RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 DHFRP00374 187 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 C9P02748 559 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 TNNI3P19429 210 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 OLR1P78380 273 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 RETSATQ6NUM9 610 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 SLC34A3Q8N130 599 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 CCDC3Q9BQI4 270 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 CXorf21Q9HAI6 301 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.41□□□□□ -0.42
CLCN4-203ENST00000421085 CORO2BQ9UQ03 480 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 TRAFD1O14545 582 aaPredicted RBP12.41□□□□□ -0.42
CLCN4-203ENST00000421085 FESP07332 822 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 IL18Q14116 193 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 OLFML2AQ68BL7 652 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 C12orf56Q8IXR9 622 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 SLC44A1Q8WWI5 657 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 OR52E6Q96RD3 313 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 DNAJC28Q9NX36 388 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 TRAF6Q9Y4K3 522 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 GPC6Q9Y625 555 aaPredicted RBP12.41□□□□□ -0.42
CLCN4-203ENST00000421085 WEE1P30291 646 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 UCMAQ8WVF2 138 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 LPGAT1Q92604 370 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 ZDHHC15Q96MV8 337 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 PHF12Q96QT6 1004 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 PANX1Q96RD7 426 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 LGMNQ99538 433 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 BCL2L14Q9BZR8 327 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 CIPCQ9C0C6 399 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 C8orf4Q9NR00 106 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 STOML2Q9UJZ1 356 aa12.41□□□□□ -0.42
CLCN4-203ENST00000421085 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.41□□□□□ -0.42
CLCN4-203ENST00000421085 ANKDD1BA6NHY2 528 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 SAGE2PA6NJ88 616 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 KPNA5O15131 536 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 PAPSS1O43252 624 aaPredicted RBP12.4□□□□□ -0.42
CLCN4-203ENST00000421085 CABYRO75952 493 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 POMCP01189 267 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 CCNB1P14635 433 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 MTAPQ13126 283 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 THOC7Q6I9Y2 204 aaKnown RBP12.4□□□□□ -0.42
CLCN4-203ENST00000421085 CUZD1Q86UP6 607 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 GALNT15Q8N3T1 639 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 DNAJC1Q96KC8 554 aaKnown RBP12.4□□□□□ -0.42
CLCN4-203ENST00000421085 POLLQ9UGP5 575 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 HACL1Q9UJ83 578 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 ENTPD4Q9Y227 616 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 TRIM17Q9Y577 477 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 WASF2Q9Y6W5 498 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 ACKR2O00590 384 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 AREL1O15033 823 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 INSRRP14616 1297 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 PEX6Q13608 980 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 TIGD2Q4W5G0 525 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 VWA5B1Q5TIE3 1220 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 OR8H1Q8NGG4 311 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 SHC3Q92529 594 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 ITCHQ96J02 903 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 GSDMCQ9BYG8 508 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.4□□□□□ -0.42
CLCN4-203ENST00000421085 FAM149AA5PLN7 773 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 FAM25EA8MYX2 175 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 RGS10O43665 173 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 ZNF12P17014 697 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 ZNF135P52742 658 aaPredicted RBP12.4□□□□□ -0.42
CLCN4-203ENST00000421085 COPZ1P61923 177 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 NOMO3P69849 1222 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 GNA13Q14344 377 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 NFE2Q16621 373 aaPredicted RBP12.4□□□□□ -0.42
CLCN4-203ENST00000421085 AP5B1Q2VPB7 878 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 RNASE12Q5GAN4 147 aaKnown RBP12.4□□□□□ -0.42
CLCN4-203ENST00000421085 SAMD7Q7Z3H4 446 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 FAM220AQ7Z4H9 259 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 BTBD9Q96Q07 612 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 ACSS2Q9NR19 701 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 VPS4AQ9UN37 437 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 CCDC189A1A4V9 331 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 RFXANKO14593 260 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 CCNE2O96020 404 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 GOT1P17174 413 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 BCAP31P51572 246 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 CDH13P55290 713 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 EIF2B5Q13144 721 aaKnown RBP12.4□□□□□ -0.42
CLCN4-203ENST00000421085 RNF44Q7L0R7 432 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 DSG4Q86SJ6 1040 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 GPR180Q86V85 440 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 STX12Q86Y82 276 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 MEIOBQ8N635 442 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 OR2T12Q8NG77 320 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 LRTOMTQ8WZ04 291 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 C7orf26Q96N11 449 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 S100A13Q99584 98 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 SMPD3Q9NY59 655 aaPredicted RBP12.4□□□□□ -0.42
CLCN4-203ENST00000421085 SYNPO2Q9UMS6 1093 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 ADGRB3O60242 1522 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 RPTORQ8N122 1335 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 BCKDKO14874 412 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 PGRMC2O15173 223 aa12.4□□□□□ -0.42
CLCN4-203ENST00000421085 RTN3O95197 1032 aaPredicted RBP12.4□□□□□ -0.42
CLCN4-203ENST00000421085 LRATO95237 230 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms