
NUP50-208ENST00000430547 FAXCQ5TGI0 409 aa17.69■□□□□ 0.42
NUP50-208ENST00000430547 TIGD7Q6NT04 549 aaPredicted RBP17.69■□□□□ 0.42
NUP50-208ENST00000430547 RHOT2Q8IXI1 618 aa17.69■□□□□ 0.42
NUP50-208ENST00000430547 LMX1AQ8TE12 382 aa17.69■□□□□ 0.42
NUP50-208ENST00000430547 CHP1Q99653 195 aa17.69■□□□□ 0.42
NUP50-208ENST00000430547 IL12RB2Q99665 862 aa17.69■□□□□ 0.42
NUP50-208ENST00000430547 MGME1Q9BQP7 344 aa17.69■□□□□ 0.42
NUP50-208ENST00000430547 SPASTQ9UBP0 616 aa17.69■□□□□ 0.42
NUP50-208ENST00000430547 CSNK1G3Q9Y6M4 447 aa17.69■□□□□ 0.42
NUP50-208ENST00000430547 LRP4O75096 1905 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 TTC24A2A3L6 582 aaPredicted RBP17.68■□□□□ 0.42
NUP50-208ENST00000430547 CFAP69A5D8W1 941 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 K7ESM1 405 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 TRAFD1O14545 582 aaPredicted RBP17.68■□□□□ 0.42
NUP50-208ENST00000430547 PEX11BO96011 259 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 CPP00450 1065 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 PCCBP05166 539 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 IL4RP24394 825 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 GARSP41250 739 aaKnown RBP17.68■□□□□ 0.42
NUP50-208ENST00000430547 PEX5P50542 639 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 BLKP51451 505 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 DUSP3P51452 185 aaPredicted RBP17.68■□□□□ 0.42
NUP50-208ENST00000430547 TAS2R40P59535 323 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 MAXP61244 160 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 PPARDQ03181 441 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 ITKQ08881 620 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 EIF2B5Q13144 721 aaKnown RBP17.68■□□□□ 0.42
NUP50-208ENST00000430547 WSCD2Q2TBF2 565 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 ODF2Q5BJF6 829 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 RALGPS1Q5JS13 557 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 HES3Q5TGS1 186 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 NCBP2-AS2Q69YL0 99 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 ZCCHC8Q6NZY4 707 aaKnown RBP17.68■□□□□ 0.42
NUP50-208ENST00000430547 DPPA4Q7L190 304 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 MARCH9Q86YJ5 346 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 CPNE8Q86YQ8 564 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 PHACTR4Q8IZ21 702 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 PDCD7Q8N8D1 485 aaKnown RBP17.68■□□□□ 0.42
NUP50-208ENST00000430547 ATL2Q8NHH9 583 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 PCDH19Q8TAB3 1148 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 SLC35G2Q8TBE7 412 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 APOLD1Q96LR9 279 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 CAAP1Q9H8G2 361 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 NT5MQ9NPB1 228 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 PCDHGC4Q9Y5F7 938 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 WDFY3Q8IZQ1 3526 aa17.68■□□□□ 0.42
NUP50-208ENST00000430547 KNTC1P50748 2209 aa17.67■□□□□ 0.42
NUP50-208ENST00000430547 CKMT1AP12532 417 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms