RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 DRG1Q9Y295 367 aaKnown RBP4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 CDY1Q9Y6F8 540 aa4.05□□□□□ -1.76
HMGB3P20-201ENST00000417997 COL1A2P08123 1366 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 IGKV6D-21A0A0A0MT36 114 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 DENND3A2RUS2 1198 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 H7C4K7 107 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 HNRNPDLO14979 420 aaKnown RBP4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 ZSCAN12O43309 604 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 HBP1O60381 514 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 STX10O60499 249 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 TLR2O60603 784 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 N4BP1O75113 896 aaKnown RBP4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 TOMM70O94826 608 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 AFPP02771 609 aaKnown RBP4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 GYPCP04921 128 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 LGALS2P05162 132 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 IGKV2-30P06310 120 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 CHRM5P08912 532 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 ZNF286BP0CG31 522 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 CYP2A6P11509 494 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 CYP2B6P20813 491 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 SCP2P22307 547 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 CASP14P31944 242 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 GKP32189 559 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 KRT9P35527 623 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 CYLC1P35663 651 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 PSMC2P35998 433 aaKnown RBP4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 NAMPTP43490 491 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 LIG4P49917 911 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 SLC26A2P50443 739 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 SNRPFP62306 86 aaKnown RBP4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 PSG6Q00889 435 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 MYL7Q01449 175 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 ARHGAP1Q07960 439 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 GOLGA8FQ08AF8 430 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 GOLGA8DPQ0D2H9 430 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 CETN1Q12798 172 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 TBX2Q13207 712 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 TFDP1Q14186 410 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 MYBPC2Q14324 1141 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 CNN3Q15417 329 aaKnown RBP4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 NFIL3Q16649 462 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 FAM187BQ17R55 369 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 HSDL1Q3SXM5 330 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 PXDC1Q5TGL8 231 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 CXorf57Q6NSI4 855 aaKnown RBP4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 C11orf87Q6NUJ2 197 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 ZNF720Q7Z2F6 126 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 HAUS6Q7Z4H7 955 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 KCTD20Q7Z5Y7 419 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 ZC3H3Q8IXZ2 948 aaKnown RBP4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 DAW1Q8N136 415 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 C17orf53Q8N3J3 647 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 TC2NQ8N9U0 490 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 KIAA1524Q8TCG1 905 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 ATP8B4Q8TF62 1192 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 PSPC1Q8WXF1 523 aaKnown RBP4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 MAML1Q92585 1016 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 SPSB4Q96A44 273 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 TMEM143Q96AN5 459 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 ZBTB9Q96C00 473 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 ZBTB45Q96K62 511 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 SCLT1Q96NL6 688 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 FYTTD1Q96QD9 318 aaKnown RBP4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 PANX2Q96RD6 677 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 ERGIC2Q96RQ1 377 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 EFHD1Q9BUP0 239 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 KIFC3Q9BVG8 833 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 NAA15Q9BXJ9 866 aaKnown RBP4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 PRSS22Q9GZN4 317 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 SPRTNQ9H040 489 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 C2orf40Q9H1Z8 148 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 ABHD16BQ9H3Z7 469 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 ST6GALNAC4Q9H4F1 302 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 FAM204AQ9H8W3 233 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 AGPAT3Q9NRZ7 376 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 ABHD10Q9NUJ1 306 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 ELOVL5Q9NYP7 299 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 ERAP1Q9NZ08 941 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 ANK1P16157 1881 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 EVPLQ92817 2033 aa4.04□□□□□ -1.76
HMGB3P20-201ENST00000417997 LOC102723971A0A1B0GUV8 181 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 GOLGA6L9A6NEM1 432 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 FAM227AF5H4B4 570 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 PYCARD-AS1I3L0S3 204 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 KIF2AO00139 706 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 PPEF2O14830 753 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 DSCR3O14972 297 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 TGFB1I1O43294 461 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 CA12O43570 354 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 PMPCBO75439 489 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 AKAP3O75969 853 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 RNF8O76064 485 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 STBD1O95210 358 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 SCGB1D2O95969 90 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 S100BP04271 92 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 MMP3P08254 477 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 CCDC175P0C221 793 aa4.03□□□□□ -1.76
HMGB3P20-201ENST00000417997 TRIM49P0CI25 452 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms