RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 KIAA1522Q9P206 1035 aaPredicted RBP26.66■■□□□ 1.86
LDB1-202ENST00000425280 RIMKLBQ9ULI2 386 aa26.66■■□□□ 1.86
LDB1-202ENST00000425280 CHD7Q9P2D1 2997 aa26.65■■□□□ 1.86
LDB1-202ENST00000425280 BPTFQ12830 3046 aa26.65■■□□□ 1.86
LDB1-202ENST00000425280 GBF1Q92538 1859 aa26.65■■□□□ 1.86
LDB1-202ENST00000425280 IL1BP01584 269 aa26.65■■□□□ 1.86
LDB1-202ENST00000425280 CD70P32970 193 aa26.65■■□□□ 1.86
LDB1-202ENST00000425280 OVGP1Q12889 678 aa26.65■■□□□ 1.86
LDB1-202ENST00000425280 TRAF2Q12933 501 aa26.65■■□□□ 1.86
LDB1-202ENST00000425280 DBN1Q16643 649 aa26.65■■□□□ 1.86
LDB1-202ENST00000425280 FASTKD1Q53R41 847 aaKnown RBP26.65■■□□□ 1.86
LDB1-202ENST00000425280 LEMD2Q8NC56 503 aa26.65■■□□□ 1.86
LDB1-202ENST00000425280 GABPB2Q8TAK5 448 aaPredicted RBP26.65■■□□□ 1.86
LDB1-202ENST00000425280 RAB3IL1Q8TBN0 382 aa26.65■■□□□ 1.86
LDB1-202ENST00000425280 RMDN2Q96LZ7 410 aa26.65■■□□□ 1.86
LDB1-202ENST00000425280 TBATAQ96M53 351 aa26.65■■□□□ 1.86
LDB1-202ENST00000425280 ABCF3Q9NUQ8 709 aa26.65■■□□□ 1.86
LDB1-202ENST00000425280 OR51F1A6NGY5 319 aa26.64■■□□□ 1.86
LDB1-202ENST00000425280 CYBBP04839 570 aa26.64■■□□□ 1.86
LDB1-202ENST00000425280 LEPRP48357 1165 aaKnown RBP26.64■■□□□ 1.86
LDB1-202ENST00000425280 PGGT1BP53609 377 aa26.64■■□□□ 1.86
LDB1-202ENST00000425280 CORO7P57737 925 aa26.64■■□□□ 1.86
LDB1-202ENST00000425280 TMPRSS15P98073 1019 aa26.64■■□□□ 1.86
LDB1-202ENST00000425280 BST1Q10588 318 aa26.64■■□□□ 1.86
LDB1-202ENST00000425280 ZNF789Q5FWF6 425 aa26.64■■□□□ 1.86
LDB1-202ENST00000425280 ATXN7L2Q5T6C5 722 aaPredicted RBP26.64■■□□□ 1.86
LDB1-202ENST00000425280 ATG16L1Q676U5 607 aa26.64■■□□□ 1.86
LDB1-202ENST00000425280 RETSATQ6NUM9 610 aa26.64■■□□□ 1.86
LDB1-202ENST00000425280 CNSTQ6PJW8 725 aa26.64■■□□□ 1.86
LDB1-202ENST00000425280 LPCAT1Q8NF37 534 aa26.64■■□□□ 1.86
LDB1-202ENST00000425280 OR13C4Q8NGS5 318 aa26.64■■□□□ 1.86
LDB1-202ENST00000425280 ACDQ96AP0 544 aa26.64■■□□□ 1.86
LDB1-202ENST00000425280 KDM4CQ9H3R0 1056 aa26.64■■□□□ 1.86
LDB1-202ENST00000425280 TDP1Q9NUW8 608 aa26.64■■□□□ 1.86
LDB1-202ENST00000425280 PHGDHO43175 533 aaKnown RBP26.64■■□□□ 1.85
LDB1-202ENST00000425280 ALDH3A1P30838 453 aa26.64■■□□□ 1.85
LDB1-202ENST00000425280 PCLAFQ15004 111 aa26.64■■□□□ 1.85
LDB1-202ENST00000425280 CCDC153Q494R4 210 aa26.64■■□□□ 1.85
LDB1-202ENST00000425280 RAPH1Q70E73 1250 aa26.64■■□□□ 1.85
LDB1-202ENST00000425280 GRASPQ7Z6J2 395 aaPredicted RBP26.64■■□□□ 1.85
LDB1-202ENST00000425280 CILP2Q8IUL8 1156 aa26.64■■□□□ 1.85
LDB1-202ENST00000425280 STYXQ8WUJ0 223 aa26.64■■□□□ 1.85
LDB1-202ENST00000425280 SUDS3Q9H7L9 328 aaPredicted RBP26.64■■□□□ 1.85
LDB1-202ENST00000425280 NPHS2Q9NP85 383 aa26.64■■□□□ 1.85
LDB1-202ENST00000425280 MARCH4Q9P2E8 410 aaPredicted RBP26.64■■□□□ 1.85
LDB1-202ENST00000425280 TLK1Q9UKI8 766 aa26.64■■□□□ 1.85
LDB1-202ENST00000425280 ANKRD6Q9Y2G4 727 aa26.64■■□□□ 1.85
LDB1-202ENST00000425280 RPP40O75818 363 aaKnown RBP26.63■■□□□ 1.85
LDB1-202ENST00000425280 PRAMEF12O95522 483 aa26.63■■□□□ 1.85
LDB1-202ENST00000425280 GPM6BQ13491 265 aa26.63■■□□□ 1.85
LDB1-202ENST00000425280 SPRED3Q2MJR0 410 aa26.63■■□□□ 1.85
LDB1-202ENST00000425280 PLEKHG6Q3KR16 790 aa26.63■■□□□ 1.85
LDB1-202ENST00000425280 PDE12Q6L8Q7 609 aaKnown RBP26.63■■□□□ 1.85
LDB1-202ENST00000425280 GALNT7Q86SF2 657 aa26.63■■□□□ 1.85
LDB1-202ENST00000425280 C10orf82Q8WW14 230 aa26.63■■□□□ 1.85
LDB1-202ENST00000425280 ELMO2Q96JJ3 720 aa26.63■■□□□ 1.85
LDB1-202ENST00000425280 LMLNQ96KR4 655 aa26.63■■□□□ 1.85
LDB1-202ENST00000425280 SMIM14Q96QK8 99 aa26.63■■□□□ 1.85
LDB1-202ENST00000425280 INTS6Q9UL03 887 aaKnown RBP26.63■■□□□ 1.85
LDB1-202ENST00000425280 SOBPA7XYQ1 873 aa26.62■■□□□ 1.85
LDB1-202ENST00000425280 SMAD6O43541 496 aaKnown RBP26.62■■□□□ 1.85
LDB1-202ENST00000425280 CRTAMO95727 393 aa26.62■■□□□ 1.85
LDB1-202ENST00000425280 SLC35E2BP0CK96 405 aa26.62■■□□□ 1.85
LDB1-202ENST00000425280 RBM23Q86U06 439 aaKnown RBP26.62■■□□□ 1.85
LDB1-202ENST00000425280 CEP97Q8IW35 865 aa26.62■■□□□ 1.85
LDB1-202ENST00000425280 PNPLA1Q8N8W4 532 aa26.62■■□□□ 1.85
LDB1-202ENST00000425280 GPATCH11Q8N954 259 aa26.62■■□□□ 1.85
LDB1-202ENST00000425280 ZNF707Q96C28 371 aaPredicted RBP26.62■■□□□ 1.85
LDB1-202ENST00000425280 C1QTNF1Q9BXJ1 281 aa26.62■■□□□ 1.85
LDB1-202ENST00000425280 ADGRE3Q9BY15 652 aa26.62■■□□□ 1.85
LDB1-202ENST00000425280 ZDHHC7Q9NXF8 308 aa26.62■■□□□ 1.85
LDB1-202ENST00000425280 HCFC2Q9Y5Z7 792 aa26.62■■□□□ 1.85
LDB1-202ENST00000425280 GOT2P00505 430 aaKnown RBP26.62■■□□□ 1.85
LDB1-202ENST00000425280 TROVE2P10155 538 aaKnown RBP eCLIP26.62■■□□□ 1.85
LDB1-202ENST00000425280 ZNF140P52738 457 aaPredicted RBP26.62■■□□□ 1.85
LDB1-202ENST00000425280 RAB10P61026 200 aa26.62■■□□□ 1.85
LDB1-202ENST00000425280 TAF1BQ53T94 588 aaPredicted RBP26.62■■□□□ 1.85
LDB1-202ENST00000425280 RALGPS1Q5JS13 557 aa26.62■■□□□ 1.85
LDB1-202ENST00000425280 MBLAC2Q68D91 279 aa26.62■■□□□ 1.85
LDB1-202ENST00000425280 TMEM25Q86YD3 366 aa26.62■■□□□ 1.85
LDB1-202ENST00000425280 LMNTD2Q8IXW0 634 aa26.62■■□□□ 1.85
LDB1-202ENST00000425280 MDGA1Q8NFP4 955 aa26.62■■□□□ 1.85
LDB1-202ENST00000425280 ZSWIM3Q96MP5 696 aa26.62■■□□□ 1.85
LDB1-202ENST00000425280 COPG2Q9UBF2 871 aa26.62■■□□□ 1.85
LDB1-202ENST00000425280 CCDC162PA2VCL2 907 aa26.61■■□□□ 1.85
LDB1-202ENST00000425280 KCNA4P22459 653 aa26.61■■□□□ 1.85
LDB1-202ENST00000425280 PLK1P53350 603 aa26.61■■□□□ 1.85
LDB1-202ENST00000425280 ERVK-21P61565 698 aa26.61■■□□□ 1.85
LDB1-202ENST00000425280 SLC12A1Q13621 1099 aa26.61■■□□□ 1.85
LDB1-202ENST00000425280 TAF1AQ15573 450 aaPredicted RBP26.61■■□□□ 1.85
LDB1-202ENST00000425280 ZCCHC23Q6ZST2 131 aa26.61■■□□□ 1.85
LDB1-202ENST00000425280 GLT6D1Q7Z4J2 308 aa26.61■■□□□ 1.85
LDB1-202ENST00000425280 LDB1Q86U70 411 aaPredicted RBP26.61■■□□□ 1.85
LDB1-202ENST00000425280 PDCD6IPQ8WUM4 868 aaKnown RBP26.61■■□□□ 1.85
LDB1-202ENST00000425280 SAMD11Q96NU1 681 aa26.61■■□□□ 1.85
LDB1-202ENST00000425280 NLE1Q9NVX2 485 aaPredicted RBP26.61■■□□□ 1.85
LDB1-202ENST00000425280 ANKRD66B4E2M5 251 aa26.61■■□□□ 1.85
LDB1-202ENST00000425280 S1PR4O95977 384 aa26.61■■□□□ 1.85
LDB1-202ENST00000425280 FGF3P11487 239 aaPredicted RBP26.61■■□□□ 1.85
LDB1-202ENST00000425280 STMN1P16949 149 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms