RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 SLC18A3Q16572 532 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 CFAP58Q5T655 872 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 C19orf48Q6RUI8 117 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 POLNQ7Z5Q5 900 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 HCAR2Q8TDS4 363 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 LMX1AQ8TE12 382 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 RFFLQ8WZ73 363 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 ZNF641Q96N77 438 aaPredicted RBP15.31■□□□□ 0.04
USB1-202ENST00000423271 CSPG4P5Q96PW8 444 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 TUBGCP5Q96RT8 1024 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 NUP85Q9BW27 656 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 SPTLC3Q9NUV7 552 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 ANAPC7Q9UJX3 599 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 ATP8A1Q9Y2Q0 1164 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 GPSM3Q9Y4H4 160 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 NBEAQ8NFP9 2946 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 ADAMTS20P59510 1910 aa15.31■□□□□ 0.04
USB1-202ENST00000423271 TTC24A2A3L6 582 aaPredicted RBP15.3■□□□□ 0.04
USB1-202ENST00000423271 NEMP2A6NFY4 417 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 RIOK3O14730 519 aaKnown RBP15.3■□□□□ 0.04
USB1-202ENST00000423271 AQP9O43315 295 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 AKR1B10O60218 316 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 CYP1A2P05177 515 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 SERPINA4P29622 427 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 ARL4AP40617 200 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 LIG3P49916 1009 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 SUOXP51687 545 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 SLC25A11Q02978 314 aaKnown RBP15.3■□□□□ 0.04
USB1-202ENST00000423271 SLC10A7Q0GE19 358 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 PIGHQ14442 188 aaPredicted RBP15.3■□□□□ 0.04
USB1-202ENST00000423271 ACAP1Q15027 740 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 WSCD2Q2TBF2 565 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 DEFB133Q30KQ1 61 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 BOLA3Q53S33 107 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 ERAP2Q6P179 960 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 BRAT1Q6PJG6 821 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 NYAP1Q6ZVC0 841 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 CPNE8Q86YQ8 564 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 PHACTR4Q8IZ21 702 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 NIPA2Q8N8Q9 360 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 FAM181AQ8N9Y4 354 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 ECHDC3Q96DC8 303 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 NXPE2Q96DL1 559 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 CCDC42Q96M95 316 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 LRRC61Q9BV99 259 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 C1QTNF7Q9BXJ2 289 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 ATP13A3Q9H7F0 1226 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 PCDH18Q9HCL0 1135 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 APOBEC3BQ9UH17 382 aaKnown RBP15.3■□□□□ 0.04
USB1-202ENST00000423271 LHX6Q9UPM6 363 aa15.3■□□□□ 0.04
USB1-202ENST00000423271 SHROOM3Q8TF72 1996 aa15.29■□□□□ 0.04
USB1-202ENST00000423271 GCATO75600 419 aa15.29■□□□□ 0.04
USB1-202ENST00000423271 PEX11BO96011 259 aa15.29■□□□□ 0.04
USB1-202ENST00000423271 SCNN1BP51168 640 aa15.29■□□□□ 0.04
USB1-202ENST00000423271 YPEL5P62699 121 aa15.29■□□□□ 0.04
USB1-202ENST00000423271 RALGDSQ12967 914 aa15.29■□□□□ 0.04
USB1-202ENST00000423271 C1orf61Q13536 156 aa15.29■□□□□ 0.04
USB1-202ENST00000423271 PTK2BQ14289 1009 aa15.29■□□□□ 0.04
USB1-202ENST00000423271 RFTN1Q14699 578 aaPredicted RBP15.29■□□□□ 0.04
USB1-202ENST00000423271 LBRQ14739 615 aaKnown RBP15.29■□□□□ 0.04
USB1-202ENST00000423271 LRRC14Q15048 493 aa15.29■□□□□ 0.04
USB1-202ENST00000423271 TMCO4Q5TGY1 634 aa15.29■□□□□ 0.04
USB1-202ENST00000423271 TMCO3Q6UWJ1 677 aa15.29■□□□□ 0.04
USB1-202ENST00000423271 MACC1Q6ZN28 852 aa15.29■□□□□ 0.04
USB1-202ENST00000423271 LZTR1Q8N653 840 aa15.29■□□□□ 0.04
USB1-202ENST00000423271 DCBLD1Q8N8Z6 715 aa15.29■□□□□ 0.04
USB1-202ENST00000423271 TEKT4Q8WW24 435 aa15.29■□□□□ 0.04
USB1-202ENST00000423271 PSKH2Q96QS6 385 aa15.29■□□□□ 0.04
USB1-202ENST00000423271 PANX2Q96RD6 677 aa15.29■□□□□ 0.04
USB1-202ENST00000423271 DUSP23Q9BVJ7 150 aa15.29■□□□□ 0.04
USB1-202ENST00000423271 PACSIN1Q9BY11 444 aa15.29■□□□□ 0.04
USB1-202ENST00000423271 GRPEL1Q9HAV7 217 aa15.29■□□□□ 0.04
USB1-202ENST00000423271 SEPT3Q9UH03 358 aa15.29■□□□□ 0.04
USB1-202ENST00000423271 IP6K2Q9UHH9 426 aa15.29■□□□□ 0.04
USB1-202ENST00000423271 CLCA2Q9UQC9 943 aa15.29■□□□□ 0.04
USB1-202ENST00000423271 CSNK1G3Q9Y6M4 447 aa15.29■□□□□ 0.04
USB1-202ENST00000423271 LRP4O75096 1905 aa15.29■□□□□ 0.04
USB1-202ENST00000423271 LOC400499M0QZD8 3231 aa15.28■□□□□ 0.04
USB1-202ENST00000423271 GOLGA6L3A6NEY3 463 aa15.28■□□□□ 0.04
USB1-202ENST00000423271 TRAFD1O14545 582 aaPredicted RBP15.28■□□□□ 0.04
USB1-202ENST00000423271 LZTS3O60299 673 aaPredicted RBP15.28■□□□□ 0.04
USB1-202ENST00000423271 OPA1O60313 960 aa15.28■□□□□ 0.04
USB1-202ENST00000423271 MT-CO3P00414 261 aa15.28■□□□□ 0.04
USB1-202ENST00000423271 PCCBP05166 539 aa15.28■□□□□ 0.04
USB1-202ENST00000423271 CELA2BP08218 269 aaPredicted RBP15.28■□□□□ 0.04
USB1-202ENST00000423271 CD48P09326 243 aa15.28■□□□□ 0.04
USB1-202ENST00000423271 FECHP22830 423 aa15.28■□□□□ 0.04
USB1-202ENST00000423271 E2F1Q01094 437 aa15.28■□□□□ 0.04
USB1-202ENST00000423271 BCL2L1Q07817 233 aa15.28■□□□□ 0.04
USB1-202ENST00000423271 NSUN2Q08J23 767 aaKnown RBP eCLIP15.28■□□□□ 0.04
USB1-202ENST00000423271 MMRN1Q13201 1228 aa15.28■□□□□ 0.04
USB1-202ENST00000423271 COL28A1Q2UY09 1125 aa15.28■□□□□ 0.04
USB1-202ENST00000423271 PRRT3Q5FWE3 981 aa15.28■□□□□ 0.04
USB1-202ENST00000423271 ZCCHC8Q6NZY4 707 aaKnown RBP15.28■□□□□ 0.04
USB1-202ENST00000423271 PGBD5Q8N414 524 aa15.28■□□□□ 0.04
USB1-202ENST00000423271 ZNF599Q96NL3 588 aa15.28■□□□□ 0.04
USB1-202ENST00000423271 CLPBQ9H078 707 aa15.28■□□□□ 0.04
USB1-202ENST00000423271 IMPACTQ9P2X3 320 aa15.28■□□□□ 0.04
USB1-202ENST00000423271 SPASTQ9UBP0 616 aa15.28■□□□□ 0.04
USB1-202ENST00000423271 PCDHB1Q9Y5F3 818 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms