RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 DCP2Q8IU60 420 aaKnown RBP11.03□□□□□ -0.64
USP49-204ENST00000423567 CCDC50Q8IVM0 306 aa11.03□□□□□ -0.64
USP49-204ENST00000423567 CCDC13Q8IYE1 715 aa11.03□□□□□ -0.64
USP49-204ENST00000423567 NDUFAF2Q8N183 169 aa11.03□□□□□ -0.64
USP49-204ENST00000423567 PDCD6IPQ8WUM4 868 aaKnown RBP11.03□□□□□ -0.64
USP49-204ENST00000423567 VOPP1Q96AW1 172 aa11.03□□□□□ -0.64
USP49-204ENST00000423567 TSGA13Q96PP4 275 aa11.03□□□□□ -0.64
USP49-204ENST00000423567 LENG8Q96PV6 779 aaPredicted RBP11.03□□□□□ -0.64
USP49-204ENST00000423567 CDC6Q99741 560 aa11.03□□□□□ -0.64
USP49-204ENST00000423567 WRAP53Q9BUR4 548 aaKnown RBP11.03□□□□□ -0.64
USP49-204ENST00000423567 NT5MQ9NPB1 228 aa11.03□□□□□ -0.64
USP49-204ENST00000423567 PCDH12Q9NPG4 1184 aa11.03□□□□□ -0.64
USP49-204ENST00000423567 RBM22Q9NW64 420 aaKnown RBP eCLIP11.03□□□□□ -0.64
USP49-204ENST00000423567 AMACRQ9UHK6 382 aa11.03□□□□□ -0.64
USP49-204ENST00000423567 ATP8A1Q9Y2Q0 1164 aa11.03□□□□□ -0.64
USP49-204ENST00000423567 TTLL3Q9Y4R7 772 aa11.03□□□□□ -0.64
USP49-204ENST00000423567 HEY1Q9Y5J3 304 aa11.03□□□□□ -0.64
USP49-204ENST00000423567 PPP1R12AO14974 1030 aaPredicted RBP11.02□□□□□ -0.65
USP49-204ENST00000423567 SPINT1O43278 529 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 LZTS3O60299 673 aaPredicted RBP11.02□□□□□ -0.65
USP49-204ENST00000423567 ZRANB2O95218 330 aaKnown RBP eCLIP11.02□□□□□ -0.65
USP49-204ENST00000423567 CPP00450 1065 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 CCNB1P14635 433 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 CR2P20023 1033 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 CA4P22748 312 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 EPHA8P29322 1005 aaPredicted RBP11.02□□□□□ -0.65
USP49-204ENST00000423567 RABIFP47224 123 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 CLDN2P57739 230 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 MAXP61244 160 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 DYNLT1P63172 113 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 KIF5AQ12840 1032 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 HS1BP3Q53T59 392 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 SLC9A4Q6AI14 798 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 RAD9BQ6WBX8 426 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 KYAT3Q6YP21 454 aaKnown RBP11.02□□□□□ -0.65
USP49-204ENST00000423567 GCNT7Q6ZNI0 430 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 Q6ZSR6 202 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 ABI3BPQ7Z7G0 1075 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 RCOR2Q8IZ40 523 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 PGBD5Q8N414 524 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 TEX26Q8N6G2 289 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 PLD5Q8N7P1 536 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 ACRBPQ8NEB7 543 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 TPCN2Q8NHX9 752 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 FATE1Q969F0 183 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 HDAC11Q96DB2 347 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 ECHDC3Q96DC8 303 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 RBM41Q96IZ5 413 aaKnown RBP11.02□□□□□ -0.65
USP49-204ENST00000423567 SEMA3CQ99985 751 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 BRD8Q9H0E9 1235 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 NOD2Q9HC29 1040 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 DTLQ9NZJ0 730 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 PCOLCE2Q9UKZ9 415 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 TFR2Q9UP52 801 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 PCDHGC4Q9Y5F7 938 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 CACNA1EQ15878 2313 aa11.02□□□□□ -0.65
USP49-204ENST00000423567 SPAARA0A1B0GVQ0 90 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 TTC24A2A3L6 582 aaPredicted RBP11.01□□□□□ -0.65
USP49-204ENST00000423567 CFAP69A5D8W1 941 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 C3orf70A6NLC5 250 aaPredicted RBP11.01□□□□□ -0.65
USP49-204ENST00000423567 BTNL10A8MVZ5 291 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 TRAFD1O14545 582 aaPredicted RBP11.01□□□□□ -0.65
USP49-204ENST00000423567 TOR1BO14657 336 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 ELFN1P0C7U0 828 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 CYP2A6P11509 494 aaPredicted RBP11.01□□□□□ -0.65
USP49-204ENST00000423567 C6P13671 934 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 ITIH2P19823 946 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 MMP12P39900 470 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 CETN2P41208 172 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 RXRGP48443 463 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 NR2C2P49116 596 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 LIG3P49916 1009 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 THOP1P52888 689 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 PPIDQ08752 370 aaKnown RBP11.01□□□□□ -0.65
USP49-204ENST00000423567 AP1B1Q10567 949 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 PTK2BQ14289 1009 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 FGL2Q14314 439 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 PROX2Q3B8N5 592 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 ARMC12Q5T9G4 340 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 MFSD7Q6UXD7 560 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 SPOCD1Q6ZMY3 1216 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 DBX2Q6ZNG2 339 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 DPPA4Q7L190 304 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 SPATS2Q86XZ4 545 aaKnown RBP11.01□□□□□ -0.65
USP49-204ENST00000423567 KATNAL2Q8IYT4 538 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 SYCE1Q8N0S2 351 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 OR13H1Q8NG92 308 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 KIAA1524Q8TCG1 905 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 MAML1Q92585 1016 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 CAMK1GQ96NX5 476 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 GOLPH3Q9H4A6 298 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 PHTF1Q9UMS5 762 aa11.01□□□□□ -0.65
USP49-204ENST00000423567 ADAMTS9Q9P2N4 1935 aa11□□□□□ -0.65
USP49-204ENST00000423567 RCCD1A6NED2 376 aa11□□□□□ -0.65
USP49-204ENST00000423567 POM121BA6NF01 834 aa11□□□□□ -0.65
USP49-204ENST00000423567 H3BM21 787 aa11□□□□□ -0.65
USP49-204ENST00000423567 RAD51BO15315 384 aa11□□□□□ -0.65
USP49-204ENST00000423567 PJA2O43164 708 aa11□□□□□ -0.65
USP49-204ENST00000423567 HTRA2O43464 458 aaPredicted RBP11□□□□□ -0.65
USP49-204ENST00000423567 NRDCO43847 1150 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms