RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 IRF9Q00978 393 aa26.74■■□□□ 1.87
SH3GL3-202ENST00000427482 TRAF2Q12933 501 aa26.74■■□□□ 1.87
SH3GL3-202ENST00000427482 CHI3L2Q15782 390 aa26.74■■□□□ 1.87
SH3GL3-202ENST00000427482 CCDC153Q494R4 210 aa26.74■■□□□ 1.87
SH3GL3-202ENST00000427482 ATG16L1Q676U5 607 aa26.74■■□□□ 1.87
SH3GL3-202ENST00000427482 SLC41A1Q8IVJ1 513 aa26.74■■□□□ 1.87
SH3GL3-202ENST00000427482 OTUD6BQ8N6M0 293 aa26.74■■□□□ 1.87
SH3GL3-202ENST00000427482 OR6P1Q8NGX9 317 aa26.74■■□□□ 1.87
SH3GL3-202ENST00000427482 STYXQ8WUJ0 223 aa26.74■■□□□ 1.87
SH3GL3-202ENST00000427482 DNAJC1Q96KC8 554 aaKnown RBP26.74■■□□□ 1.87
SH3GL3-202ENST00000427482 FBXO6Q9NRD1 293 aaPredicted RBP26.74■■□□□ 1.87
SH3GL3-202ENST00000427482 KLHL14Q9P2G3 628 aa26.74■■□□□ 1.87
SH3GL3-202ENST00000427482 HAUS5O94927 633 aa26.74■■□□□ 1.87
SH3GL3-202ENST00000427482 PDHA1P08559 390 aa26.74■■□□□ 1.87
SH3GL3-202ENST00000427482 CD70P32970 193 aa26.74■■□□□ 1.87
SH3GL3-202ENST00000427482 LEPRP48357 1165 aaKnown RBP26.74■■□□□ 1.87
SH3GL3-202ENST00000427482 PLK1P53350 603 aa26.74■■□□□ 1.87
SH3GL3-202ENST00000427482 ERVK-21P61565 698 aa26.74■■□□□ 1.87
SH3GL3-202ENST00000427482 PLEKHG6Q3KR16 790 aa26.74■■□□□ 1.87
SH3GL3-202ENST00000427482 PTAR1Q7Z6K3 402 aaPredicted RBP26.74■■□□□ 1.87
SH3GL3-202ENST00000427482 CILP2Q8IUL8 1156 aa26.74■■□□□ 1.87
SH3GL3-202ENST00000427482 LPCAT1Q8NF37 534 aa26.74■■□□□ 1.87
SH3GL3-202ENST00000427482 LMLNQ96KR4 655 aa26.74■■□□□ 1.87
SH3GL3-202ENST00000427482 ZNF358Q9NW07 568 aa26.74■■□□□ 1.87
SH3GL3-202ENST00000427482 DPP7Q9UHL4 492 aa26.74■■□□□ 1.87
SH3GL3-202ENST00000427482 BPTFQ12830 3046 aa26.73■■□□□ 1.87
SH3GL3-202ENST00000427482 NUP210Q8TEM1 1887 aaPredicted RBP26.73■■□□□ 1.87
SH3GL3-202ENST00000427482 ANKRD65E5RJM6 399 aa26.73■■□□□ 1.87
SH3GL3-202ENST00000427482 RPP40O75818 363 aaKnown RBP26.73■■□□□ 1.87
SH3GL3-202ENST00000427482 PRAMEF12O95522 483 aa26.73■■□□□ 1.87
SH3GL3-202ENST00000427482 CRTAMO95727 393 aa26.73■■□□□ 1.87
SH3GL3-202ENST00000427482 FASTKD1Q53R41 847 aaKnown RBP26.73■■□□□ 1.87
SH3GL3-202ENST00000427482 ZNF697Q5TEC3 545 aa26.73■■□□□ 1.87
SH3GL3-202ENST00000427482 TRPM8Q7Z2W7 1104 aa26.73■■□□□ 1.87
SH3GL3-202ENST00000427482 GRASPQ7Z6J2 395 aaPredicted RBP26.73■■□□□ 1.87
SH3GL3-202ENST00000427482 ZNF707Q96C28 371 aaPredicted RBP26.73■■□□□ 1.87
SH3GL3-202ENST00000427482 THOC1Q96FV9 657 aaKnown RBP26.73■■□□□ 1.87
SH3GL3-202ENST00000427482 TBATAQ96M53 351 aa26.73■■□□□ 1.87
SH3GL3-202ENST00000427482 ADGRE3Q9BY15 652 aa26.73■■□□□ 1.87
SH3GL3-202ENST00000427482 KDM4CQ9H3R0 1056 aa26.73■■□□□ 1.87
SH3GL3-202ENST00000427482 PRDM4Q9UKN5 801 aa26.73■■□□□ 1.87
SH3GL3-202ENST00000427482 HCFC2Q9Y5Z7 792 aa26.73■■□□□ 1.87
SH3GL3-202ENST00000427482 CHD7Q9P2D1 2997 aa26.73■■□□□ 1.87
SH3GL3-202ENST00000427482 CCDC195A0A1B0GUA6 201 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 K7ERQ8 282 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 AURKAO14965 403 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 ZNF140P52738 457 aaPredicted RBP26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 TMPRSS15P98073 1019 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 BST1Q10588 318 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 PCLAFQ15004 111 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 TAF1BQ53T94 588 aaPredicted RBP26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 ATXN7L2Q5T6C5 722 aaPredicted RBP26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 CES4AQ5XG92 561 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 CNSTQ6PJW8 725 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 RAPH1Q70E73 1250 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 OR13C4Q8NGS5 318 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 ZMYM5Q9UJ78 669 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 TLK1Q9UKI8 766 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 INTS6Q9UL03 887 aaKnown RBP26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 PHGDHO43175 533 aaKnown RBP26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 BUD23O43709 281 aaKnown RBP26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 SLC35E2BP0CK96 405 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 TROVE2P10155 538 aaKnown RBP eCLIP26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 SAT1P21673 171 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 ALDH3A1P30838 453 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 CORO7P57737 925 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 RAB10P61026 200 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 AP1S1P61966 158 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 USP4Q13107 963 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 SLC12A1Q13621 1099 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 PTPRCAPQ14761 206 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 TAF1AQ15573 450 aaPredicted RBP26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 ZNF77Q15935 545 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 C10orf82Q8WW14 230 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 ELMO2Q96JJ3 720 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 RMDN2Q96LZ7 410 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 C1QTNF1Q9BXJ1 281 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 ABCF3Q9NUQ8 709 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 ABCB8Q9NUT2 735 aa26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 MARCH4Q9P2E8 410 aaPredicted RBP26.72■■□□□ 1.87
SH3GL3-202ENST00000427482 OR51F1A6NGY5 319 aa26.71■■□□□ 1.87
SH3GL3-202ENST00000427482 SMAD6O43541 496 aaKnown RBP26.71■■□□□ 1.87
SH3GL3-202ENST00000427482 CLCN5P51795 746 aa26.71■■□□□ 1.87
SH3GL3-202ENST00000427482 ZNF789Q5FWF6 425 aa26.71■■□□□ 1.87
SH3GL3-202ENST00000427482 MBLAC2Q68D91 279 aa26.71■■□□□ 1.87
SH3GL3-202ENST00000427482 GLT6D1Q7Z4J2 308 aa26.71■■□□□ 1.87
SH3GL3-202ENST00000427482 LCA5Q86VQ0 697 aa26.71■■□□□ 1.87
SH3GL3-202ENST00000427482 TMEM25Q86YD3 366 aa26.71■■□□□ 1.87
SH3GL3-202ENST00000427482 SUDS3Q9H7L9 328 aaPredicted RBP26.71■■□□□ 1.87
SH3GL3-202ENST00000427482 NPHS2Q9NP85 383 aa26.71■■□□□ 1.87
SH3GL3-202ENST00000427482 NLE1Q9NVX2 485 aaPredicted RBP26.71■■□□□ 1.87
SH3GL3-202ENST00000427482 COPG2Q9UBF2 871 aa26.71■■□□□ 1.87
SH3GL3-202ENST00000427482 CXorf51AA0A1B0GTR3 108 aa26.7■■□□□ 1.87
SH3GL3-202ENST00000427482 CCDC162PA2VCL2 907 aa26.7■■□□□ 1.87
SH3GL3-202ENST00000427482 ANKRD66B4E2M5 251 aa26.7■■□□□ 1.87
SH3GL3-202ENST00000427482 TGDSO95455 350 aa26.7■■□□□ 1.87
SH3GL3-202ENST00000427482 GOT2P00505 430 aaKnown RBP26.7■■□□□ 1.87
SH3GL3-202ENST00000427482 PENKP01210 267 aaPredicted RBP26.7■■□□□ 1.87
SH3GL3-202ENST00000427482 TCF3P15923 654 aa26.7■■□□□ 1.87
SH3GL3-202ENST00000427482 STMN1P16949 149 aa26.7■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms