RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 JUNDP17535 347 aa16.32■□□□□ 0.2
DDR1-234ENST00000424544 DEKP35659 375 aaKnown RBP16.32■□□□□ 0.2
DDR1-234ENST00000424544 HCAR3P49019 387 aa16.32■□□□□ 0.2
DDR1-234ENST00000424544 DAB2P98082 770 aa16.32■□□□□ 0.2
DDR1-234ENST00000424544 NSUN2Q08J23 767 aaKnown RBP eCLIP16.32■□□□□ 0.2
DDR1-234ENST00000424544 GRM3Q14832 879 aa16.32■□□□□ 0.2
DDR1-234ENST00000424544 LRRC73Q5JTD7 316 aa16.32■□□□□ 0.2
DDR1-234ENST00000424544 ZCCHC8Q6NZY4 707 aaKnown RBP16.32■□□□□ 0.2
DDR1-234ENST00000424544 ZSWIM9Q86XI8 627 aa16.32■□□□□ 0.2
DDR1-234ENST00000424544 DNAAF5Q86Y56 855 aa16.32■□□□□ 0.2
DDR1-234ENST00000424544 PSTKQ8IV42 348 aaKnown RBP16.32■□□□□ 0.2
DDR1-234ENST00000424544 ARHGAP12Q8IWW6 846 aa16.32■□□□□ 0.2
DDR1-234ENST00000424544 ACRBPQ8NEB7 543 aa16.32■□□□□ 0.2
DDR1-234ENST00000424544 TRIM11Q96F44 468 aa16.32■□□□□ 0.2
DDR1-234ENST00000424544 ZNF641Q96N77 438 aaPredicted RBP16.32■□□□□ 0.2
DDR1-234ENST00000424544 TRIM7Q9C029 511 aa16.32■□□□□ 0.2
DDR1-234ENST00000424544 TCEAL2Q9H3H9 227 aaPredicted RBP16.32■□□□□ 0.2
DDR1-234ENST00000424544 GPATCH2LQ9NWQ4 482 aa16.32■□□□□ 0.2
DDR1-234ENST00000424544 UBA2Q9UBT2 640 aaPredicted RBP16.32■□□□□ 0.2
DDR1-234ENST00000424544 AP4E1Q9UPM8 1137 aa16.32■□□□□ 0.2
DDR1-234ENST00000424544 REXO2Q9Y3B8 237 aaKnown RBP16.32■□□□□ 0.2
DDR1-234ENST00000424544 AK5Q9Y6K8 562 aa16.32■□□□□ 0.2
DDR1-234ENST00000424544 RP1P56715 2156 aa16.31■□□□□ 0.2
DDR1-234ENST00000424544 EME2A4GXA9 379 aaPredicted RBP16.31■□□□□ 0.2
DDR1-234ENST00000424544 AQP9O43315 295 aa16.31■□□□□ 0.2
DDR1-234ENST00000424544 MYBL1P10243 752 aa16.31■□□□□ 0.2
DDR1-234ENST00000424544 PSMA2P25787 234 aa16.31■□□□□ 0.2
DDR1-234ENST00000424544 MIPP30301 263 aa16.31■□□□□ 0.2
DDR1-234ENST00000424544 RGRP47804 291 aa16.31■□□□□ 0.2
DDR1-234ENST00000424544 PAPOLAP51003 745 aaKnown RBP16.31■□□□□ 0.2
DDR1-234ENST00000424544 DUSP3P51452 185 aaPredicted RBP16.31■□□□□ 0.2
DDR1-234ENST00000424544 TPI1P60174 286 aa16.31■□□□□ 0.2
DDR1-234ENST00000424544 SEMG2Q02383 582 aa16.31■□□□□ 0.2
DDR1-234ENST00000424544 PTK2BQ14289 1009 aa16.31■□□□□ 0.2
DDR1-234ENST00000424544 TXLNBQ8N3L3 684 aa16.31■□□□□ 0.2
DDR1-234ENST00000424544 BTN2A2Q8WVV5 523 aa16.31■□□□□ 0.2
DDR1-234ENST00000424544 SPOCK2Q92563 424 aa16.31■□□□□ 0.2
DDR1-234ENST00000424544 FGF11Q92914 225 aa16.31■□□□□ 0.2
DDR1-234ENST00000424544 ECHDC3Q96DC8 303 aa16.31■□□□□ 0.2
DDR1-234ENST00000424544 CRELD1Q96HD1 420 aa16.31■□□□□ 0.2
DDR1-234ENST00000424544 NSMCE3Q96MG7 304 aa16.31■□□□□ 0.2
DDR1-234ENST00000424544 BBC3Q96PG8 261 aaPredicted RBP16.31■□□□□ 0.2
DDR1-234ENST00000424544 KCTD15Q96SI1 283 aaPredicted RBP16.31■□□□□ 0.2
DDR1-234ENST00000424544 DESI2Q9BSY9 194 aa16.31■□□□□ 0.2
DDR1-234ENST00000424544 BOCQ9BWV1 1114 aa16.31■□□□□ 0.2
DDR1-234ENST00000424544 IPO11Q9UI26 975 aaKnown RBP16.31■□□□□ 0.2
DDR1-234ENST00000424544 PCDHB1Q9Y5F3 818 aa16.31■□□□□ 0.2
DDR1-234ENST00000424544 BAHCC1Q9P281 2608 aa16.31■□□□□ 0.2
DDR1-234ENST00000424544 CFAP69A5D8W1 941 aa16.3■□□□□ 0.2
DDR1-234ENST00000424544 LMO7DNF2Z398 122 aa16.3■□□□□ 0.2
DDR1-234ENST00000424544 H3BM21 787 aa16.3■□□□□ 0.2
DDR1-234ENST00000424544 EEF2KO00418 725 aaKnown RBP16.3■□□□□ 0.2
DDR1-234ENST00000424544 PIGNO95427 931 aa16.3■□□□□ 0.2
DDR1-234ENST00000424544 CCDC175P0C221 793 aa16.3■□□□□ 0.2
DDR1-234ENST00000424544 TMEM253P0C7T8 217 aa16.3■□□□□ 0.2
DDR1-234ENST00000424544 ERCC2P18074 760 aa16.3■□□□□ 0.2
DDR1-234ENST00000424544 ITPKBP27987 946 aa16.3■□□□□ 0.2
DDR1-234ENST00000424544 PEX5P50542 639 aa16.3■□□□□ 0.2
DDR1-234ENST00000424544 VAV2P52735 878 aa16.3■□□□□ 0.2
DDR1-234ENST00000424544 WSCD2Q2TBF2 565 aa16.3■□□□□ 0.2
DDR1-234ENST00000424544 KIAA1328Q86T90 577 aa16.3■□□□□ 0.2
DDR1-234ENST00000424544 ZNF354CQ86Y25 554 aa16.3■□□□□ 0.2
DDR1-234ENST00000424544 CAMK1DQ8IU85 385 aa16.3■□□□□ 0.2
DDR1-234ENST00000424544 CXorf40AQ8TE69 158 aa16.3■□□□□ 0.2
DDR1-234ENST00000424544 CTNNBL1Q8WYA6 563 aaPredicted RBP16.3■□□□□ 0.2
DDR1-234ENST00000424544 CELF6Q96J87 481 aaKnown RBP16.3■□□□□ 0.2
DDR1-234ENST00000424544 EXOC2Q96KP1 924 aa16.3■□□□□ 0.2
DDR1-234ENST00000424544 TUBGCP5Q96RT8 1024 aa16.3■□□□□ 0.2
DDR1-234ENST00000424544 SNRNP25Q9BV90 132 aaKnown RBP16.3■□□□□ 0.2
DDR1-234ENST00000424544 PACSIN1Q9BY11 444 aa16.3■□□□□ 0.2
DDR1-234ENST00000424544 CLPBQ9H078 707 aa16.3■□□□□ 0.2
DDR1-234ENST00000424544 DHX35Q9H5Z1 703 aaKnown RBP16.3■□□□□ 0.2
DDR1-234ENST00000424544 PCDH12Q9NPG4 1184 aa16.3■□□□□ 0.2
DDR1-234ENST00000424544 NCKIPSDQ9NZQ3 722 aa16.3■□□□□ 0.2
DDR1-234ENST00000424544 SPASTQ9UBP0 616 aa16.3■□□□□ 0.2
DDR1-234ENST00000424544 CNOT8Q9UFF9 292 aaKnown RBP16.3■□□□□ 0.2
DDR1-234ENST00000424544 LRRK1Q38SD2 2015 aa16.29■□□□□ 0.2
DDR1-234ENST00000424544 COL27A1Q8IZC6 1860 aaPredicted RBP16.29■□□□□ 0.2
DDR1-234ENST00000424544 MGAQ8IWI9 3026 aa16.29■□□□□ 0.2
DDR1-234ENST00000424544 ARHGAP42A6NI28 874 aa16.29■□□□□ 0.2
DDR1-234ENST00000424544 YY2O15391 372 aa16.29■□□□□ 0.2
DDR1-234ENST00000424544 ATMINO43313 823 aaPredicted RBP16.29■□□□□ 0.2
DDR1-234ENST00000424544 BRINP1O60477 761 aa16.29■□□□□ 0.2
DDR1-234ENST00000424544 LRCH4O75427 683 aa16.29■□□□□ 0.2
DDR1-234ENST00000424544 DXOO77932 396 aaKnown RBP16.29■□□□□ 0.2
DDR1-234ENST00000424544 TGM2P21980 687 aa16.29■□□□□ 0.2
DDR1-234ENST00000424544 PCK1P35558 622 aa16.29■□□□□ 0.2
DDR1-234ENST00000424544 ZNF135P52742 658 aaPredicted RBP16.29■□□□□ 0.2
DDR1-234ENST00000424544 ELP6Q0PNE2 266 aa16.29■□□□□ 0.2
DDR1-234ENST00000424544 DPYSQ14117 519 aa16.29■□□□□ 0.2
DDR1-234ENST00000424544 DEFB133Q30KQ1 61 aa16.29■□□□□ 0.2
DDR1-234ENST00000424544 BRAT1Q6PJG6 821 aa16.29■□□□□ 0.2
DDR1-234ENST00000424544 MACC1Q6ZN28 852 aa16.29■□□□□ 0.2
DDR1-234ENST00000424544 ARHGAP36Q6ZRI8 547 aa16.29■□□□□ 0.2
DDR1-234ENST00000424544 RFX8Q6ZV50 586 aa16.29■□□□□ 0.2
DDR1-234ENST00000424544 SRLQ86TD4 932 aa16.29■□□□□ 0.2
DDR1-234ENST00000424544 RBFAQ8N0V3 343 aa16.29■□□□□ 0.2
DDR1-234ENST00000424544 NPWQ8N729 165 aa16.29■□□□□ 0.2
DDR1-234ENST00000424544 TSEN2Q8NCE0 465 aaKnown RBP16.29■□□□□ 0.2
DDR1-234ENST00000424544 ZNF653Q96CK0 615 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms