RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 RC3H2Q9HBD1 1191 aaKnown RBP16.54■□□□□ 0.24
RIF1-204ENST00000430328 TRHDEQ9UKU6 1024 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 ACTL7BQ9Y614 415 aa16.54■□□□□ 0.24
RIF1-204ENST00000430328 OR1E1P30953 314 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 EPHB3P54753 998 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 FAAH2Q6GMR7 532 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 TRMUO75648 421 aaKnown RBP16.53■□□□□ 0.24
RIF1-204ENST00000430328 PRKD3O94806 890 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 TRAPPC5Q8IUR0 188 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 ZFP14Q9HCL3 533 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 MRTO4Q9UKD2 239 aaKnown RBP16.53■□□□□ 0.24
RIF1-204ENST00000430328 ABLIM1O14639 778 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 HCN1O60741 890 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 SAGP10523 405 aaPredicted RBP16.53■□□□□ 0.24
RIF1-204ENST00000430328 HOXC12P31275 282 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 FMO4P31512 558 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 OR3A3P47888 321 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 OR3A2P47893 321 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 ZCCHC12Q6PEW1 402 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 TMC3Q7Z5M5 1100 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 TEX19Q8NA77 164 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 SNX33Q8WV41 574 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 MKL1Q969V6 931 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 MARK4Q96L34 752 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 SMURF2Q9HAU4 748 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 TP73O15350 636 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 RAMP2O60895 175 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 EZH1Q92800 747 aaPredicted RBP16.53■□□□□ 0.24
RIF1-204ENST00000430328 C16orf58Q96GQ5 468 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 DMRTB1Q96MA1 342 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 TBX20Q9UMR3 447 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 CCRL2O00421 344 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 DDX3YO15523 660 aaKnown RBP16.53■□□□□ 0.24
RIF1-204ENST00000430328 TUBG1P23258 451 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 AXLP30530 894 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 SPOCD1Q6ZMY3 1216 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 ACOT1Q86TX2 421 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 RBM4BQ9BQ04 359 aaKnown RBP16.53■□□□□ 0.24
RIF1-204ENST00000430328 RBM4Q9BWF3 364 aaKnown RBP16.53■□□□□ 0.24
RIF1-204ENST00000430328 NAMPTP43490 491 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 NUMBP49757 651 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 ZNF366Q8N895 744 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 POC1BQ8TC44 478 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 THRSPQ92748 146 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 NXNL1Q96CM4 212 aa16.53■□□□□ 0.24
RIF1-204ENST00000430328 TDRD3Q9H7E2 651 aaKnown RBP16.53■□□□□ 0.24
RIF1-204ENST00000430328 ANXA5P08758 320 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 PON1P27169 355 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 EHD4Q9H223 541 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 C17orf75Q9HAS0 396 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 MOCS1Q9NZB8 636 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 CPT1AP50416 773 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 USP45Q70EL2 814 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 TRIM74Q86UV6 250 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 TRIM73Q86UV7 250 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 TTLL6Q8N841 843 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 IL17REQ8NFR9 667 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 CIDECQ96AQ7 238 aaPredicted RBP16.52■□□□□ 0.24
RIF1-204ENST00000430328 SCGB3A2Q96PL1 93 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 PANX1Q96RD7 426 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 TBL1YQ9BQ87 522 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 HBP1O60381 514 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 LSM8O95777 96 aaKnown RBP16.52■□□□□ 0.24
RIF1-204ENST00000430328 STAG3L1P0CL83 205 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 MC1RQ01726 317 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 ITGA7Q13683 1181 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 ADGRF2Q8IZF7 708 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 SEMA4AQ9H3S1 761 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 RFXANKO14593 260 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 SNAPC5O75971 98 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 KAT7O95251 611 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 OR52K1Q8NGK4 314 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 TP53INP1Q96A56 240 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 LPIN3Q9BQK8 851 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 SEMA4BQ9NPR2 832 aaPredicted RBP16.52■□□□□ 0.24
RIF1-204ENST00000430328 TFR2Q9UP52 801 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 POFUT2Q9Y2G5 429 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 PEX16Q9Y5Y5 336 aa16.52■□□□□ 0.24
RIF1-204ENST00000430328 COX4I1P13073 169 aa16.52■□□□□ 0.23
RIF1-204ENST00000430328 ASMTP46597 345 aa16.52■□□□□ 0.23
RIF1-204ENST00000430328 SLC9A3P48764 834 aa16.52■□□□□ 0.23
RIF1-204ENST00000430328 LINGO2Q7L985 606 aa16.52■□□□□ 0.23
RIF1-204ENST00000430328 CEP295NLQ96MC4 621 aa16.52■□□□□ 0.23
RIF1-204ENST00000430328 TBC1D10AQ9BXI6 508 aa16.52■□□□□ 0.23
RIF1-204ENST00000430328 SLC39A8Q9C0K1 460 aa16.52■□□□□ 0.23
RIF1-204ENST00000430328 SASH3O75995 380 aa16.52■□□□□ 0.23
RIF1-204ENST00000430328 VAPBO95292 243 aa16.52■□□□□ 0.23
RIF1-204ENST00000430328 ITPKBP27987 946 aa16.52■□□□□ 0.23
RIF1-204ENST00000430328 HDAC2Q92769 488 aaKnown RBP16.52■□□□□ 0.23
RIF1-204ENST00000430328 THG1LQ9NWX6 298 aaKnown RBP16.52■□□□□ 0.23
RIF1-204ENST00000430328 RPTORQ8N122 1335 aa16.52■□□□□ 0.23
RIF1-204ENST00000430328 SLC12A8A0AV02 714 aa16.52■□□□□ 0.23
RIF1-204ENST00000430328 PPIBP23284 216 aaKnown RBP16.52■□□□□ 0.23
RIF1-204ENST00000430328 PCDH1Q08174 1060 aa16.52■□□□□ 0.23
RIF1-204ENST00000430328 ZNF697Q5TEC3 545 aa16.52■□□□□ 0.23
RIF1-204ENST00000430328 TMEM110Q86TL2 294 aa16.52■□□□□ 0.23
RIF1-204ENST00000430328 TOP1MTQ969P6 601 aa16.52■□□□□ 0.23
RIF1-204ENST00000430328 PAK6Q9NQU5 681 aaPredicted RBP16.52■□□□□ 0.23
RIF1-204ENST00000430328 AXIN2Q9Y2T1 843 aa16.52■□□□□ 0.23
RIF1-204ENST00000430328 ERVV-1B6SEH8 477 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms