RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 TOR1BO14657 336 aa20.69■□□□□ 0.9
PTPRU-203ENST00000415600 SIGLEC6O43699 453 aa20.69■□□□□ 0.9
PTPRU-203ENST00000415600 FTLP02792 175 aaPredicted RBP20.69■□□□□ 0.9
PTPRU-203ENST00000415600 GKP32189 559 aa20.69■□□□□ 0.9
PTPRU-203ENST00000415600 THOP1P52888 689 aa20.69■□□□□ 0.9
PTPRU-203ENST00000415600 HADHBP55084 474 aaKnown RBP20.69■□□□□ 0.9
PTPRU-203ENST00000415600 CKAP4Q07065 602 aaKnown RBP20.69■□□□□ 0.9
PTPRU-203ENST00000415600 PROX2Q3B8N5 592 aa20.69■□□□□ 0.9
PTPRU-203ENST00000415600 HES3Q5TGS1 186 aa20.69■□□□□ 0.9
PTPRU-203ENST00000415600 SLC25A45Q8N413 288 aa20.69■□□□□ 0.9
PTPRU-203ENST00000415600 THAP2Q9H0W7 228 aa20.69■□□□□ 0.9
PTPRU-203ENST00000415600 PLXNB3Q9ULL4 1909 aa20.69■□□□□ 0.9
PTPRU-203ENST00000415600 SPTY2D1-AS1A0A0U1RR47 76 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 CTAGE15A4D2H0 777 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 TM7SF2O76062 418 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 CTAGE8P0CG41 777 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 ABL2P42684 1182 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 CYP4F3Q08477 520 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 CTAGE6Q86UF2 777 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 CTAGE4Q8IX94 777 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 RHOT2Q8IXI1 618 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 SYCE1Q8N0S2 351 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 SLC22A18ASQ8N1D0 253 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 CACTIN-AS1Q8N1I8 211 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 SLC35G2Q8TBE7 412 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 BTN2A2Q8WVV5 523 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 BMFQ96LC9 184 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 OSBPL9Q96SU4 736 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 NOL6Q9H6R4 1146 aaKnown RBP20.68■□□□□ 0.9
PTPRU-203ENST00000415600 CNOT8Q9UFF9 292 aaKnown RBP20.68■□□□□ 0.9
PTPRU-203ENST00000415600 LHX6Q9UPM6 363 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 DOCK9Q9BZ29 2069 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 TAF4O00268 1085 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 TRIM38O00635 465 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 SCAMP1O15126 338 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 FFAR2O15552 330 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 CSF2P04141 144 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 NME1P15531 152 aaKnown RBP20.68■□□□□ 0.9
PTPRU-203ENST00000415600 CAMK2BQ13554 666 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 PDE1CQ14123 709 aaPredicted RBP20.68■□□□□ 0.9
PTPRU-203ENST00000415600 ERAP2Q6P179 960 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 ZNF653Q96CK0 615 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 ZNF641Q96N77 438 aaPredicted RBP20.68■□□□□ 0.9
PTPRU-203ENST00000415600 GPR27Q9NS67 375 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 CSNK1G3Q9Y6M4 447 aa20.68■□□□□ 0.9
PTPRU-203ENST00000415600 SPEGQ15772 3267 aa20.67■□□□□ 0.9
PTPRU-203ENST00000415600 ZFHX4Q86UP3 3567 aa20.67■□□□□ 0.9
PTPRU-203ENST00000415600 POM121BA6NF01 834 aa20.67■□□□□ 0.9
PTPRU-203ENST00000415600 TMEM191CA6NGB0 347 aa20.67■□□□□ 0.9
PTPRU-203ENST00000415600 AREL1O15033 823 aa20.67■□□□□ 0.9
PTPRU-203ENST00000415600 ZZEF1O43149 2961 aa20.67■□□□□ 0.9
PTPRU-203ENST00000415600 FTCDO95954 541 aa20.67■□□□□ 0.9
PTPRU-203ENST00000415600 YPEL5P62699 121 aa20.67■□□□□ 0.9
PTPRU-203ENST00000415600 FGL2Q14314 439 aa20.67■□□□□ 0.9
PTPRU-203ENST00000415600 BRAT1Q6PJG6 821 aa20.67■□□□□ 0.9
PTPRU-203ENST00000415600 PAF1Q8N7H5 531 aa20.67■□□□□ 0.9
PTPRU-203ENST00000415600 TUBGCP5Q96RT8 1024 aa20.67■□□□□ 0.9
PTPRU-203ENST00000415600 ZWILCHQ9H900 591 aa20.67■□□□□ 0.9
PTPRU-203ENST00000415600 PCSK1NQ9UHG2 260 aa20.67■□□□□ 0.9
PTPRU-203ENST00000415600 CLCA2Q9UQC9 943 aa20.67■□□□□ 0.9
PTPRU-203ENST00000415600 ARID1BQ8NFD5 2236 aaPredicted RBP20.67■□□□□ 0.9
PTPRU-203ENST00000415600 DMXL2Q8TDJ6 3036 aa20.66■□□□□ 0.9
PTPRU-203ENST00000415600 CKMT1AP12532 417 aa20.66■□□□□ 0.9
PTPRU-203ENST00000415600 OGDHQ02218 1023 aa20.66■□□□□ 0.9
PTPRU-203ENST00000415600 FZD2Q14332 565 aa20.66■□□□□ 0.9
PTPRU-203ENST00000415600 RFTN1Q14699 578 aaPredicted RBP20.66■□□□□ 0.9
PTPRU-203ENST00000415600 ACAP1Q15027 740 aa20.66■□□□□ 0.9
PTPRU-203ENST00000415600 TEX35Q5T0J7 233 aa20.66■□□□□ 0.9
PTPRU-203ENST00000415600 RFX8Q6ZV50 586 aa20.66■□□□□ 0.9
PTPRU-203ENST00000415600 CREG2Q8IUH2 290 aa20.66■□□□□ 0.9
PTPRU-203ENST00000415600 LZTR1Q8N653 840 aa20.66■□□□□ 0.9
PTPRU-203ENST00000415600 GLMNQ92990 594 aa20.66■□□□□ 0.9
PTPRU-203ENST00000415600 NRSN2Q9GZP1 204 aa20.66■□□□□ 0.9
PTPRU-203ENST00000415600 LRRC19Q9H756 370 aa20.66■□□□□ 0.9
PTPRU-203ENST00000415600 SP110Q9HB58 689 aa20.66■□□□□ 0.9
PTPRU-203ENST00000415600 UCKL1Q9NWZ5 548 aa20.66■□□□□ 0.9
PTPRU-203ENST00000415600 ITM2BQ9Y287 266 aa20.66■□□□□ 0.9
PTPRU-203ENST00000415600 RAXQ9Y2V3 346 aa20.66■□□□□ 0.9
PTPRU-203ENST00000415600 AK5Q9Y6K8 562 aa20.66■□□□□ 0.9
PTPRU-203ENST00000415600 RAD51BO15315 384 aa20.65■□□□□ 0.9
PTPRU-203ENST00000415600 ATMINO43313 823 aaPredicted RBP20.65■□□□□ 0.9
PTPRU-203ENST00000415600 PRAMEF11O60813 436 aa20.65■□□□□ 0.9
PTPRU-203ENST00000415600 MTA2O94776 668 aa20.65■□□□□ 0.9
PTPRU-203ENST00000415600 GP1BAP07359 652 aa20.65■□□□□ 0.9
PTPRU-203ENST00000415600 TARDBPQ13148 414 aaKnown RBP eCLIP20.65■□□□□ 0.9
PTPRU-203ENST00000415600 PPP6R3Q5H9R7 873 aaPredicted RBP20.65■□□□□ 0.9
PTPRU-203ENST00000415600 ZCCHC8Q6NZY4 707 aaKnown RBP20.65■□□□□ 0.9
PTPRU-203ENST00000415600 ZNF572Q7Z3I7 529 aaPredicted RBP20.65■□□□□ 0.9
PTPRU-203ENST00000415600 MARCH9Q86YJ5 346 aa20.65■□□□□ 0.9
PTPRU-203ENST00000415600 FAM181AQ8N9Y4 354 aa20.65■□□□□ 0.9
PTPRU-203ENST00000415600 CAPZA3Q96KX2 299 aa20.65■□□□□ 0.9
PTPRU-203ENST00000415600 KLF6Q99612 283 aaPredicted RBP20.65■□□□□ 0.9
PTPRU-203ENST00000415600 ABCG4Q9H172 646 aa20.65■□□□□ 0.9
PTPRU-203ENST00000415600 SUV39H2Q9H5I1 410 aa20.65■□□□□ 0.9
PTPRU-203ENST00000415600 ATP13A3Q9H7F0 1226 aa20.65■□□□□ 0.9
PTPRU-203ENST00000415600 SCUBE2Q9NQ36 999 aa20.65■□□□□ 0.9
PTPRU-203ENST00000415600 SPASTQ9UBP0 616 aa20.65■□□□□ 0.9
PTPRU-203ENST00000415600 GPSM3Q9Y4H4 160 aa20.65■□□□□ 0.9
PTPRU-203ENST00000415600 WDFY3Q8IZQ1 3526 aa20.65■□□□□ 0.9
PTPRU-203ENST00000415600 FREM2Q5SZK8 3169 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms