RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 CCDC172P0C7W6 258 aa16.29■□□□□ 0.2
COL18A1-205ENST00000423214 PEX5P50542 639 aa16.29■□□□□ 0.2
COL18A1-205ENST00000423214 HK3P52790 923 aa16.29■□□□□ 0.2
COL18A1-205ENST00000423214 NFATC4Q14934 902 aa16.29■□□□□ 0.2
COL18A1-205ENST00000423214 BRAT1Q6PJG6 821 aa16.29■□□□□ 0.2
COL18A1-205ENST00000423214 ENPP7Q6UWV6 458 aa16.29■□□□□ 0.2
COL18A1-205ENST00000423214 GKN2Q86XP6 184 aa16.29■□□□□ 0.2
COL18A1-205ENST00000423214 ARL14Q8N4G2 192 aa16.29■□□□□ 0.2
COL18A1-205ENST00000423214 KYQ8NBH2 561 aa16.29■□□□□ 0.2
COL18A1-205ENST00000423214 WDR36Q8NI36 951 aaKnown RBP16.29■□□□□ 0.2
COL18A1-205ENST00000423214 HCAR2Q8TDS4 363 aa16.29■□□□□ 0.2
COL18A1-205ENST00000423214 SUV39H2Q9H5I1 410 aa16.29■□□□□ 0.2
COL18A1-205ENST00000423214 PCDH12Q9NPG4 1184 aa16.29■□□□□ 0.2
COL18A1-205ENST00000423214 LIMA1Q9UHB6 759 aaKnown RBP16.29■□□□□ 0.2
COL18A1-205ENST00000423214 AP4E1Q9UPM8 1137 aa16.29■□□□□ 0.2
COL18A1-205ENST00000423214 TCRBV5S1A1TA0A578 114 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 TSPAN11A1L157 253 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 ARHGAP42A6NI28 874 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 CELA2BP08218 269 aaPredicted RBP16.28■□□□□ 0.2
COL18A1-205ENST00000423214 FERP16591 822 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 CDK11BP21127 795 aaKnown RBP16.28■□□□□ 0.2
COL18A1-205ENST00000423214 SERPINA4P29622 427 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 MMP12P39900 470 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 NDST2P52849 883 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 CFHR1Q03591 330 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 TYRO3Q06418 890 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 CYTH1Q15438 398 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 UGP2Q16851 508 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 ALG11Q2TAA5 492 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 WSCD2Q2TBF2 565 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 RD3Q7Z3Z2 195 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 TSACCQ96A04 125 aaPredicted RBP16.28■□□□□ 0.2
COL18A1-205ENST00000423214 CCDC74AQ96AQ1 378 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 CELF6Q96J87 481 aaKnown RBP16.28■□□□□ 0.2
COL18A1-205ENST00000423214 ZNF641Q96N77 438 aaPredicted RBP16.28■□□□□ 0.2
COL18A1-205ENST00000423214 SLC46A1Q96NT5 459 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 ERGIC2Q96RQ1 377 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 TUBGCP5Q96RT8 1024 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 APOOQ9BUR5 198 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 EDEM3Q9BZQ6 932 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 ATP13A3Q9H7F0 1226 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 SP110Q9HB58 689 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 PDFQ9HBH1 243 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 EPB41L5Q9HCM4 733 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 WDR70Q9NW82 654 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 GPATCH2LQ9NWQ4 482 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.28■□□□□ 0.2
COL18A1-205ENST00000423214 ATP8A1Q9Y2Q0 1164 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 ZNF462Q96JM2 2506 aa16.28■□□□□ 0.2
COL18A1-205ENST00000423214 CFAP46Q8IYW2 2715 aa16.27■□□□□ 0.2
COL18A1-205ENST00000423214 A0A1W2PNU3 283 aaPredicted RBP16.27■□□□□ 0.2
COL18A1-205ENST00000423214 CAPN8A6NHC0 703 aa16.27■□□□□ 0.2
COL18A1-205ENST00000423214 EEF2KO00418 725 aaKnown RBP16.27■□□□□ 0.2
COL18A1-205ENST00000423214 DAPK3O43293 454 aa16.27■□□□□ 0.2
COL18A1-205ENST00000423214 PRAMEF11O60813 436 aa16.27■□□□□ 0.2
COL18A1-205ENST00000423214 PSMA2P25787 234 aa16.27■□□□□ 0.2
COL18A1-205ENST00000423214 MLLT3P42568 568 aaPredicted RBP16.27■□□□□ 0.2
COL18A1-205ENST00000423214 VAC14Q08AM6 782 aa16.27■□□□□ 0.2
COL18A1-205ENST00000423214 MTM1Q13496 603 aa16.27■□□□□ 0.2
COL18A1-205ENST00000423214 INPP5AQ14642 412 aa16.27■□□□□ 0.2
COL18A1-205ENST00000423214 NCAPHQ15003 741 aa16.27■□□□□ 0.2
COL18A1-205ENST00000423214 PPP1R15BQ5SWA1 713 aa16.27■□□□□ 0.2
COL18A1-205ENST00000423214 ACAD10Q6JQN1 1059 aa16.27■□□□□ 0.2
COL18A1-205ENST00000423214 PPP1R2P3Q6NXS1 205 aa16.27■□□□□ 0.2
COL18A1-205ENST00000423214 LVRNQ6Q4G3 990 aa16.27■□□□□ 0.2
COL18A1-205ENST00000423214 ZNF605Q86T29 641 aa16.27■□□□□ 0.2
COL18A1-205ENST00000423214 MCOLN2Q8IZK6 566 aa16.27■□□□□ 0.2
COL18A1-205ENST00000423214 SDR16C5Q8N3Y7 309 aa16.27■□□□□ 0.2
COL18A1-205ENST00000423214 ZNF843Q8N446 348 aa16.27■□□□□ 0.2
COL18A1-205ENST00000423214 AOPEPQ8N6M6 819 aa16.27■□□□□ 0.2
COL18A1-205ENST00000423214 PDXPQ96GD0 296 aa16.27■□□□□ 0.2
COL18A1-205ENST00000423214 WDR92Q96MX6 357 aa16.27■□□□□ 0.2
COL18A1-205ENST00000423214 GFM1Q96RP9 751 aaKnown RBP16.27■□□□□ 0.2
COL18A1-205ENST00000423214 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.27■□□□□ 0.2
COL18A1-205ENST00000423214 CINPQ9BW66 212 aaPredicted RBP16.27■□□□□ 0.2
COL18A1-205ENST00000423214 DHX35Q9H5Z1 703 aaKnown RBP16.27■□□□□ 0.2
COL18A1-205ENST00000423214 LRRC19Q9H756 370 aa16.27■□□□□ 0.2
COL18A1-205ENST00000423214 GPR34Q9UPC5 381 aa16.27■□□□□ 0.2
COL18A1-205ENST00000423214 OR1A2Q9Y585 309 aa16.27■□□□□ 0.2
COL18A1-205ENST00000423214 CDRT15L2A8MXV6 281 aa16.26■□□□□ 0.19
COL18A1-205ENST00000423214 EIF3CLB5ME19 914 aaKnown RBP16.26■□□□□ 0.19
COL18A1-205ENST00000423214 J3KR12 359 aa16.26■□□□□ 0.19
COL18A1-205ENST00000423214 PALMO75781 387 aa16.26■□□□□ 0.19
COL18A1-205ENST00000423214 TNFSF15O95150 251 aa16.26■□□□□ 0.19
COL18A1-205ENST00000423214 PRKCGP05129 697 aa16.26■□□□□ 0.19
COL18A1-205ENST00000423214 ELFN1P0C7U0 828 aa16.26■□□□□ 0.19
COL18A1-205ENST00000423214 LIG3P49916 1009 aa16.26■□□□□ 0.19
COL18A1-205ENST00000423214 PDX1P52945 283 aa16.26■□□□□ 0.19
COL18A1-205ENST00000423214 SRP54P61011 504 aaKnown RBP16.26■□□□□ 0.19
COL18A1-205ENST00000423214 ANO6Q4KMQ2 910 aa16.26■□□□□ 0.19
COL18A1-205ENST00000423214 CAVIN1Q6NZI2 390 aaKnown RBP16.26■□□□□ 0.19
COL18A1-205ENST00000423214 CAMK1DQ8IU85 385 aa16.26■□□□□ 0.19
COL18A1-205ENST00000423214 LIN37Q96GY3 246 aaPredicted RBP16.26■□□□□ 0.19
COL18A1-205ENST00000423214 EIF3CQ99613 913 aaKnown RBP16.26■□□□□ 0.19
COL18A1-205ENST00000423214 STRADBQ9C0K7 418 aa16.26■□□□□ 0.19
COL18A1-205ENST00000423214 HSD3B7Q9H2F3 369 aa16.26■□□□□ 0.19
COL18A1-205ENST00000423214 AHCTF1Q8WYP5 2266 aa16.26■□□□□ 0.19
COL18A1-205ENST00000423214 PMS2P1A4D2B8 440 aa16.25■□□□□ 0.19
COL18A1-205ENST00000423214 D6RAR5 112 aa16.25■□□□□ 0.19
COL18A1-205ENST00000423214 DFFAO00273 331 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms