RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 TCP11X1B4DZS4 312 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 DLGAP3O95886 979 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 S100A9P06702 114 aaKnown RBP5.76□□□□□ -1.49
HERC4-206ENST00000427635 IRF8Q02556 426 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 PRKG2Q13237 762 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 TRIM28Q13263 835 aaKnown RBP5.76□□□□□ -1.49
HERC4-206ENST00000427635 CASP8Q14790 479 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 RAB39AQ14964 217 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 ZNF57Q68EA5 555 aaPredicted RBP5.76□□□□□ -1.49
HERC4-206ENST00000427635 ERICH5Q6P6B1 374 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 PGM2L1Q6PCE3 622 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 TTC33Q6PID6 262 aaPredicted RBP5.76□□□□□ -1.49
HERC4-206ENST00000427635 LONP2Q86WA8 852 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 SLC7A5P1Q8MH63 180 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 SVOPQ8N4V2 548 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 PRICKLE1Q96MT3 831 aaPredicted RBP5.76□□□□□ -1.49
HERC4-206ENST00000427635 TMEM121Q9BTD3 319 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 C1QTNF1Q9BXJ1 281 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 TCF7L2Q9NQB0 619 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 SERINC1Q9NRX5 453 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 PHF11Q9UIL8 331 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 TSPAN16Q9UKR8 245 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 SLC27A5Q9Y2P5 690 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 GRIN2DO15399 1336 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 ADGRB3O60242 1522 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 IQCMA0A1B0GVH7 501 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 ATP9AO75110 1047 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 RECQL4O94761 1208 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 KCNH1O95259 989 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 SRGNP10124 158 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 PRLRP16471 622 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 HOXB8P17481 243 aaPredicted RBP5.76□□□□□ -1.49
HERC4-206ENST00000427635 SERPINB5P36952 375 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 RAD23BP54727 409 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 SNTA1Q13424 505 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 NAB2Q15742 525 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 SLC18A3Q16572 532 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 XKR6Q5GH73 641 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 POMZP3Q6PJE2 187 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 MOXD1Q6UVY6 613 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 CTU1Q7Z7A3 348 aaKnown RBP5.76□□□□□ -1.49
HERC4-206ENST00000427635 ZNF227Q86WZ6 799 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 FBXO15Q8NCQ5 510 aaPredicted RBP5.76□□□□□ -1.49
HERC4-206ENST00000427635 OR2AJ1Q8NGZ0 328 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 ATP6V1G3Q96LB4 118 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 AIF1LQ9BQI0 150 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 ADAM7Q9H2U9 754 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 C12orf49Q9H741 205 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 ETNK1Q9HBU6 452 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 AGPAT3Q9NRZ7 376 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 CISHQ9NSE2 258 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 NCKIPSDQ9NZQ3 722 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 C19orf25Q9UFG5 118 aaPredicted RBP5.76□□□□□ -1.49
HERC4-206ENST00000427635 TMEM5Q9Y2B1 443 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 STX16-NPEPL1H3BU86 382 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 STX16O14662 325 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 TMEM253P0C7T8 217 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 ANPEPP15144 967 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 MAPK3P27361 379 aaPredicted RBP5.76□□□□□ -1.49
HERC4-206ENST00000427635 DNASE1L1P49184 302 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 LIMK1P53667 647 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 MYL6P60660 151 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 MRPS25P82663 173 aaKnown RBP5.76□□□□□ -1.49
HERC4-206ENST00000427635 COTL1Q14019 142 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 FAM187BQ17R55 369 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 FAM153CQ494X1 144 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 PDPK2PQ6A1A2 396 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 EIF3MQ7L2H7 374 aaKnown RBP5.76□□□□□ -1.49
HERC4-206ENST00000427635 BEND5Q7L4P6 421 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 ZC3H7AQ8IWR0 971 aaKnown RBP5.76□□□□□ -1.49
HERC4-206ENST00000427635 TBC1D21Q8IYX1 336 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 ING5Q8WYH8 240 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 BORCS6Q96GS4 357 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 APOL4Q9BPW4 351 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 APOL2Q9BQE5 337 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 LRMDAQ9H2I8 198 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 EFCAB1Q9HAE3 211 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 TBC1D23Q9NUY8 699 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 SPEF1Q9Y4P9 236 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 CLTCQ00610 1675 aaKnown RBP5.76□□□□□ -1.49
HERC4-206ENST00000427635 PRR36Q9H6K5 1346 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 EFCAB10A6NFE3 127 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 ATMINO43313 823 aaPredicted RBP5.76□□□□□ -1.49
HERC4-206ENST00000427635 CDH16O75309 829 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 SH3BGRLO75368 114 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 IGKV5-2P06315 115 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 ZNF3P17036 446 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 TAS2R41P59536 307 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 BPIFB3P59826 476 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 NAA20P61599 178 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 CAP1Q01518 475 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 ZNF846Q147U1 533 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 BMT2Q1RMZ1 405 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 SAMD4BQ5PRF9 694 aaKnown RBP5.76□□□□□ -1.49
HERC4-206ENST00000427635 NUP54Q7Z3B4 507 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 SGMS1Q86VZ5 419 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 HID1Q8IV36 788 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 DRAXINQ8NBI3 349 aaPredicted RBP5.76□□□□□ -1.49
HERC4-206ENST00000427635 HMGB4Q8WW32 186 aa5.76□□□□□ -1.49
HERC4-206ENST00000427635 PMEPA1Q969W9 287 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms