RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 R3HDM2Q9Y2K5 976 aaKnown RBP18.59■□□□□ 0.57
HDAC6-205ENST00000423941 PCDHB9Q9Y5E1 797 aa18.59■□□□□ 0.57
HDAC6-205ENST00000423941 RAI2Q9Y5P3 530 aa18.59■□□□□ 0.57
HDAC6-205ENST00000423941 GOLGA6L9A6NEM1 432 aa18.58■□□□□ 0.56
HDAC6-205ENST00000423941 KCNK3O14649 394 aa18.58■□□□□ 0.56
HDAC6-205ENST00000423941 WNT9AO14904 365 aa18.58■□□□□ 0.56
HDAC6-205ENST00000423941 KHNYNO15037 678 aaKnown RBP18.58■□□□□ 0.56
HDAC6-205ENST00000423941 GRIA4P48058 902 aa18.58■□□□□ 0.56
HDAC6-205ENST00000423941 BNC1Q01954 994 aa18.58■□□□□ 0.56
HDAC6-205ENST00000423941 ITKQ08881 620 aa18.58■□□□□ 0.56
HDAC6-205ENST00000423941 RALGDSQ12967 914 aa18.58■□□□□ 0.56
HDAC6-205ENST00000423941 SIX1Q15475 284 aaPredicted RBP18.58■□□□□ 0.56
HDAC6-205ENST00000423941 SETMARQ53H47 684 aaPredicted RBP18.58■□□□□ 0.56
HDAC6-205ENST00000423941 TRIM61Q5EBN2 209 aa18.58■□□□□ 0.56
HDAC6-205ENST00000423941 FAM182AQ5T1J6 154 aa18.58■□□□□ 0.56
HDAC6-205ENST00000423941 SEL1L2Q5TEA6 688 aa18.58■□□□□ 0.56
HDAC6-205ENST00000423941 CCDC181Q5TID7 509 aa18.58■□□□□ 0.56
HDAC6-205ENST00000423941 TCEAL6Q6IPX3 200 aa18.58■□□□□ 0.56
HDAC6-205ENST00000423941 TCEAL3Q969E4 200 aa18.58■□□□□ 0.56
HDAC6-205ENST00000423941 SCRN2Q96FV2 425 aa18.58■□□□□ 0.56
HDAC6-205ENST00000423941 MCCC1Q96RQ3 725 aaPredicted RBP18.58■□□□□ 0.56
HDAC6-205ENST00000423941 TRIB3Q96RU7 358 aa18.58■□□□□ 0.56
HDAC6-205ENST00000423941 KLF6Q99612 283 aaPredicted RBP18.58■□□□□ 0.56
HDAC6-205ENST00000423941 HINFPQ9BQA5 517 aa18.58■□□□□ 0.56
HDAC6-205ENST00000423941 TDRD1Q9BXT4 1180 aaKnown RBP18.58■□□□□ 0.56
HDAC6-205ENST00000423941 SLC17A9Q9BYT1 436 aa18.58■□□□□ 0.56
HDAC6-205ENST00000423941 RXFP3Q9NSD7 469 aa18.58■□□□□ 0.56
HDAC6-205ENST00000423941 TRHDEQ9UKU6 1024 aa18.58■□□□□ 0.56
HDAC6-205ENST00000423941 LNP1A1A4G5 178 aa18.57■□□□□ 0.56
HDAC6-205ENST00000423941 IGLON5A6NGN9 336 aa18.57■□□□□ 0.56
HDAC6-205ENST00000423941 PRAMEF26H0Y7S4 382 aa18.57■□□□□ 0.56
HDAC6-205ENST00000423941 H7C0C1 242 aa18.57■□□□□ 0.56
HDAC6-205ENST00000423941 VILLO15195 856 aa18.57■□□□□ 0.56
HDAC6-205ENST00000423941 ZNF189O75820 626 aaPredicted RBP18.57■□□□□ 0.56
HDAC6-205ENST00000423941 NEBLO76041 1014 aa18.57■□□□□ 0.56
HDAC6-205ENST00000423941 MAT2AP31153 395 aaKnown RBP18.57■□□□□ 0.56
HDAC6-205ENST00000423941 ATP5OP48047 213 aa18.57■□□□□ 0.56
HDAC6-205ENST00000423941 AFF3P51826 1226 aaKnown RBP18.57■□□□□ 0.56
HDAC6-205ENST00000423941 RPL26P61254 145 aaKnown RBP18.57■□□□□ 0.56
HDAC6-205ENST00000423941 LRRC73Q5JTD7 316 aa18.57■□□□□ 0.56
HDAC6-205ENST00000423941 ZNF569Q5MCW4 686 aa18.57■□□□□ 0.56
HDAC6-205ENST00000423941 ARMC12Q5T9G4 340 aa18.57■□□□□ 0.56
HDAC6-205ENST00000423941 NAPEPLDQ6IQ20 393 aa18.57■□□□□ 0.56
HDAC6-205ENST00000423941 DPPA4Q7L190 304 aa18.57■□□□□ 0.56
HDAC6-205ENST00000423941 ZCCHC9Q8N567 271 aaKnown RBP18.57■□□□□ 0.56
HDAC6-205ENST00000423941 SNX19Q92543 992 aa18.57■□□□□ 0.56
HDAC6-205ENST00000423941 FCRL5Q96RD9 977 aa18.57■□□□□ 0.56
HDAC6-205ENST00000423941 NUSAP1Q9BXS6 441 aaKnown RBP18.57■□□□□ 0.56
HDAC6-205ENST00000423941 FRMD8P1Q9BZ68 369 aaPredicted RBP18.57■□□□□ 0.56
HDAC6-205ENST00000423941 MIR1-1HGQ9H1L0 117 aa18.57■□□□□ 0.56
HDAC6-205ENST00000423941 C10orf88Q9H8K7 445 aa18.57■□□□□ 0.56
HDAC6-205ENST00000423941 SEPT10Q9P0V9 454 aa18.57■□□□□ 0.56
HDAC6-205ENST00000423941 RPL26L1Q9UNX3 145 aaKnown RBP18.57■□□□□ 0.56
HDAC6-205ENST00000423941 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.57■□□□□ 0.56
HDAC6-205ENST00000423941 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.57■□□□□ 0.56
HDAC6-205ENST00000423941 TP53BP1Q12888 1972 aaPredicted RBP18.57■□□□□ 0.56
HDAC6-205ENST00000423941 CDX4O14627 284 aaPredicted RBP18.56■□□□□ 0.56
HDAC6-205ENST00000423941 PAK4O96013 591 aaPredicted RBP18.56■□□□□ 0.56
HDAC6-205ENST00000423941 CPP00450 1065 aa18.56■□□□□ 0.56
HDAC6-205ENST00000423941 WNT1P04628 370 aa18.56■□□□□ 0.56
HDAC6-205ENST00000423941 HNRNPA2B1P22626 353 aaKnown RBP18.56■□□□□ 0.56
HDAC6-205ENST00000423941 CD86P42081 329 aa18.56■□□□□ 0.56
HDAC6-205ENST00000423941 CFAP58Q5T655 872 aa18.56■□□□□ 0.56
HDAC6-205ENST00000423941 LIPIQ6XZB0 460 aa18.56■□□□□ 0.56
HDAC6-205ENST00000423941 PID1Q7Z2X4 250 aa18.56■□□□□ 0.56
HDAC6-205ENST00000423941 IQCHQ86VS3 1027 aa18.56■□□□□ 0.56
HDAC6-205ENST00000423941 CDKL3Q8IVW4 592 aaPredicted RBP18.56■□□□□ 0.56
HDAC6-205ENST00000423941 KLHDC8BQ8IXV7 354 aa18.56■□□□□ 0.56
HDAC6-205ENST00000423941 SLC35F6Q8N357 371 aa18.56■□□□□ 0.56
HDAC6-205ENST00000423941 RASGEF1CQ8N431 466 aa18.56■□□□□ 0.56
HDAC6-205ENST00000423941 MFSD2AQ8NA29 543 aa18.56■□□□□ 0.56
HDAC6-205ENST00000423941 CENPTQ96BT3 561 aa18.56■□□□□ 0.56
HDAC6-205ENST00000423941 SERAC1Q96JX3 654 aa18.56■□□□□ 0.56
HDAC6-205ENST00000423941 SLC6A18Q96N87 628 aa18.56■□□□□ 0.56
HDAC6-205ENST00000423941 RBM15Q96T37 977 aaKnown RBP eCLIP18.56■□□□□ 0.56
HDAC6-205ENST00000423941 FAM118BQ9BPY3 351 aa18.56■□□□□ 0.56
HDAC6-205ENST00000423941 ZDHHC5Q9C0B5 715 aa18.56■□□□□ 0.56
HDAC6-205ENST00000423941 HS3ST3A1Q9Y663 406 aa18.56■□□□□ 0.56
HDAC6-205ENST00000423941 C5orf60A6NFR6 353 aa18.55■□□□□ 0.56
HDAC6-205ENST00000423941 ARHGAP33O14559 1287 aa18.55■□□□□ 0.56
HDAC6-205ENST00000423941 ENC1O14682 589 aa18.55■□□□□ 0.56
HDAC6-205ENST00000423941 SLC31A1O15431 190 aa18.55■□□□□ 0.56
HDAC6-205ENST00000423941 MMP20O60882 483 aa18.55■□□□□ 0.56
HDAC6-205ENST00000423941 GM2AP17900 193 aa18.55■□□□□ 0.56
HDAC6-205ENST00000423941 XPAP23025 273 aaPredicted RBP18.55■□□□□ 0.56
HDAC6-205ENST00000423941 CD38P28907 300 aa18.55■□□□□ 0.56
HDAC6-205ENST00000423941 CSNK1EP49674 416 aaKnown RBP18.55■□□□□ 0.56
HDAC6-205ENST00000423941 LIMK1P53667 647 aa18.55■□□□□ 0.56
HDAC6-205ENST00000423941 OVGP1Q12889 678 aa18.55■□□□□ 0.56
HDAC6-205ENST00000423941 OASLQ15646 514 aaKnown RBP18.55■□□□□ 0.56
HDAC6-205ENST00000423941 ERAP2Q6P179 960 aa18.55■□□□□ 0.56
HDAC6-205ENST00000423941 DRICH1Q6PGQ1 229 aaPredicted RBP18.55■□□□□ 0.56
HDAC6-205ENST00000423941 DARS2Q6PI48 645 aaKnown RBP18.55■□□□□ 0.56
HDAC6-205ENST00000423941 ABI3BPQ7Z7G0 1075 aa18.55■□□□□ 0.56
HDAC6-205ENST00000423941 KIAA2013Q8IYS2 634 aa18.55■□□□□ 0.56
HDAC6-205ENST00000423941 SPATA22Q8NHS9 363 aa18.55■□□□□ 0.56
HDAC6-205ENST00000423941 KLK6Q92876 244 aa18.55■□□□□ 0.56
HDAC6-205ENST00000423941 RTP4Q96DX8 246 aa18.55■□□□□ 0.56
HDAC6-205ENST00000423941 BMFQ96LC9 184 aa18.55■□□□□ 0.56
HDAC6-205ENST00000423941 LYSMD1Q96S90 227 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms