RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 NUDCD1Q96RS6 583 aa15.43■□□□□ 0.06
NUP50-204ENST00000417702 MGME1Q9BQP7 344 aa15.43■□□□□ 0.06
NUP50-204ENST00000417702 TMEM121BQ9BXQ6 578 aaPredicted RBP15.43■□□□□ 0.06
NUP50-204ENST00000417702 UCKL1Q9NWZ5 548 aa15.43■□□□□ 0.06
NUP50-204ENST00000417702 CFAP69A5D8W1 941 aa15.42■□□□□ 0.06
NUP50-204ENST00000417702 TRAFD1O14545 582 aaPredicted RBP15.42■□□□□ 0.06
NUP50-204ENST00000417702 FFAR2O15552 330 aa15.42■□□□□ 0.06
NUP50-204ENST00000417702 SIGLEC6O43699 453 aa15.42■□□□□ 0.06
NUP50-204ENST00000417702 MFSD11O43934 449 aa15.42■□□□□ 0.06
NUP50-204ENST00000417702 CSF2P04141 144 aa15.42■□□□□ 0.06
NUP50-204ENST00000417702 PRKCGP05129 697 aa15.42■□□□□ 0.06
NUP50-204ENST00000417702 NME1P15531 152 aaKnown RBP15.42■□□□□ 0.06
NUP50-204ENST00000417702 JUNDP17535 347 aa15.42■□□□□ 0.06
NUP50-204ENST00000417702 NFKBIAP25963 317 aa15.42■□□□□ 0.06
NUP50-204ENST00000417702 MMP12P39900 470 aa15.42■□□□□ 0.06
NUP50-204ENST00000417702 GARSP41250 739 aaKnown RBP15.42■□□□□ 0.06
NUP50-204ENST00000417702 LIG3P49916 1009 aa15.42■□□□□ 0.06
NUP50-204ENST00000417702 DAB2P98082 770 aa15.42■□□□□ 0.06
NUP50-204ENST00000417702 ILKQ13418 452 aa15.42■□□□□ 0.06
NUP50-204ENST00000417702 PAFAH1B3Q15102 231 aaKnown RBP15.42■□□□□ 0.06
NUP50-204ENST00000417702 IRF4Q15306 451 aa15.42■□□□□ 0.06
NUP50-204ENST00000417702 RALGPS1Q5JS13 557 aa15.42■□□□□ 0.06
NUP50-204ENST00000417702 NCBP2-AS2Q69YL0 99 aa15.42■□□□□ 0.06
NUP50-204ENST00000417702 TIGD7Q6NT04 549 aaPredicted RBP15.42■□□□□ 0.06
NUP50-204ENST00000417702 TP53I13Q8NBR0 393 aaPredicted RBP15.42■□□□□ 0.06
NUP50-204ENST00000417702 OR4C6Q8NH72 309 aa15.42■□□□□ 0.06
NUP50-204ENST00000417702 PCDH19Q8TAB3 1148 aa15.42■□□□□ 0.06
NUP50-204ENST00000417702 RFFLQ8WZ73 363 aa15.42■□□□□ 0.06
NUP50-204ENST00000417702 MBNL1Q9NR56 388 aaKnown RBP15.42■□□□□ 0.06
NUP50-204ENST00000417702 HAUS2Q9NVX0 235 aa15.42■□□□□ 0.06
NUP50-204ENST00000417702 INTUQ9ULD6 942 aa15.42■□□□□ 0.06
NUP50-204ENST00000417702 COQ6Q9Y2Z9 468 aa15.42■□□□□ 0.06
NUP50-204ENST00000417702 COL5A1P20908 1838 aaPredicted RBP15.42■□□□□ 0.06
NUP50-204ENST00000417702 TTC24A2A3L6 582 aaPredicted RBP15.41■□□□□ 0.06
NUP50-204ENST00000417702 TRIM38O00635 465 aa15.41■□□□□ 0.06
NUP50-204ENST00000417702 SCAMP1O15126 338 aa15.41■□□□□ 0.06
NUP50-204ENST00000417702 SOCS5O75159 536 aa15.41■□□□□ 0.06
NUP50-204ENST00000417702 NEBLO76041 1014 aa15.41■□□□□ 0.06
NUP50-204ENST00000417702 MTA2O94776 668 aa15.41■□□□□ 0.06
NUP50-204ENST00000417702 ELFN1P0C7U0 828 aa15.41■□□□□ 0.06
NUP50-204ENST00000417702 CR2P20023 1033 aa15.41■□□□□ 0.06
NUP50-204ENST00000417702 MX2P20592 715 aa15.41■□□□□ 0.06
NUP50-204ENST00000417702 ACADVLP49748 655 aa15.41■□□□□ 0.06
NUP50-204ENST00000417702 SEMG2Q02383 582 aa15.41■□□□□ 0.06
NUP50-204ENST00000417702 GALNT2Q10471 571 aa15.41■□□□□ 0.06
NUP50-204ENST00000417702 SMAD1Q15797 465 aaKnown RBP15.41■□□□□ 0.06
NUP50-204ENST00000417702 IFI16Q16666 785 aaKnown RBP15.41■□□□□ 0.06
NUP50-204ENST00000417702 WSCD2Q2TBF2 565 aa15.41■□□□□ 0.06
NUP50-204ENST00000417702 PROX2Q3B8N5 592 aa15.41■□□□□ 0.06
NUP50-204ENST00000417702 ODF2Q5BJF6 829 aa15.41■□□□□ 0.06
NUP50-204ENST00000417702 KDM7AQ6ZMT4 941 aa15.41■□□□□ 0.06
NUP50-204ENST00000417702 DPPA4Q7L190 304 aa15.41■□□□□ 0.06
NUP50-204ENST00000417702 TMPRSS12Q86WS5 348 aa15.41■□□□□ 0.06
NUP50-204ENST00000417702 PGBD5Q8N414 524 aa15.41■□□□□ 0.06
NUP50-204ENST00000417702 KDF1Q8NAX2 398 aaPredicted RBP15.41■□□□□ 0.06
NUP50-204ENST00000417702 PDCD6IPQ8WUM4 868 aaKnown RBP15.41■□□□□ 0.06
NUP50-204ENST00000417702 BTN2A2Q8WVV5 523 aa15.41■□□□□ 0.06
NUP50-204ENST00000417702 FAF2Q96CS3 445 aa15.41■□□□□ 0.06
NUP50-204ENST00000417702 ZNF830Q96NB3 372 aaPredicted RBP15.41■□□□□ 0.06
NUP50-204ENST00000417702 DUSP23Q9BVJ7 150 aa15.41■□□□□ 0.06
NUP50-204ENST00000417702 NOD2Q9HC29 1040 aa15.41■□□□□ 0.06
NUP50-204ENST00000417702 NT5MQ9NPB1 228 aa15.41■□□□□ 0.06
NUP50-204ENST00000417702 EVA1BQ9NVM1 165 aa15.41■□□□□ 0.06
NUP50-204ENST00000417702 NLGN3Q9NZ94 848 aa15.41■□□□□ 0.06
NUP50-204ENST00000417702 PCDHGC4Q9Y5F7 938 aa15.41■□□□□ 0.06
NUP50-204ENST00000417702 LRRD1A4D1F6 860 aa15.4■□□□□ 0.06
NUP50-204ENST00000417702 HTRA2O43464 458 aaPredicted RBP15.4■□□□□ 0.06
NUP50-204ENST00000417702 KDELR1P24390 212 aa15.4■□□□□ 0.06
NUP50-204ENST00000417702 HTR1BP28222 390 aa15.4■□□□□ 0.06
NUP50-204ENST00000417702 SLC1A1P43005 524 aa15.4■□□□□ 0.06
NUP50-204ENST00000417702 PEX5P50542 639 aa15.4■□□□□ 0.06
NUP50-204ENST00000417702 MAXP61244 160 aa15.4■□□□□ 0.06
NUP50-204ENST00000417702 ITKQ08881 620 aa15.4■□□□□ 0.06
NUP50-204ENST00000417702 EIF2B5Q13144 721 aaKnown RBP15.4■□□□□ 0.06
NUP50-204ENST00000417702 AGERQ15109 404 aa15.4■□□□□ 0.06
NUP50-204ENST00000417702 TPRG1LQ5T0D9 272 aa15.4■□□□□ 0.06
NUP50-204ENST00000417702 MACC1Q6ZN28 852 aa15.4■□□□□ 0.06
NUP50-204ENST00000417702 TEX26Q8N6G2 289 aa15.4■□□□□ 0.06
NUP50-204ENST00000417702 TC2NQ8N9U0 490 aa15.4■□□□□ 0.06
NUP50-204ENST00000417702 ZNF548Q8NEK5 533 aaPredicted RBP15.4■□□□□ 0.06
NUP50-204ENST00000417702 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.4■□□□□ 0.06
NUP50-204ENST00000417702 ZCCHC14Q8WYQ9 949 aaKnown RBP15.4■□□□□ 0.06
NUP50-204ENST00000417702 SPOCK2Q92563 424 aa15.4■□□□□ 0.06
NUP50-204ENST00000417702 RAPGEF5Q92565 580 aa15.4■□□□□ 0.06
NUP50-204ENST00000417702 MAK16Q9BXY0 300 aaKnown RBP15.4■□□□□ 0.06
NUP50-204ENST00000417702 SLC13A1Q9BZW2 595 aa15.4■□□□□ 0.06
NUP50-204ENST00000417702 SPASTQ9UBP0 616 aa15.4■□□□□ 0.06
NUP50-204ENST00000417702 CSNK1G3Q9Y6M4 447 aa15.4■□□□□ 0.06
NUP50-204ENST00000417702 SHROOM3Q8TF72 1996 aa15.39■□□□□ 0.05
NUP50-204ENST00000417702 K7ESM1 405 aa15.39■□□□□ 0.05
NUP50-204ENST00000417702 MATN3O15232 486 aa15.39■□□□□ 0.05
NUP50-204ENST00000417702 AQP9O43315 295 aa15.39■□□□□ 0.05
NUP50-204ENST00000417702 RECQL5O94762 991 aaPredicted RBP15.39■□□□□ 0.05
NUP50-204ENST00000417702 MAP3K6O95382 1288 aa15.39■□□□□ 0.05
NUP50-204ENST00000417702 CPP00450 1065 aa15.39■□□□□ 0.05
NUP50-204ENST00000417702 PCCBP05166 539 aa15.39■□□□□ 0.05
NUP50-204ENST00000417702 KRT10P13645 584 aa15.39■□□□□ 0.05
NUP50-204ENST00000417702 JUPP14923 745 aa15.39■□□□□ 0.05
NUP50-204ENST00000417702 ACP1P24666 158 aa15.39■□□□□ 0.05
NUP50-204ENST00000417702 CCNCP24863 283 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms