RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 XPO4Q9C0E2 1151 aaKnown RBP10.26□□□□□ -0.77
COMMD1-202ENST00000427417 DEF6Q9H4E7 631 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 PCDH12Q9NPG4 1184 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 ZNHIT6Q9NWK9 470 aaKnown RBP10.26□□□□□ -0.77
COMMD1-202ENST00000427417 UVRAGQ9P2Y5 699 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 SPASTQ9UBP0 616 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 CLCA2Q9UQC9 943 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 FAM208BQ5VWN6 2430 aa10.26□□□□□ -0.77
COMMD1-202ENST00000427417 MYLKQ15746 1914 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 ZZEF1O43149 2961 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 ZFYVE26Q68DK2 2539 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 K7ESM1 405 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 TPP1O14773 563 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 LZTS3O60299 673 aaPredicted RBP10.25□□□□□ -0.77
COMMD1-202ENST00000427417 BUB1BO60566 1050 aaPredicted RBP10.25□□□□□ -0.77
COMMD1-202ENST00000427417 H2AFZP0C0S5 128 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 GIMD1P0DJR0 217 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 MYF5P13349 255 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 C6P13671 934 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 ITIH2P19823 946 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 AMPD1P23109 780 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 HNRNPH3P31942 346 aaKnown RBP10.25□□□□□ -0.77
COMMD1-202ENST00000427417 EIF4A3P38919 411 aaKnown RBP10.25□□□□□ -0.77
COMMD1-202ENST00000427417 MMP12P39900 470 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 RGRP47804 291 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 LIG3P49916 1009 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 SCNN1BP51168 640 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 CDH6P55285 790 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 INSM1Q01101 510 aaPredicted RBP10.25□□□□□ -0.77
COMMD1-202ENST00000427417 SLC25A11Q02978 314 aaKnown RBP10.25□□□□□ -0.77
COMMD1-202ENST00000427417 PPARDQ03181 441 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 CYP4F3Q08477 520 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 TARDBPQ13148 414 aaKnown RBP eCLIP10.25□□□□□ -0.77
COMMD1-202ENST00000427417 AGERQ15109 404 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 SLC18A3Q16572 532 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 FAXCQ5TGI0 409 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 SPECC1LQ69YQ0 1117 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 ARHGAP36Q6ZRI8 547 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 H2AFVQ71UI9 128 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 ATPAF2Q8N5M1 289 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 OR8K1Q8NGG5 319 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 ZNF564Q8TBZ8 553 aaPredicted RBP10.25□□□□□ -0.77
COMMD1-202ENST00000427417 LMX1AQ8TE12 382 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 CTNNBL1Q8WYA6 563 aaPredicted RBP10.25□□□□□ -0.77
COMMD1-202ENST00000427417 BTBD6Q96KE9 485 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 APOLD1Q96LR9 279 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 IL12RB2Q99665 862 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 NRSN2Q9GZP1 204 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 ABCG4Q9H172 646 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 PCDH18Q9HCL0 1135 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 MBNL1Q9NR56 388 aaKnown RBP10.25□□□□□ -0.77
COMMD1-202ENST00000427417 HAUS2Q9NVX0 235 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 APOBEC3BQ9UH17 382 aaKnown RBP10.25□□□□□ -0.77
COMMD1-202ENST00000427417 SALL4Q9UJQ4 1053 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 LHX6Q9UPM6 363 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 RAXQ9Y2V3 346 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 CHD6Q8TD26 2715 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 DMXL2Q8TDJ6 3036 aa10.25□□□□□ -0.77
COMMD1-202ENST00000427417 CACNA1GO43497 2377 aa10.24□□□□□ -0.77
COMMD1-202ENST00000427417 LAMA5O15230 3695 aa10.24□□□□□ -0.77
COMMD1-202ENST00000427417 MAFKO60675 156 aa10.24□□□□□ -0.77
COMMD1-202ENST00000427417 SOCS5O75159 536 aa10.24□□□□□ -0.77
COMMD1-202ENST00000427417 NEBLO76041 1014 aa10.24□□□□□ -0.77
COMMD1-202ENST00000427417 ELFN1P0C7U0 828 aa10.24□□□□□ -0.77
COMMD1-202ENST00000427417 TCF4P15884 667 aa10.24□□□□□ -0.77
COMMD1-202ENST00000427417 RPIAP49247 311 aa10.24□□□□□ -0.77
COMMD1-202ENST00000427417 SLC10A7Q0GE19 358 aa10.24□□□□□ -0.77
COMMD1-202ENST00000427417 EIF2B5Q13144 721 aaKnown RBP10.24□□□□□ -0.77
COMMD1-202ENST00000427417 MTM1Q13496 603 aa10.24□□□□□ -0.77
COMMD1-202ENST00000427417 IRF4Q15306 451 aa10.24□□□□□ -0.77
COMMD1-202ENST00000427417 WSCD2Q2TBF2 565 aa10.24□□□□□ -0.77
COMMD1-202ENST00000427417 PRRT3Q5FWE3 981 aa10.24□□□□□ -0.77
COMMD1-202ENST00000427417 RALGPS1Q5JS13 557 aa10.24□□□□□ -0.77
COMMD1-202ENST00000427417 MARC1Q5VT66 337 aa10.24□□□□□ -0.77
COMMD1-202ENST00000427417 MAP7D3Q8IWC1 876 aa10.24□□□□□ -0.77
COMMD1-202ENST00000427417 PHACTR4Q8IZ21 702 aa10.24□□□□□ -0.77
COMMD1-202ENST00000427417 SDR16C5Q8N3Y7 309 aa10.24□□□□□ -0.77
COMMD1-202ENST00000427417 FSTL5Q8N475 847 aaPredicted RBP10.24□□□□□ -0.77
COMMD1-202ENST00000427417 SCG3Q8WXD2 468 aaKnown RBP10.24□□□□□ -0.77
COMMD1-202ENST00000427417 SPOCK2Q92563 424 aa10.24□□□□□ -0.77
COMMD1-202ENST00000427417 NUDCD1Q96RS6 583 aa10.24□□□□□ -0.77
COMMD1-202ENST00000427417 SCUBE2Q9NQ36 999 aa10.24□□□□□ -0.77
COMMD1-202ENST00000427417 KCTD5Q9NXV2 234 aa10.24□□□□□ -0.77
COMMD1-202ENST00000427417 CTTNBP2NLQ9P2B4 639 aa10.24□□□□□ -0.77
COMMD1-202ENST00000427417 KLF15Q9UIH9 416 aa10.24□□□□□ -0.77
COMMD1-202ENST00000427417 DOLKQ9UPQ8 538 aa10.24□□□□□ -0.77
COMMD1-202ENST00000427417 COQ6Q9Y2Z9 468 aa10.24□□□□□ -0.77
COMMD1-202ENST00000427417 ADAMTS20P59510 1910 aa10.24□□□□□ -0.77
COMMD1-202ENST00000427417 URB1O60287 2271 aaKnown RBP10.23□□□□□ -0.77
COMMD1-202ENST00000427417 SSU72P8A0A1W2PR75 194 aa10.23□□□□□ -0.77
COMMD1-202ENST00000427417 LMO7DNF2Z398 122 aa10.23□□□□□ -0.77
COMMD1-202ENST00000427417 TRAFD1O14545 582 aaPredicted RBP10.23□□□□□ -0.77
COMMD1-202ENST00000427417 MUSKO15146 869 aa10.23□□□□□ -0.77
COMMD1-202ENST00000427417 AKR1B10O60218 316 aa10.23□□□□□ -0.77
COMMD1-202ENST00000427417 PROSCO94903 275 aa10.23□□□□□ -0.77
COMMD1-202ENST00000427417 RASGRP1O95267 797 aa10.23□□□□□ -0.77
COMMD1-202ENST00000427417 MT-CO3P00414 261 aa10.23□□□□□ -0.77
COMMD1-202ENST00000427417 PCCBP05166 539 aa10.23□□□□□ -0.77
COMMD1-202ENST00000427417 ANXA6P08133 673 aa10.23□□□□□ -0.77
COMMD1-202ENST00000427417 KRT7P08729 469 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms