RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 SOWAHCQ53LP3 525 aaPredicted RBP22.08■■□□□ 1.13
TRAF4-204ENST00000422344 CCDC157Q569K6 752 aa22.08■■□□□ 1.13
TRAF4-204ENST00000422344 ODF2Q5BJF6 829 aa22.08■■□□□ 1.13
TRAF4-204ENST00000422344 MARC1Q5VT66 337 aa22.08■■□□□ 1.13
TRAF4-204ENST00000422344 MARCH9Q86YJ5 346 aa22.08■■□□□ 1.13
TRAF4-204ENST00000422344 TC2NQ8N9U0 490 aa22.08■■□□□ 1.13
TRAF4-204ENST00000422344 KLF6Q99612 283 aaPredicted RBP22.08■■□□□ 1.13
TRAF4-204ENST00000422344 SCUBE2Q9NQ36 999 aa22.08■■□□□ 1.13
TRAF4-204ENST00000422344 ATP8A1Q9Y2Q0 1164 aa22.08■■□□□ 1.13
TRAF4-204ENST00000422344 SMG1Q96Q15 3661 aaKnown RBP22.08■■□□□ 1.12
TRAF4-204ENST00000422344 RIOK3O14730 519 aaKnown RBP22.07■■□□□ 1.12
TRAF4-204ENST00000422344 MUSKO15146 869 aa22.07■■□□□ 1.12
TRAF4-204ENST00000422344 MFSD11O43934 449 aa22.07■■□□□ 1.12
TRAF4-204ENST00000422344 MTA2O94776 668 aa22.07■■□□□ 1.12
TRAF4-204ENST00000422344 LDOC1O95751 146 aaPredicted RBP22.07■■□□□ 1.12
TRAF4-204ENST00000422344 MMP13P45452 471 aa22.07■■□□□ 1.12
TRAF4-204ENST00000422344 ZNF75DP51815 510 aa22.07■■□□□ 1.12
TRAF4-204ENST00000422344 PDE1CQ14123 709 aaPredicted RBP22.07■■□□□ 1.12
TRAF4-204ENST00000422344 PAFAH1B3Q15102 231 aaKnown RBP22.07■■□□□ 1.12
TRAF4-204ENST00000422344 HS1BP3Q53T59 392 aa22.07■■□□□ 1.12
TRAF4-204ENST00000422344 NCBP2-AS2Q69YL0 99 aa22.07■■□□□ 1.12
TRAF4-204ENST00000422344 SLC22A18ASQ8N1D0 253 aa22.07■■□□□ 1.12
TRAF4-204ENST00000422344 PCDH19Q8TAB3 1148 aa22.07■■□□□ 1.12
TRAF4-204ENST00000422344 IFT43Q96FT9 208 aa22.07■■□□□ 1.12
TRAF4-204ENST00000422344 CNDP2Q96KP4 475 aaKnown RBP22.07■■□□□ 1.12
TRAF4-204ENST00000422344 DNAJC28Q9NX36 388 aa22.07■■□□□ 1.12
TRAF4-204ENST00000422344 LRRD1A4D1F6 860 aa22.06■■□□□ 1.12
TRAF4-204ENST00000422344 PEX11BO96011 259 aa22.06■■□□□ 1.12
TRAF4-204ENST00000422344 MAGEA1P43355 309 aa22.06■■□□□ 1.12
TRAF4-204ENST00000422344 THOP1P52888 689 aa22.06■■□□□ 1.12
TRAF4-204ENST00000422344 TIGD7Q6NT04 549 aaPredicted RBP22.06■■□□□ 1.12
TRAF4-204ENST00000422344 PARGQ86W56 976 aa22.06■■□□□ 1.12
TRAF4-204ENST00000422344 ZSWIM9Q86XI8 627 aa22.06■■□□□ 1.12
TRAF4-204ENST00000422344 MRFAP1L1Q96HT8 127 aa22.06■■□□□ 1.12
TRAF4-204ENST00000422344 NUDCD1Q96RS6 583 aa22.06■■□□□ 1.12
TRAF4-204ENST00000422344 LUC7LQ9NQ29 371 aaKnown RBP22.06■■□□□ 1.12
TRAF4-204ENST00000422344 HAUS2Q9NVX0 235 aa22.06■■□□□ 1.12
TRAF4-204ENST00000422344 A0A1W2PQ67 120 aa22.05■■□□□ 1.12
TRAF4-204ENST00000422344 H3BM21 787 aa22.05■■□□□ 1.12
TRAF4-204ENST00000422344 ENC1O14682 589 aa22.05■■□□□ 1.12
TRAF4-204ENST00000422344 LZTS3O60299 673 aaPredicted RBP22.05■■□□□ 1.12
TRAF4-204ENST00000422344 NEBLO76041 1014 aa22.05■■□□□ 1.12
TRAF4-204ENST00000422344 DKK1O94907 266 aa22.05■■□□□ 1.12
TRAF4-204ENST00000422344 PRKCGP05129 697 aa22.05■■□□□ 1.12
TRAF4-204ENST00000422344 C6P13671 934 aa22.05■■□□□ 1.12
TRAF4-204ENST00000422344 KDELR1P24390 212 aa22.05■■□□□ 1.12
TRAF4-204ENST00000422344 MMP12P39900 470 aa22.05■■□□□ 1.12
TRAF4-204ENST00000422344 GARSP41250 739 aaKnown RBP22.05■■□□□ 1.12
TRAF4-204ENST00000422344 SLC1A1P43005 524 aa22.05■■□□□ 1.12
TRAF4-204ENST00000422344 GALNT2Q10471 571 aa22.05■■□□□ 1.12
TRAF4-204ENST00000422344 SPA17Q15506 151 aa22.05■■□□□ 1.12
TRAF4-204ENST00000422344 IFI16Q16666 785 aaKnown RBP22.05■■□□□ 1.12
TRAF4-204ENST00000422344 RALGPS1Q5JS13 557 aa22.05■■□□□ 1.12
TRAF4-204ENST00000422344 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.05■■□□□ 1.12
TRAF4-204ENST00000422344 PDCD6IPQ8WUM4 868 aaKnown RBP22.05■■□□□ 1.12
TRAF4-204ENST00000422344 CENPTQ96BT3 561 aa22.05■■□□□ 1.12
TRAF4-204ENST00000422344 ECHDC3Q96DC8 303 aa22.05■■□□□ 1.12
TRAF4-204ENST00000422344 ZNF830Q96NB3 372 aaPredicted RBP22.05■■□□□ 1.12
TRAF4-204ENST00000422344 MGME1Q9BQP7 344 aa22.05■■□□□ 1.12
TRAF4-204ENST00000422344 GPR27Q9NS67 375 aa22.05■■□□□ 1.12
TRAF4-204ENST00000422344 ASXL3Q9C0F0 2248 aa22.04■■□□□ 1.12
TRAF4-204ENST00000422344 GCN1Q92616 2671 aaKnown RBP22.04■■□□□ 1.12
TRAF4-204ENST00000422344 COL5A1P20908 1838 aaPredicted RBP22.04■■□□□ 1.12
TRAF4-204ENST00000422344 SPTY2D1-AS1A0A0U1RR47 76 aa22.04■■□□□ 1.12
TRAF4-204ENST00000422344 TTC24A2A3L6 582 aaPredicted RBP22.04■■□□□ 1.12
TRAF4-204ENST00000422344 SOCS5O75159 536 aa22.04■■□□□ 1.12
TRAF4-204ENST00000422344 KRT1P04264 644 aa22.04■■□□□ 1.12
TRAF4-204ENST00000422344 MX2P20592 715 aa22.04■■□□□ 1.12
TRAF4-204ENST00000422344 NFKBIAP25963 317 aa22.04■■□□□ 1.12
TRAF4-204ENST00000422344 CYLC1P35663 651 aaPredicted RBP22.04■■□□□ 1.12
TRAF4-204ENST00000422344 IGFALSP35858 605 aa22.04■■□□□ 1.12
TRAF4-204ENST00000422344 NOP2P46087 812 aaKnown RBP22.04■■□□□ 1.12
TRAF4-204ENST00000422344 LIG3P49916 1009 aa22.04■■□□□ 1.12
TRAF4-204ENST00000422344 PFN3P60673 137 aa22.04■■□□□ 1.12
TRAF4-204ENST00000422344 MAXP61244 160 aa22.04■■□□□ 1.12
TRAF4-204ENST00000422344 HNRNPKP61978 463 aaKnown RBP eCLIP22.04■■□□□ 1.121e-6■■■■□ 24.3
TRAF4-204ENST00000422344 SEMG2Q02383 582 aa22.04■■□□□ 1.12
TRAF4-204ENST00000422344 CYP4F3Q08477 520 aa22.04■■□□□ 1.12
TRAF4-204ENST00000422344 ITKQ08881 620 aa22.04■■□□□ 1.12
TRAF4-204ENST00000422344 PTK2BQ14289 1009 aa22.04■■□□□ 1.12
TRAF4-204ENST00000422344 FZD2Q14332 565 aa22.04■■□□□ 1.12
TRAF4-204ENST00000422344 LRRC14Q15048 493 aa22.04■■□□□ 1.12
TRAF4-204ENST00000422344 ZNF542PQ5EBM4 170 aa22.04■■□□□ 1.12
TRAF4-204ENST00000422344 KANSL1Q7Z3B3 1105 aa22.04■■□□□ 1.12
TRAF4-204ENST00000422344 CCDC170Q8IYT3 715 aa22.04■■□□□ 1.12
TRAF4-204ENST00000422344 GALNT15Q8N3T1 639 aa22.04■■□□□ 1.12
TRAF4-204ENST00000422344 PGBD5Q8N414 524 aa22.04■■□□□ 1.12
TRAF4-204ENST00000422344 RAPGEF5Q92565 580 aa22.04■■□□□ 1.12
TRAF4-204ENST00000422344 FAF2Q96CS3 445 aa22.04■■□□□ 1.12
TRAF4-204ENST00000422344 MAK16Q9BXY0 300 aaKnown RBP22.04■■□□□ 1.12
TRAF4-204ENST00000422344 NT5MQ9NPB1 228 aa22.04■■□□□ 1.12
TRAF4-204ENST00000422344 COQ6Q9Y2Z9 468 aa22.04■■□□□ 1.12
TRAF4-204ENST00000422344 TRABD2BA6NFA1 517 aa22.03■■□□□ 1.12
TRAF4-204ENST00000422344 TRAFD1O14545 582 aaPredicted RBP22.03■■□□□ 1.12
TRAF4-204ENST00000422344 TOR1BO14657 336 aa22.03■■□□□ 1.12
TRAF4-204ENST00000422344 SPOPO43791 374 aa22.03■■□□□ 1.12
TRAF4-204ENST00000422344 PIAS2O75928 621 aa22.03■■□□□ 1.12
TRAF4-204ENST00000422344 MAP3K6O95382 1288 aa22.03■■□□□ 1.12
TRAF4-204ENST00000422344 CPP00450 1065 aa22.03■■□□□ 1.12
TRAF4-204ENST00000422344 TNNT1P13805 278 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms