RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 RAB27AP51159 221 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 ATP4BP51164 291 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 IRF9Q00978 393 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 NSUN2Q08J23 767 aaKnown RBP eCLIP8.77□□□□□ -1.01
GABPB1-205ENST00000429662 LSAMPQ13449 338 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 SQLEQ14534 574 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 CNGA3Q16281 694 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 PDCD2Q16342 344 aaPredicted RBP8.77□□□□□ -1.01
GABPB1-205ENST00000429662 TCHHL1Q5QJ38 904 aaPredicted RBP8.77□□□□□ -1.01
GABPB1-205ENST00000429662 AGAP9Q5VTM2 703 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 WSCD1Q658N2 575 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 KIAA0930Q6ICG6 404 aaPredicted RBP8.77□□□□□ -1.01
GABPB1-205ENST00000429662 KLC3Q6P597 504 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 HACD2Q6Y1H2 254 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 ATG14Q6ZNE5 492 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 SLC22A9Q8IVM8 553 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 TMEM151AQ8N4L1 468 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 MAPK15Q8TD08 544 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 NAT14Q8WUY8 206 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 HLA-CQ95604 372 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 DUS3LQ96G46 650 aaKnown RBP8.77□□□□□ -1.01
GABPB1-205ENST00000429662 SENP8Q96LD8 212 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 PPP1R10Q96QC0 940 aaKnown RBP8.77□□□□□ -1.01
GABPB1-205ENST00000429662 CDRT15Q96T59 188 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 IL12RB2Q99665 862 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 TRMOQ9BU70 441 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 CEP41Q9BYV8 373 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 CXCL16Q9H2A7 254 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 WDR41Q9HAD4 459 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 GLOD4Q9HC38 313 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 CSNK1G1Q9HCP0 422 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 MAN1C1Q9NR34 630 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 CHST12Q9NRB3 414 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 CHRAC1Q9NRG0 131 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 TBC1D13Q9NVG8 400 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 PIH1D1Q9NWS0 290 aaKnown RBP8.77□□□□□ -1.01
GABPB1-205ENST00000429662 CLIC5Q9NZA1 410 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 COX16Q9P0S2 106 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 SUCOQ9UBS9 1254 aaKnown RBP8.77□□□□□ -1.01
GABPB1-205ENST00000429662 OR12D3Q9UGF7 316 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 MSRAQ9UJ68 235 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 SARDHQ9UL12 918 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 Q9Y3F1 56 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 PTPRZ1P23471 2315 aaPredicted RBP8.77□□□□□ -1.01
GABPB1-205ENST00000429662 EVPLQ92817 2033 aa8.77□□□□□ -1.01
GABPB1-205ENST00000429662 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.76□□□□□ -1.01
GABPB1-205ENST00000429662 PRSS51A0A1B0GVH4 220 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.76□□□□□ -1.01
GABPB1-205ENST00000429662 FAM95CA0A1B0GW59 222 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 ARHGAP10A1A4S6 786 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 EME2A4GXA9 379 aaPredicted RBP8.76□□□□□ -1.01
GABPB1-205ENST00000429662 YJEFN3A6XGL0 299 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 FAM72CH0Y354 149 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 HAS3O00219 553 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 CLDN5O00501 218 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 TXNDC9O14530 226 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 NRP1O14786 923 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 MATN3O15232 486 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 HCRTO43612 131 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 DLX3O60479 287 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 BEST1O76090 585 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 LRIG2O94898 1065 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 AHSGP02765 367 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 CA3P07451 260 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 SLC35E2BP0CK96 405 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 IL9P15248 144 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 HOXB8P17481 243 aaPredicted RBP8.76□□□□□ -1.01
GABPB1-205ENST00000429662 HOXC13P31276 330 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 MLLT3P42568 568 aaPredicted RBP8.76□□□□□ -1.01
GABPB1-205ENST00000429662 CLCN5P51795 746 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 NAGLUP54802 743 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 PITX1P78337 314 aaPredicted RBP8.76□□□□□ -1.01
GABPB1-205ENST00000429662 ADAM17P78536 824 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 FOXK2Q01167 660 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 NRG1Q02297 640 aaPredicted RBP8.76□□□□□ -1.01
GABPB1-205ENST00000429662 CREB5Q02930 508 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 SOX4Q06945 474 aaPredicted RBP8.76□□□□□ -1.01
GABPB1-205ENST00000429662 TCF15Q12870 199 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 DLG1Q12959 904 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 ZBTB17Q13105 803 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 LAMB3Q13751 1172 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 MAPRE1Q15691 268 aaKnown RBP8.76□□□□□ -1.01
GABPB1-205ENST00000429662 FAM83EQ2M2I3 478 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 USP41Q3LFD5 358 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 SPATS1Q496A3 300 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 ZNF618Q5T7W0 954 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 FAM72AQ5TYM5 149 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 NXNQ6DKJ4 435 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 FAM72DQ6L9T8 149 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 BORAQ6PGQ7 559 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 CHSY3Q70JA7 882 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 FAM72BQ86X60 149 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 METTL23Q86XA0 190 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 TICAM1Q8IUC6 712 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 GJD3Q8N144 294 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 FSTL5Q8N475 847 aaPredicted RBP8.76□□□□□ -1.01
GABPB1-205ENST00000429662 ATPAF2Q8N5M1 289 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 NPWQ8N729 165 aa8.76□□□□□ -1.01
GABPB1-205ENST00000429662 C2CD4AQ8NCU7 369 aaPredicted RBP8.76□□□□□ -1.01
GABPB1-205ENST00000429662 SMG8Q8ND04 991 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms