RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 EXOC2Q96KP1 924 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 CCDC114Q96M63 670 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 GDAP1L1Q96MZ0 367 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 NUDCD1Q96RS6 583 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 WDR24Q96S15 920 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 CINPQ9BW66 212 aaPredicted RBP7.5□□□□□ -1.21
LINC01049-201ENST00000426840 IRF2BPLQ9H1B7 796 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 C10orf88Q9H8K7 445 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 USP29Q9HBJ7 922 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 RBM22Q9NW64 420 aaKnown RBP eCLIP7.5□□□□□ -1.21
LINC01049-201ENST00000426840 FBXL12Q9NXK8 326 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 WSB2Q9NYS7 404 aaPredicted RBP7.5□□□□□ -1.21
LINC01049-201ENST00000426840 SERGEFQ9UGK8 458 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 AMACRQ9UHK6 382 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 SCML1Q9UN30 329 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 CYP8B1Q9UNU6 501 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 R3HDM2Q9Y2K5 976 aaKnown RBP7.5□□□□□ -1.21
LINC01049-201ENST00000426840 GON4LQ3T8J9 2241 aa7.5□□□□□ -1.21
LINC01049-201ENST00000426840 A0A1W2PP55 124 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 C1QTNF3-AMACRE9PGA6 284 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 H7C0C1 242 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 KPNA3O00505 521 aaPredicted RBP7.49□□□□□ -1.21
LINC01049-201ENST00000426840 FANCGO15287 622 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 CEP104O60308 925 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 RPP40O75818 363 aaKnown RBP7.49□□□□□ -1.21
LINC01049-201ENST00000426840 IGSF6O95976 241 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 RBP3P10745 1247 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 ACADMP11310 421 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 EPXP11678 715 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 BCKDHBP21953 392 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 RBL1P28749 1068 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 ACSL1P33121 698 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 HSPA9P38646 679 aaKnown RBP7.49□□□□□ -1.21
LINC01049-201ENST00000426840 MMP13P45452 471 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 ATP5OP48047 213 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 PSMD8P48556 350 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 IDH3AP50213 366 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 SCNN1BP51168 640 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 EIF3EP60228 445 aaKnown RBP7.49□□□□□ -1.21
LINC01049-201ENST00000426840 MAXP61244 160 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 GNG11P61952 73 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 RAD51Q06609 339 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 NIPAL4Q0D2K0 466 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 WASHC5Q12768 1159 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 ZBTB17Q13105 803 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 BYSLQ13895 437 aaKnown RBP7.49□□□□□ -1.21
LINC01049-201ENST00000426840 ZNF235Q14590 738 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 C11orf91Q3C1V1 193 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 TEX44Q53QW1 395 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 SLC45A4Q5BKX6 768 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 ZNF805Q5CZA5 627 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 SEL1L2Q5TEA6 688 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 PAPD7Q5XG87 772 aaKnown RBP7.49□□□□□ -1.21
LINC01049-201ENST00000426840 ALG1LQ6GMV1 187 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 GDPD4Q6W3E5 623 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.49□□□□□ -1.21
LINC01049-201ENST00000426840 CACUL1Q86Y37 369 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 CAMK1DQ8IU85 385 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 BBS5Q8N3I7 341 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 RASGEF1CQ8N431 466 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 RYBPQ8N488 228 aaPredicted RBP7.49□□□□□ -1.21
LINC01049-201ENST00000426840 SUMF1Q8NBK3 374 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 SLC35B2Q8TB61 432 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 ARRDC2Q8TBH0 407 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 GRIN3AQ8TCU5 1115 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 TFB1MQ8WVM0 346 aaKnown RBP7.49□□□□□ -1.21
LINC01049-201ENST00000426840 ATOH1Q92858 354 aaPredicted RBP7.49□□□□□ -1.21
LINC01049-201ENST00000426840 IFT43Q96FT9 208 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 TOE1Q96GM8 510 aaKnown RBP7.49□□□□□ -1.21
LINC01049-201ENST00000426840 ZC3H10Q96K80 434 aaKnown RBP7.49□□□□□ -1.21
LINC01049-201ENST00000426840 PBKQ96KB5 322 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 TEKT5Q96M29 485 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 KLHL32Q96NJ5 620 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 QKIQ96PU8 341 aaKnown RBP eCLIP7.49□□□□□ -1.21
LINC01049-201ENST00000426840 FAM118BQ9BPY3 351 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 MGME1Q9BQP7 344 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 HDAC8Q9BY41 377 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 DUSP15Q9H1R2 295 aaPredicted RBP7.49□□□□□ -1.21
LINC01049-201ENST00000426840 SUV39H2Q9H5I1 410 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 ZDHHC6Q9H6R6 413 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 NOD2Q9HC29 1040 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 NT5MQ9NPB1 228 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 FAM86C1Q9NVL1 165 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 NCKAP1Q9Y2A7 1128 aa7.49□□□□□ -1.21
LINC01049-201ENST00000426840 PLXND1Q9Y4D7 1925 aa7.48□□□□□ -1.21
LINC01049-201ENST00000426840 THADAQ6YHU6 1953 aa7.48□□□□□ -1.21
LINC01049-201ENST00000426840 TSPAN11A1L157 253 aa7.48□□□□□ -1.21
LINC01049-201ENST00000426840 BCLAF3A2AJT9 711 aaKnown RBP7.48□□□□□ -1.21
LINC01049-201ENST00000426840 C16orf96A6NNT2 1141 aa7.48□□□□□ -1.21
LINC01049-201ENST00000426840 TRAFD1O14545 582 aaPredicted RBP7.48□□□□□ -1.21
LINC01049-201ENST00000426840 SLC7A4O43246 635 aa7.48□□□□□ -1.21
LINC01049-201ENST00000426840 MTSS1O43312 755 aa7.48□□□□□ -1.21
LINC01049-201ENST00000426840 HTRA2O43464 458 aaPredicted RBP7.48□□□□□ -1.21
LINC01049-201ENST00000426840 RNASEH2AO75792 299 aaKnown RBP7.48□□□□□ -1.21
LINC01049-201ENST00000426840 PIGNO95427 931 aa7.48□□□□□ -1.21
LINC01049-201ENST00000426840 FGGP02679 453 aa7.48□□□□□ -1.21
LINC01049-201ENST00000426840 HLA-DQB2P05538 268 aa7.48□□□□□ -1.21
LINC01049-201ENST00000426840 UGT2B4P06133 528 aa7.48□□□□□ -1.21
LINC01049-201ENST00000426840 MMP2P08253 660 aa7.48□□□□□ -1.21
LINC01049-201ENST00000426840 PRLRP16471 622 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms