RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 RANBP9Q96S59 729 aa14.04□□□□□ -0.16
RBM39-212ENST00000429968 TTPALQ9BTX7 342 aa14.04□□□□□ -0.16
RBM39-212ENST00000429968 CYP4F11Q9HBI6 524 aa14.04□□□□□ -0.16
RBM39-212ENST00000429968 CYP4F12Q9HCS2 524 aa14.04□□□□□ -0.16
RBM39-212ENST00000429968 OLA1Q9NTK5 396 aaKnown RBP14.04□□□□□ -0.16
RBM39-212ENST00000429968 LRFN2Q9ULH4 789 aa14.04□□□□□ -0.16
RBM39-212ENST00000429968 RAP2CQ9Y3L5 183 aa14.04□□□□□ -0.16
RBM39-212ENST00000429968 ZFP37Q9Y6Q3 630 aaPredicted RBP14.04□□□□□ -0.16
RBM39-212ENST00000429968 UPP2O95045 317 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 COL6A1P12109 1028 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 HNRNPLP14866 589 aaKnown RBP eCLIP14.03□□□□□ -0.16
RBM39-212ENST00000429968 PAMP19021 973 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 TFEBP19484 476 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 ITGAXP20702 1163 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 MAP2K2P36507 400 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 ABL2P42684 1182 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 LEPRP48357 1165 aaKnown RBP14.03□□□□□ -0.16
RBM39-212ENST00000429968 PLK1P53350 603 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 RING1Q06587 406 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 TNK2Q07912 1038 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 KLF10Q13118 480 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 PTPRRQ15256 657 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 TECRLQ5HYJ1 363 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.03□□□□□ -0.166e-6■■■□□ 15.3
RBM39-212ENST00000429968 CCNYL1Q8N7R7 359 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 RDH11Q8TC12 318 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 DNAJC1Q96KC8 554 aaKnown RBP14.03□□□□□ -0.16
RBM39-212ENST00000429968 FAM167BQ9BTA0 163 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 PRKD2Q9BZL6 878 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 ILKAPQ9H0C8 392 aaPredicted RBP14.03□□□□□ -0.16
RBM39-212ENST00000429968 C1orf21Q9H246 121 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 TCF7L2Q9NQB0 619 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 GKN1Q9NS71 199 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 PACSIN3Q9UKS6 424 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 SORCS3Q9UPU3 1222 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 CRYL1Q9Y2S2 319 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 WISP3O95389 354 aaPredicted RBP14.03□□□□□ -0.16
RBM39-212ENST00000429968 EFEMP2O95967 443 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 S1PR4O95977 384 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 TCF3P15923 654 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 OR1D2P34982 312 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 SERPINB5P36952 375 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 RPL14P50914 215 aaKnown RBP14.03□□□□□ -0.16
RBM39-212ENST00000429968 COPAP53621 1224 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 PDCD2Q16342 344 aaPredicted RBP14.03□□□□□ -0.16
RBM39-212ENST00000429968 PARP15Q460N3 678 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 C4orf46Q504U0 113 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 CFAP157Q5JU67 520 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 ZNF549Q6P9A3 640 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 KDM1BQ8NB78 822 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 OR6P1Q8NGX9 317 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 BLOC1S5Q8TDH9 187 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 UNC93B1Q9H1C4 597 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 POMKQ9H5K3 350 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 NMRK1Q9NWW6 199 aa14.03□□□□□ -0.16
RBM39-212ENST00000429968 FBXO9Q9UK97 447 aaPredicted RBP14.03□□□□□ -0.16
RBM39-212ENST00000429968 A0A0U1RQS6 177 aa14.02□□□□□ -0.16
RBM39-212ENST00000429968 COCHO43405 550 aa14.02□□□□□ -0.16
RBM39-212ENST00000429968 APOA4P06727 396 aa14.02□□□□□ -0.16
RBM39-212ENST00000429968 CCDC166P0CW27 439 aa14.02□□□□□ -0.16
RBM39-212ENST00000429968 COL6A2P12110 1019 aa14.02□□□□□ -0.16
RBM39-212ENST00000429968 BMP1P13497 986 aa14.02□□□□□ -0.16
RBM39-212ENST00000429968 CRABP2P29373 138 aa14.02□□□□□ -0.16
RBM39-212ENST00000429968 ELF1P32519 619 aa14.02□□□□□ -0.16
RBM39-212ENST00000429968 ATN1P54259 1190 aaPredicted RBP14.02□□□□□ -0.16
RBM39-212ENST00000429968 POU4F1Q01851 419 aa14.02□□□□□ -0.16
RBM39-212ENST00000429968 TAF11Q15544 211 aa14.02□□□□□ -0.16
RBM39-212ENST00000429968 HECTD2Q5U5R9 776 aa14.02□□□□□ -0.16
RBM39-212ENST00000429968 DEFB128Q7Z7B8 93 aa14.02□□□□□ -0.16
RBM39-212ENST00000429968 DENND1CQ8IV53 801 aa14.02□□□□□ -0.16
RBM39-212ENST00000429968 KBTBD2Q8IY47 623 aa14.02□□□□□ -0.16
RBM39-212ENST00000429968 FAM136AQ96C01 138 aa14.02□□□□□ -0.16
RBM39-212ENST00000429968 PPP1R2P1Q96PQ5 205 aa14.02□□□□□ -0.16
RBM39-212ENST00000429968 LENG8Q96PV6 779 aaPredicted RBP14.02□□□□□ -0.16
RBM39-212ENST00000429968 TTLL2Q9BWV7 592 aa14.02□□□□□ -0.16
RBM39-212ENST00000429968 PPP1R12CQ9BZL4 782 aa14.02□□□□□ -0.16
RBM39-212ENST00000429968 MRPL46Q9H2W6 279 aaKnown RBP14.02□□□□□ -0.16
RBM39-212ENST00000429968 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.02□□□□□ -0.16
RBM39-212ENST00000429968 LRRC42Q9Y546 428 aa14.02□□□□□ -0.16
RBM39-212ENST00000429968 SPO11Q9Y5K1 396 aa14.02□□□□□ -0.16
RBM39-212ENST00000429968 HDAC3O15379 428 aa14.02□□□□□ -0.17
RBM39-212ENST00000429968 ACSL4O60488 711 aa14.02□□□□□ -0.17
RBM39-212ENST00000429968 COX4I1P13073 169 aa14.02□□□□□ -0.17
RBM39-212ENST00000429968 HMGA1P17096 107 aaKnown RBP14.02□□□□□ -0.17
RBM39-212ENST00000429968 DNAL1Q4LDG9 190 aa14.02□□□□□ -0.17
RBM39-212ENST00000429968 RNF111Q6ZNA4 994 aa14.02□□□□□ -0.17
RBM39-212ENST00000429968 TRIM67Q6ZTA4 783 aa14.02□□□□□ -0.17
RBM39-212ENST00000429968 NET1Q7Z628 596 aaPredicted RBP14.02□□□□□ -0.17
RBM39-212ENST00000429968 ZNF296Q8WUU4 475 aaPredicted RBP14.02□□□□□ -0.17
RBM39-212ENST00000429968 SEPT8Q92599 483 aa14.02□□□□□ -0.17
RBM39-212ENST00000429968 VWCEQ96DN2 955 aa14.02□□□□□ -0.17
RBM39-212ENST00000429968 TSNARE1Q96NA8 513 aa14.02□□□□□ -0.17
RBM39-212ENST00000429968 TRIB3Q96RU7 358 aa14.02□□□□□ -0.17
RBM39-212ENST00000429968 ZBED2Q9BTP6 218 aa14.02□□□□□ -0.17
RBM39-212ENST00000429968 CFHR5Q9BXR6 569 aa14.02□□□□□ -0.17
RBM39-212ENST00000429968 RNF38Q9H0F5 515 aa14.02□□□□□ -0.17
RBM39-212ENST00000429968 ZNF385DQ9H6B1 395 aa14.02□□□□□ -0.17
RBM39-212ENST00000429968 PPM1HQ9ULR3 514 aa14.02□□□□□ -0.17
RBM39-212ENST00000429968 CCDC162PA2VCL2 907 aa14.01□□□□□ -0.17
RBM39-212ENST00000429968 ZNF840PA6NDX5 716 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms