RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 EBNA1BP2Q99848 306 aaKnown RBP6.9□□□□□ -1.3
CPS1-202ENST00000417946 FERMT1Q9BQL6 677 aa6.9□□□□□ -1.3
CPS1-202ENST00000417946 FRMD8Q9BZ67 464 aaPredicted RBP6.9□□□□□ -1.3
CPS1-202ENST00000417946 CEP44Q9C0F1 390 aa6.9□□□□□ -1.3
CPS1-202ENST00000417946 TMEM245Q9H330 911 aa6.9□□□□□ -1.3
CPS1-202ENST00000417946 PABPC3Q9H361 631 aaKnown RBP6.9□□□□□ -1.3
CPS1-202ENST00000417946 TRPV5Q9NQA5 729 aa6.9□□□□□ -1.3
CPS1-202ENST00000417946 SMYD2Q9NRG4 433 aa6.9□□□□□ -1.3
CPS1-202ENST00000417946 ARGLU1Q9NWB6 273 aaPredicted RBP6.9□□□□□ -1.3
CPS1-202ENST00000417946 ELOVL2Q9NXB9 296 aa6.9□□□□□ -1.3
CPS1-202ENST00000417946 EURLQ9NYK6 297 aa6.9□□□□□ -1.3
CPS1-202ENST00000417946 DEC1Q9P2X7 70 aa6.9□□□□□ -1.3
CPS1-202ENST00000417946 EVLQ9UI08 416 aaPredicted RBP6.9□□□□□ -1.3
CPS1-202ENST00000417946 FAM50BQ9Y247 325 aa6.9□□□□□ -1.3
CPS1-202ENST00000417946 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.9□□□□□ -1.3
CPS1-202ENST00000417946 PLXNA2O75051 1894 aa6.9□□□□□ -1.31
CPS1-202ENST00000417946 ZCWPW2A0A1B0GU75 182 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 TSPAN11A1L157 253 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 E7EVH7 732 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 SPECC1L-ADORA2AF8WAN1 911 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 K7EQS6 105 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 NDC80O14777 642 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 PSMD3O43242 534 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 SPINT1O43278 529 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 PIGNO95427 931 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 ACSL3O95573 720 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 EPOP01588 193 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 ASLP04424 464 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 SRPRAP08240 638 aaKnown RBP6.89□□□□□ -1.31
CPS1-202ENST00000417946 POLR2EP19388 210 aaKnown RBP6.89□□□□□ -1.31
CPS1-202ENST00000417946 PSMA3P25788 255 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 ARNTP27540 789 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 SSTR1P30872 391 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 KIR2DL1P43626 348 aaPredicted RBP6.89□□□□□ -1.31
CPS1-202ENST00000417946 TNNT3P45378 269 aaPredicted RBP6.89□□□□□ -1.31
CPS1-202ENST00000417946 SCNN1BP51168 640 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 GALK1P51570 392 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 CCNHP51946 323 aaPredicted RBP6.89□□□□□ -1.31
CPS1-202ENST00000417946 METAP1P53582 386 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 GEMIN4P57678 1058 aaKnown RBP6.89□□□□□ -1.31
CPS1-202ENST00000417946 ZP2Q05996 745 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 SULT2A1Q06520 285 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 CDK18Q07002 472 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 GALNT3Q14435 633 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 ZNF234Q14588 700 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 SLMAPQ14BN4 828 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 EIF4HQ15056 248 aaKnown RBP6.89□□□□□ -1.31
CPS1-202ENST00000417946 DLG2Q15700 870 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 SLC1A5Q15758 541 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 CDKN3Q16667 212 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 MYLK3Q32MK0 819 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 MAP9Q49MG5 647 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 C2orf27AQ580R0 203 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 RALGPS1Q5JS13 557 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 EMC10Q5UCC4 262 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 EGFLAMQ63HQ2 1017 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 NAPEPLDQ6IQ20 393 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 TRMT10BQ6PF06 316 aaKnown RBP6.89□□□□□ -1.31
CPS1-202ENST00000417946 PPP1R21Q6ZMI0 780 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 CENPUQ71F23 418 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 CAMK1DQ8IU85 385 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 CCDC117Q8IWD4 279 aaPredicted RBP6.89□□□□□ -1.31
CPS1-202ENST00000417946 PDIK1LQ8N165 341 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 PCDH20Q8N6Y1 951 aaKnown RBP6.89□□□□□ -1.31
CPS1-202ENST00000417946 ATP11CQ8NB49 1132 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 KDM1BQ8NB78 822 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 OR2AP1Q8NGE2 309 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 UHMK1Q8TAS1 419 aaKnown RBP6.89□□□□□ -1.31
CPS1-202ENST00000417946 NSMCE1Q8WV22 266 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 PIH1D2Q8WWB5 315 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 DNASE1L2Q92874 299 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 PTPRN2Q92932 1015 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 ZBTB9Q96C00 473 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 EID2BQ96D98 161 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 STAMBPL1Q96FJ0 436 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 ZNF778Q96MU6 729 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 FCRL3Q96P31 734 aaPredicted RBP6.89□□□□□ -1.31
CPS1-202ENST00000417946 PPP1R2P1Q96PQ5 205 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 SH3GL2Q99962 352 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 DHRS4Q9BTZ2 278 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 KIFC1Q9BW19 673 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 BRD9Q9H8M2 597 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 VIPAS39Q9H9C1 493 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 CD248Q9HCU0 757 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 ZDHHC4Q9NPG8 344 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 SLC2A4RGQ9NR83 387 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 TREX1Q9NSU2 369 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 FAM53CQ9NYF3 392 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 THEGQ9P2T0 379 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 SLC17A6Q9P2U8 582 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 THAP10Q9P2Z0 257 aaPredicted RBP6.89□□□□□ -1.31
CPS1-202ENST00000417946 PRKAG3Q9UGI9 489 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 SOX13Q9UN79 622 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 CHKBQ9Y259 395 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 PLAAQ9Y263 795 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 AAR2Q9Y312 384 aaKnown RBP6.89□□□□□ -1.31
CPS1-202ENST00000417946 KCTD3Q9Y597 815 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 PCDHGC4Q9Y5F7 938 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 RAI2Q9Y5P3 530 aa6.89□□□□□ -1.31
CPS1-202ENST00000417946 A0A0U1RQS6 177 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms