RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 SPEM2Q0P670 501 aa25.56■■□□□ 1.68
TSPAN3-203ENST00000424443 SGCGQ13326 291 aa25.56■■□□□ 1.68
TSPAN3-203ENST00000424443 SNX1Q13596 522 aa25.56■■□□□ 1.68
TSPAN3-203ENST00000424443 CCDC6Q16204 474 aa25.56■■□□□ 1.68
TSPAN3-203ENST00000424443 PCSK7Q16549 785 aa25.56■■□□□ 1.68
TSPAN3-203ENST00000424443 CCNG2Q16589 344 aa25.56■■□□□ 1.68
TSPAN3-203ENST00000424443 HS1BP3Q53T59 392 aa25.56■■□□□ 1.68
TSPAN3-203ENST00000424443 ANKRD20A2Q5SQ80 823 aa25.56■■□□□ 1.68
TSPAN3-203ENST00000424443 ANKRD20A1Q5TYW2 823 aa25.56■■□□□ 1.68
TSPAN3-203ENST00000424443 ANKRD20A3Q5VUR7 823 aa25.56■■□□□ 1.68
TSPAN3-203ENST00000424443 USP45Q70EL2 814 aa25.56■■□□□ 1.68
TSPAN3-203ENST00000424443 ZCCHC9Q8N567 271 aaKnown RBP25.56■■□□□ 1.68
TSPAN3-203ENST00000424443 FAM71DQ8N9W8 422 aa25.56■■□□□ 1.68
TSPAN3-203ENST00000424443 SPATA22Q8NHS9 363 aa25.56■■□□□ 1.68
TSPAN3-203ENST00000424443 SPOCK2Q92563 424 aa25.56■■□□□ 1.68
TSPAN3-203ENST00000424443 IFT43Q96FT9 208 aa25.56■■□□□ 1.68
TSPAN3-203ENST00000424443 WDR24Q96S15 920 aa25.56■■□□□ 1.68
TSPAN3-203ENST00000424443 ADGRE3Q9BY15 652 aa25.56■■□□□ 1.68
TSPAN3-203ENST00000424443 USP29Q9HBJ7 922 aa25.56■■□□□ 1.68
TSPAN3-203ENST00000424443 HOMER3Q9NSC5 361 aa25.56■■□□□ 1.68
TSPAN3-203ENST00000424443 LATO43561 262 aa25.55■■□□□ 1.68
TSPAN3-203ENST00000424443 STIP1P31948 543 aaKnown RBP25.55■■□□□ 1.68
TSPAN3-203ENST00000424443 PRPSAP1Q14558 356 aa25.55■■□□□ 1.68
TSPAN3-203ENST00000424443 SLC14A2Q15849 920 aa25.55■■□□□ 1.68
TSPAN3-203ENST00000424443 DUOXA1Q1HG43 343 aa25.55■■□□□ 1.68
TSPAN3-203ENST00000424443 SEL1L3Q68CR1 1132 aa25.55■■□□□ 1.68
TSPAN3-203ENST00000424443 RASGEF1CQ8N431 466 aa25.55■■□□□ 1.68
TSPAN3-203ENST00000424443 KLK6Q92876 244 aa25.55■■□□□ 1.68
TSPAN3-203ENST00000424443 SPATA13Q96N96 652 aa25.55■■□□□ 1.68
TSPAN3-203ENST00000424443 FCRL5Q96RD9 977 aa25.55■■□□□ 1.68
TSPAN3-203ENST00000424443 WRAP53Q9BUR4 548 aaKnown RBP25.55■■□□□ 1.68
TSPAN3-203ENST00000424443 FAM153AQ9UHL3 310 aa25.55■■□□□ 1.68
TSPAN3-203ENST00000424443 ZFR2Q9UPR6 939 aaKnown RBP25.55■■□□□ 1.68
TSPAN3-203ENST00000424443 DMTF1Q9Y222 760 aa25.55■■□□□ 1.68
TSPAN3-203ENST00000424443 GON4LQ3T8J9 2241 aa25.55■■□□□ 1.68
TSPAN3-203ENST00000424443 TNRC6BQ9UPQ9 1833 aaKnown RBP25.55■■□□□ 1.68
TSPAN3-203ENST00000424443 ZFHX2Q9C0A1 2572 aaPredicted RBP25.55■■□□□ 1.68
TSPAN3-203ENST00000424443 A0A1B0GTW7 788 aa25.54■■□□□ 1.68
TSPAN3-203ENST00000424443 PRR5-ARHGAP8B1AHC4 643 aa25.54■■□□□ 1.68
TSPAN3-203ENST00000424443 F5H423 210 aaPredicted RBP25.54■■□□□ 1.68
TSPAN3-203ENST00000424443 PGRMC1O00264 195 aaKnown RBP25.54■■□□□ 1.68
TSPAN3-203ENST00000424443 CES2O00748 559 aa25.54■■□□□ 1.68
TSPAN3-203ENST00000424443 BCAT2O15382 392 aaPredicted RBP25.54■■□□□ 1.68
TSPAN3-203ENST00000424443 SLC31A1O15431 190 aa25.54■■□□□ 1.68
TSPAN3-203ENST00000424443 OPHN1O60890 802 aa25.54■■□□□ 1.68
TSPAN3-203ENST00000424443 MT-CYBP00156 380 aaPredicted RBP25.54■■□□□ 1.68
TSPAN3-203ENST00000424443 CFIP05156 583 aa25.54■■□□□ 1.68
TSPAN3-203ENST00000424443 PDHA1P08559 390 aa25.54■■□□□ 1.68
TSPAN3-203ENST00000424443 CYP2A6P11509 494 aaPredicted RBP25.54■■□□□ 1.68
TSPAN3-203ENST00000424443 RPL26P61254 145 aaKnown RBP25.54■■□□□ 1.68
TSPAN3-203ENST00000424443 TMEM52BQ4KMG9 183 aa25.54■■□□□ 1.68
TSPAN3-203ENST00000424443 CCDC70Q6NSX1 233 aa25.54■■□□□ 1.68
TSPAN3-203ENST00000424443 ARHGEF18Q6ZSZ5 1173 aa25.54■■□□□ 1.68
TSPAN3-203ENST00000424443 DCLK2Q8N568 766 aa25.54■■□□□ 1.68
TSPAN3-203ENST00000424443 LPCAT1Q8NF37 534 aa25.54■■□□□ 1.68
TSPAN3-203ENST00000424443 CCDC110Q8TBZ0 833 aa25.54■■□□□ 1.68
TSPAN3-203ENST00000424443 RMDN1Q96DB5 314 aa25.54■■□□□ 1.68
TSPAN3-203ENST00000424443 MS4A14Q96JA4 679 aa25.54■■□□□ 1.68
TSPAN3-203ENST00000424443 SERAC1Q96JX3 654 aa25.54■■□□□ 1.68
TSPAN3-203ENST00000424443 SLC17A9Q9BYT1 436 aa25.54■■□□□ 1.68
TSPAN3-203ENST00000424443 GBA3Q9H227 469 aa25.54■■□□□ 1.68
TSPAN3-203ENST00000424443 UBP1Q9NZI7 540 aa25.54■■□□□ 1.68
TSPAN3-203ENST00000424443 RPL26L1Q9UNX3 145 aaKnown RBP25.54■■□□□ 1.68
TSPAN3-203ENST00000424443 GPR179Q6PRD1 2367 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 C5orf60A6NFR6 353 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 IGLON5A6NGN9 336 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 SPINT1O43278 529 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 FZD6O60353 706 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 MMP20O60882 483 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 PMPCBO75439 489 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 TM7SF2O76062 418 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 ACTN2P35609 894 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 MMP12P39900 470 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 IHHQ14623 411 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 SIX1Q15475 284 aaPredicted RBP25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 ZNF284Q2VY69 593 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 TMEM259Q4ZIN3 620 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 PEAR1Q5VY43 1037 aaPredicted RBP25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 KDELC2Q7Z4H8 507 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 PIH1D2Q8WWB5 315 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 PPP1R2P1Q96PQ5 205 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 NUSAP1Q9BXS6 441 aaKnown RBP25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 AASDHPPTQ9NRN7 309 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 SEMA4GQ9NTN9 838 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 TTC7AQ9ULT0 858 aaPredicted RBP25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 RALGAPA1Q6GYQ0 2036 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 KHNYNO15037 678 aaKnown RBP25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 ANXA9O76027 345 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 SEMG2Q02383 582 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 CDK18Q07002 472 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 OASLQ15646 514 aaKnown RBP25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 TRIM61Q5EBN2 209 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 PLA2G2CQ5R387 149 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 DPPA4Q7L190 304 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 GPR161Q8N6U8 529 aaKnown RBP25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 COG1Q8WTW3 980 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 SCRN2Q96FV2 425 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 C1QTNF7Q9BXJ2 289 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 EBF2Q9HAK2 575 aa25.53■■□□□ 1.68
TSPAN3-203ENST00000424443 A8MX80 341 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms