RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 DCBLD1Q8N8Z6 715 aa18.01■□□□□ 0.47
CPNE1-210ENST00000416778 FAM71BQ8TC56 605 aa18.01■□□□□ 0.47
CPNE1-210ENST00000416778 LMX1AQ8TE12 382 aa18.01■□□□□ 0.47
CPNE1-210ENST00000416778 BTN2A2Q8WVV5 523 aa18.01■□□□□ 0.47
CPNE1-210ENST00000416778 NUP85Q9BW27 656 aa18.01■□□□□ 0.47
CPNE1-210ENST00000416778 CINPQ9BW66 212 aaPredicted RBP18.01■□□□□ 0.47
CPNE1-210ENST00000416778 NRSN2Q9GZP1 204 aa18.01■□□□□ 0.47
CPNE1-210ENST00000416778 ATP13A3Q9H7F0 1226 aa18.01■□□□□ 0.47
CPNE1-210ENST00000416778 SP110Q9HB58 689 aa18.01■□□□□ 0.47
CPNE1-210ENST00000416778 USP29Q9HBJ7 922 aa18.01■□□□□ 0.47
CPNE1-210ENST00000416778 SALL4Q9UJQ4 1053 aa18.01■□□□□ 0.47
CPNE1-210ENST00000416778 CLCA2Q9UQC9 943 aa18.01■□□□□ 0.47
CPNE1-210ENST00000416778 TTC24A2A3L6 582 aaPredicted RBP18■□□□□ 0.47
CPNE1-210ENST00000416778 TMEM110-MUSTN1A8MSY1 372 aa18■□□□□ 0.47
CPNE1-210ENST00000416778 H3BM21 787 aa18■□□□□ 0.47
CPNE1-210ENST00000416778 MYO1FO00160 1098 aa18■□□□□ 0.47
CPNE1-210ENST00000416778 OPA1O60313 960 aa18■□□□□ 0.47
CPNE1-210ENST00000416778 MAFKO60675 156 aa18■□□□□ 0.47
CPNE1-210ENST00000416778 MT-CO3P00414 261 aa18■□□□□ 0.47
CPNE1-210ENST00000416778 C6P13671 934 aa18■□□□□ 0.47
CPNE1-210ENST00000416778 SERPINA4P29622 427 aa18■□□□□ 0.47
CPNE1-210ENST00000416778 MMP12P39900 470 aa18■□□□□ 0.47
CPNE1-210ENST00000416778 RENBPP51606 427 aa18■□□□□ 0.47
CPNE1-210ENST00000416778 POLR2LP62875 67 aaKnown RBP18■□□□□ 0.47
CPNE1-210ENST00000416778 BCL2L1Q07817 233 aa18■□□□□ 0.47
CPNE1-210ENST00000416778 INPP5AQ14642 412 aa18■□□□□ 0.47
CPNE1-210ENST00000416778 RTP5Q14D33 572 aa18■□□□□ 0.47
CPNE1-210ENST00000416778 IRF4Q15306 451 aa18■□□□□ 0.47
CPNE1-210ENST00000416778 CDCP2Q5VXM1 449 aa18■□□□□ 0.47
CPNE1-210ENST00000416778 ERAP2Q6P179 960 aa18■□□□□ 0.47
CPNE1-210ENST00000416778 C19orf48Q6RUI8 117 aa18■□□□□ 0.47
CPNE1-210ENST00000416778 XPO4Q9C0E2 1151 aaKnown RBP18■□□□□ 0.47
CPNE1-210ENST00000416778 PCDH18Q9HCL0 1135 aa18■□□□□ 0.47
CPNE1-210ENST00000416778 STAU2Q9NUL3 570 aaKnown RBP eCLIP18■□□□□ 0.47
CPNE1-210ENST00000416778 SPASTQ9UBP0 616 aa18■□□□□ 0.47
CPNE1-210ENST00000416778 SEPT3Q9UH03 358 aa18■□□□□ 0.47
CPNE1-210ENST00000416778 ANAPC7Q9UJX3 599 aa18■□□□□ 0.47
CPNE1-210ENST00000416778 ATP8A1Q9Y2Q0 1164 aa18■□□□□ 0.47
CPNE1-210ENST00000416778 GP1BAP07359 652 aa17.99■□□□□ 0.47
CPNE1-210ENST00000416778 CR2P20023 1033 aa17.99■□□□□ 0.47
CPNE1-210ENST00000416778 PTMSP20962 102 aa17.99■□□□□ 0.47
CPNE1-210ENST00000416778 DUSP3P51452 185 aaPredicted RBP17.99■□□□□ 0.47
CPNE1-210ENST00000416778 ARSEP51690 589 aa17.99■□□□□ 0.47
CPNE1-210ENST00000416778 ADKP55263 362 aaKnown RBP17.99■□□□□ 0.47
CPNE1-210ENST00000416778 C1orf61Q13536 156 aa17.99■□□□□ 0.47
CPNE1-210ENST00000416778 DEFB133Q30KQ1 61 aa17.99■□□□□ 0.47
CPNE1-210ENST00000416778 CFAP58Q5T655 872 aa17.99■□□□□ 0.47
CPNE1-210ENST00000416778 FAXCQ5TGI0 409 aa17.99■□□□□ 0.47
CPNE1-210ENST00000416778 TMCO4Q5TGY1 634 aa17.99■□□□□ 0.47
CPNE1-210ENST00000416778 ZCCHC8Q6NZY4 707 aaKnown RBP17.99■□□□□ 0.47
CPNE1-210ENST00000416778 TMCO3Q6UWJ1 677 aa17.99■□□□□ 0.47
CPNE1-210ENST00000416778 LIPIQ6XZB0 460 aa17.99■□□□□ 0.47
CPNE1-210ENST00000416778 MACC1Q6ZN28 852 aa17.99■□□□□ 0.47
CPNE1-210ENST00000416778 PHACTR4Q8IZ21 702 aa17.99■□□□□ 0.47
CPNE1-210ENST00000416778 RBFAQ8N0V3 343 aa17.99■□□□□ 0.47
CPNE1-210ENST00000416778 PGBD5Q8N414 524 aa17.99■□□□□ 0.47
CPNE1-210ENST00000416778 SPOCK2Q92563 424 aa17.99■□□□□ 0.47
CPNE1-210ENST00000416778 TBATAQ96M53 351 aa17.99■□□□□ 0.47
CPNE1-210ENST00000416778 APOOQ9BUR5 198 aa17.99■□□□□ 0.47
CPNE1-210ENST00000416778 CLPBQ9H078 707 aa17.99■□□□□ 0.47
CPNE1-210ENST00000416778 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.99■□□□□ 0.476e-6■□□□□ 9.8
CPNE1-210ENST00000416778 LMO7DNF2Z398 122 aa17.98■□□□□ 0.47
CPNE1-210ENST00000416778 YY2O15391 372 aa17.98■□□□□ 0.47
CPNE1-210ENST00000416778 LZTS3O60299 673 aaPredicted RBP17.98■□□□□ 0.47
CPNE1-210ENST00000416778 AP1S1P61966 158 aa17.98■□□□□ 0.47
CPNE1-210ENST00000416778 PPARDQ03181 441 aa17.98■□□□□ 0.47
CPNE1-210ENST00000416778 RALGDSQ12967 914 aa17.98■□□□□ 0.47
CPNE1-210ENST00000416778 ASTE1Q2TB18 679 aaPredicted RBP17.98■□□□□ 0.47
CPNE1-210ENST00000416778 SKOR2Q2VWA4 1001 aaPredicted RBP17.98■□□□□ 0.47
CPNE1-210ENST00000416778 ATP13A4Q4VNC1 1196 aa17.98■□□□□ 0.47
CPNE1-210ENST00000416778 PRRT3Q5FWE3 981 aa17.98■□□□□ 0.47
CPNE1-210ENST00000416778 CBARPQ8N350 705 aaPredicted RBP17.98■□□□□ 0.47
CPNE1-210ENST00000416778 HNRNPLLQ8WVV9 542 aaKnown RBP17.98■□□□□ 0.47
CPNE1-210ENST00000416778 IL12RB2Q99665 862 aa17.98■□□□□ 0.47
CPNE1-210ENST00000416778 BOCQ9BWV1 1114 aa17.98■□□□□ 0.47
CPNE1-210ENST00000416778 LHX6Q9UPM6 363 aa17.98■□□□□ 0.47
CPNE1-210ENST00000416778 PCDHGC4Q9Y5F7 938 aa17.98■□□□□ 0.47
CPNE1-210ENST00000416778 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.97■□□□□ 0.47
CPNE1-210ENST00000416778 EME2A4GXA9 379 aaPredicted RBP17.97■□□□□ 0.47
CPNE1-210ENST00000416778 HTRA2O43464 458 aaPredicted RBP17.97■□□□□ 0.47
CPNE1-210ENST00000416778 CD48P09326 243 aa17.97■□□□□ 0.47
CPNE1-210ENST00000416778 TSHRP16473 764 aa17.97■□□□□ 0.47
CPNE1-210ENST00000416778 GM2AP17900 193 aa17.97■□□□□ 0.47
CPNE1-210ENST00000416778 MMRN1Q13201 1228 aa17.97■□□□□ 0.47
CPNE1-210ENST00000416778 NYAP1Q6ZVC0 841 aa17.97■□□□□ 0.47
CPNE1-210ENST00000416778 CPNE8Q86YQ8 564 aa17.97■□□□□ 0.47
CPNE1-210ENST00000416778 PLA2G15Q8NCC3 412 aa17.97■□□□□ 0.47
CPNE1-210ENST00000416778 OR8K1Q8NGG5 319 aa17.97■□□□□ 0.47
CPNE1-210ENST00000416778 TSACCQ96A04 125 aaPredicted RBP17.97■□□□□ 0.47
CPNE1-210ENST00000416778 NUDCD1Q96RS6 583 aa17.97■□□□□ 0.47
CPNE1-210ENST00000416778 LRRC61Q9BV99 259 aa17.97■□□□□ 0.47
CPNE1-210ENST00000416778 SLC13A1Q9BZW2 595 aa17.97■□□□□ 0.47
CPNE1-210ENST00000416778 NOD2Q9HC29 1040 aa17.97■□□□□ 0.47
CPNE1-210ENST00000416778 NCKIPSDQ9NZQ3 722 aa17.97■□□□□ 0.47
CPNE1-210ENST00000416778 APOBEC3BQ9UH17 382 aaKnown RBP17.97■□□□□ 0.47
CPNE1-210ENST00000416778 OR1A2Q9Y585 309 aa17.97■□□□□ 0.47
CPNE1-210ENST00000416778 AK5Q9Y6K8 562 aa17.97■□□□□ 0.47
CPNE1-210ENST00000416778 A0A087WV48 116 aa17.96■□□□□ 0.47
CPNE1-210ENST00000416778 CPED1A4D0V7 1026 aa17.96■□□□□ 0.47
CPNE1-210ENST00000416778 A8MX80 341 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms