RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 ZNF670Q9BS34 389 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 SCNM1Q9BWG6 230 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 C1QTNF7Q9BXJ2 289 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 C1QTNF2Q9BXJ5 285 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 SUV39H2Q9H5I1 410 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 CAAP1Q9H8G2 361 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 LCMT1Q9UIC8 334 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 KLK13Q9UKR3 277 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 WASF3Q9UPY6 502 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 APOBEC2Q9Y235 224 aaKnown RBP9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 ATP8A1Q9Y2Q0 1164 aa9.3□□□□□ -0.92
RFX3-AS1-202ENST00000427722 FPGTO14772 594 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 FFAR2O15552 330 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 TNFSF14O43557 240 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 MAFKO60675 156 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 TM7SF2O76062 418 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 TRIM16O95361 564 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 PEX11BO96011 259 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 KRT1P04264 644 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 CCNYL3P0C7X3 344 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 C6P13671 934 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 TNNT1P13805 278 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 IGFALSP35858 605 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 HSPA9P38646 679 aaKnown RBP9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 MMP13P45452 471 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 RABIFP47224 123 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 RXRGP48443 463 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 CSNK1DP48730 415 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 RENBPP51606 427 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 SUOXP51687 545 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 ZNF75DP51815 510 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 GBE1Q04446 702 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 BCL2L1Q07817 233 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 ELP6Q0PNE2 266 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 BNIP3Q12983 259 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 PDE1CQ14123 709 aaPredicted RBP9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 PDK2Q15119 407 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 IRF4Q15306 451 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 UGP2Q16851 508 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 ANKRD20A8PQ5CZ79 823 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 ZNF542PQ5EBM4 170 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 DESI1Q6ICB0 168 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 RAB44Q7Z6P3 723 aaPredicted RBP9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 SLCO6A1Q86UG4 719 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 PARGQ86W56 976 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 MAP7D3Q8IWC1 876 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 RHOT2Q8IXI1 618 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 BBS5Q8N3I7 341 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 PGBD5Q8N414 524 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 PCDH19Q8TAB3 1148 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 FAM71BQ8TC56 605 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 ADAMTS14Q8WXS8 1223 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 RAPGEF5Q92565 580 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 CNDP2Q96KP4 475 aaKnown RBP9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 BMFQ96LC9 184 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 MGME1Q9BQP7 344 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 ANP32EQ9BTT0 268 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 EVA1BQ9NVM1 165 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 DNAJC28Q9NX36 388 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 COQ6Q9Y2Z9 468 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 HYOU1Q9Y4L1 999 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 TTLL3Q9Y4R7 772 aa9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 NYNRINQ9P2P1 1898 aaKnown RBP9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 TPRP12270 2363 aaKnown RBP9.29□□□□□ -0.92
RFX3-AS1-202ENST00000427722 ACACBO00763 2458 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 C1QTNF9BB2RNN3 333 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 ENC1O14682 589 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 SPOPO43791 374 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 LZTS3O60299 673 aaPredicted RBP9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 MTA2O94776 668 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 AVPP01185 164 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 C1QTNF9P0C862 333 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 MMP12P39900 470 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 GARSP41250 739 aaKnown RBP9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 LIG3P49916 1009 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 GALNT2Q10471 571 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 RALGDSQ12967 914 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 DNAJC3Q13217 504 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 FZD2Q14332 565 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 PAFAH1B3Q15102 231 aaKnown RBP9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 TMEM52BQ4KMG9 183 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 TPRG1LQ5T0D9 272 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 MARC1Q5VT66 337 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 UNQ6494/PRO21346Q6UXR6 183 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 KANSL1Q7Z3B3 1105 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 GAS2L3Q86XJ1 694 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 PQLC3Q8N755 202 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 FAM174AQ8TBP5 190 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 HCAR2Q8TDS4 363 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 PDCD6IPQ8WUM4 868 aaKnown RBP9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 LRRN4Q8WUT4 740 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 ASB12Q8WXK4 309 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 FAF2Q96CS3 445 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 ECHDC3Q96DC8 303 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 MRFAP1L1Q96HT8 127 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 NSMCE3Q96MG7 304 aa9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 LENG8Q96PV6 779 aaPredicted RBP9.28□□□□□ -0.92
RFX3-AS1-202ENST00000427722 NUDCD1Q96RS6 583 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms