RNA–Protein interactions for RNA: ENST00000415188.1

USP4-203, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3 BASIC

Gene USP4, Length 1,454 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-203ENST00000415188 SNUPNO95149 360 aaKnown RBP14.94□□□□□ -0.02
USP4-203ENST00000415188 OAZ2O95190 189 aa14.94□□□□□ -0.02
USP4-203ENST00000415188 C2P06681 752 aa14.94□□□□□ -0.02
USP4-203ENST00000415188 PAMP19021 973 aa14.94□□□□□ -0.02
USP4-203ENST00000415188 GRIK1P39086 918 aa14.94□□□□□ -0.02
USP4-203ENST00000415188 MAGEA11P43364 429 aa14.94□□□□□ -0.02
USP4-203ENST00000415188 CLCN5P51795 746 aa14.94□□□□□ -0.02
USP4-203ENST00000415188 ALDH18A1P54886 795 aaKnown RBP14.94□□□□□ -0.02
USP4-203ENST00000415188 ASPHQ12797 758 aa14.94□□□□□ -0.02
USP4-203ENST00000415188 OLIG2Q13516 323 aa14.94□□□□□ -0.02
USP4-203ENST00000415188 TRMT5Q32P41 509 aaKnown RBP14.94□□□□□ -0.02
USP4-203ENST00000415188 METTL21CQ5VZV1 264 aa14.94□□□□□ -0.02
USP4-203ENST00000415188 SLC8B1Q6J4K2 584 aa14.94□□□□□ -0.02
USP4-203ENST00000415188 PARM1Q6UWI2 310 aa14.94□□□□□ -0.02
USP4-203ENST00000415188 SCD5Q86SK9 330 aa14.94□□□□□ -0.02
USP4-203ENST00000415188 MON1AQ86VX9 555 aa14.94□□□□□ -0.02
USP4-203ENST00000415188 ZC3HC1Q86WB0 502 aaKnown RBP14.94□□□□□ -0.02
USP4-203ENST00000415188 SCAMP5Q8TAC9 235 aa14.94□□□□□ -0.02
USP4-203ENST00000415188 ATOH1Q92858 354 aaPredicted RBP14.94□□□□□ -0.02
USP4-203ENST00000415188 FCRL2Q96LA5 508 aaPredicted RBP14.94□□□□□ -0.02
USP4-203ENST00000415188 TMEM209Q96SK2 561 aa14.94□□□□□ -0.02
USP4-203ENST00000415188 AGAP2Q99490 1192 aa14.94□□□□□ -0.02
USP4-203ENST00000415188 FAM167BQ9BTA0 163 aa14.94□□□□□ -0.02
USP4-203ENST00000415188 SIK2Q9H0K1 926 aa14.94□□□□□ -0.02
USP4-203ENST00000415188 FBXO44Q9H4M3 255 aa14.94□□□□□ -0.02
USP4-203ENST00000415188 NMRAL1Q9HBL8 299 aa14.94□□□□□ -0.02
USP4-203ENST00000415188 CHRAC1Q9NRG0 131 aa14.94□□□□□ -0.02
USP4-203ENST00000415188 DNMT3BQ9UBC3 853 aaKnown RBP14.94□□□□□ -0.02
USP4-203ENST00000415188 TLK1Q9UKI8 766 aa14.94□□□□□ -0.02
USP4-203ENST00000415188 CDH7Q9ULB5 785 aa14.94□□□□□ -0.02
USP4-203ENST00000415188 CA14Q9ULX7 337 aa14.94□□□□□ -0.02
USP4-203ENST00000415188 PLA2G4CQ9UP65 541 aa14.94□□□□□ -0.02
USP4-203ENST00000415188 NYNRINQ9P2P1 1898 aaKnown RBP14.93□□□□□ -0.02
USP4-203ENST00000415188 G3V2L1 256 aa14.93□□□□□ -0.02
USP4-203ENST00000415188 SYN3O14994 580 aa14.93□□□□□ -0.02
USP4-203ENST00000415188 ENTPD5O75356 428 aa14.93□□□□□ -0.02
USP4-203ENST00000415188 HSPA4LO95757 839 aa14.93□□□□□ -0.02
USP4-203ENST00000415188 SRFP11831 508 aa14.93□□□□□ -0.02
USP4-203ENST00000415188 NMBRP28336 390 aa14.93□□□□□ -0.02
USP4-203ENST00000415188 ADRA1AP35348 466 aa14.93□□□□□ -0.02
USP4-203ENST00000415188 KPNA2P52292 529 aaKnown RBP14.93□□□□□ -0.02
USP4-203ENST00000415188 NDST2P52849 883 aa14.93□□□□□ -0.02
USP4-203ENST00000415188 MTA1Q13330 715 aa14.93□□□□□ -0.02
USP4-203ENST00000415188 ITGA9Q13797 1035 aa14.93□□□□□ -0.02
USP4-203ENST00000415188 MRPL58Q14197 206 aaKnown RBP14.93□□□□□ -0.02
USP4-203ENST00000415188 TSNAXIP1Q2TAA8 658 aa14.93□□□□□ -0.02
USP4-203ENST00000415188 FSCBQ5H9T9 825 aa14.93□□□□□ -0.02
USP4-203ENST00000415188 KIAA0930Q6ICG6 404 aaPredicted RBP14.93□□□□□ -0.02
USP4-203ENST00000415188 RFWD3Q6PCD5 774 aa14.93□□□□□ -0.02
USP4-203ENST00000415188 ZYG11AQ6WRX3 759 aa14.93□□□□□ -0.02
USP4-203ENST00000415188 TTC8Q8TAM2 541 aa14.93□□□□□ -0.02
USP4-203ENST00000415188 GPR152Q8TDT2 470 aa14.93□□□□□ -0.02
USP4-203ENST00000415188 N4BP2L2Q92802 583 aaPredicted RBP14.93□□□□□ -0.02
USP4-203ENST00000415188 FGF13Q92913 245 aa14.93□□□□□ -0.02
USP4-203ENST00000415188 FGF14Q92915 247 aa14.93□□□□□ -0.02
USP4-203ENST00000415188 STMN2Q93045 179 aa14.93□□□□□ -0.02
USP4-203ENST00000415188 NXPE3Q969Y0 559 aa14.93□□□□□ -0.02
USP4-203ENST00000415188 MYCBPQ99417 103 aaPredicted RBP14.93□□□□□ -0.02
USP4-203ENST00000415188 APOL2Q9BQE5 337 aa14.93□□□□□ -0.02
USP4-203ENST00000415188 SLC39A8Q9C0K1 460 aa14.93□□□□□ -0.02
USP4-203ENST00000415188 CDH19Q9H159 772 aa14.93□□□□□ -0.02
USP4-203ENST00000415188 IL1RAPL1Q9NZN1 696 aa14.93□□□□□ -0.02
USP4-203ENST00000415188 WNT16Q9UBV4 365 aa14.93□□□□□ -0.02
USP4-203ENST00000415188 TLR6Q9Y2C9 796 aa14.93□□□□□ -0.02
USP4-203ENST00000415188 TCAF1Q9Y4C2 921 aa14.93□□□□□ -0.02
USP4-203ENST00000415188 PRR5-ARHGAP8B1AHC4 643 aa14.92□□□□□ -0.02
USP4-203ENST00000415188 E9PAM4 449 aa14.92□□□□□ -0.02
USP4-203ENST00000415188 LIN7AO14910 233 aaPredicted RBP14.92□□□□□ -0.02
USP4-203ENST00000415188 NEBLO76041 1014 aa14.92□□□□□ -0.02
USP4-203ENST00000415188 ABLIM3O94929 683 aa14.92□□□□□ -0.02
USP4-203ENST00000415188 PSMG1O95456 288 aa14.92□□□□□ -0.02
USP4-203ENST00000415188 POU2F2P09086 479 aa14.92□□□□□ -0.02
USP4-203ENST00000415188 CRABP2P29373 138 aa14.92□□□□□ -0.02
USP4-203ENST00000415188 IDH3AP50213 366 aa14.92□□□□□ -0.02
USP4-203ENST00000415188 TUBP50607 506 aa14.92□□□□□ -0.02
USP4-203ENST00000415188 NUBP1P53384 320 aa14.92□□□□□ -0.02
USP4-203ENST00000415188 MLLT6P55198 1093 aaPredicted RBP14.92□□□□□ -0.02
USP4-203ENST00000415188 ARHGAP8P85298 464 aa14.92□□□□□ -0.02
USP4-203ENST00000415188 SLC12A1Q13621 1099 aa14.92□□□□□ -0.02
USP4-203ENST00000415188 RCN2Q14257 317 aa14.92□□□□□ -0.02
USP4-203ENST00000415188 CTXN3Q4LDR2 81 aa14.92□□□□□ -0.02
USP4-203ENST00000415188 PABPC1LQ4VXU2 614 aaKnown RBP14.92□□□□□ -0.02
USP4-203ENST00000415188 ARTNQ5T4W7 220 aa14.92□□□□□ -0.02
USP4-203ENST00000415188 KIAA0408Q6ZU52 694 aa14.92□□□□□ -0.02
USP4-203ENST00000415188 SCUBE1Q8IWY4 988 aa14.92□□□□□ -0.02
USP4-203ENST00000415188 NUP93Q8N1F7 819 aa14.92□□□□□ -0.02
USP4-203ENST00000415188 PLD6Q8N2A8 252 aaKnown RBP14.92□□□□□ -0.02
USP4-203ENST00000415188 UMODL1-AS1Q8N2C9 162 aa14.92□□□□□ -0.02
USP4-203ENST00000415188 RBM15BQ8NDT2 890 aaKnown RBP14.92□□□□□ -0.02
USP4-203ENST00000415188 ZNF461Q8TAF7 563 aa14.92□□□□□ -0.02
USP4-203ENST00000415188 ING5Q8WYH8 240 aa14.92□□□□□ -0.02
USP4-203ENST00000415188 EBF4Q9BQW3 602 aa14.92□□□□□ -0.02
USP4-203ENST00000415188 FICDQ9BVA6 458 aa14.92□□□□□ -0.02
USP4-203ENST00000415188 GPAMQ9HCL2 828 aa14.92□□□□□ -0.02
USP4-203ENST00000415188 OXSMQ9NWU1 459 aa14.92□□□□□ -0.02
USP4-203ENST00000415188 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.92□□□□□ -0.02
USP4-203ENST00000415188 DOCK4Q8N1I0 1966 aa14.92□□□□□ -0.02
USP4-203ENST00000415188 NOTCH4Q99466 2003 aa14.91□□□□□ -0.02
USP4-203ENST00000415188 A0A1W2PQH9 124 aa14.91□□□□□ -0.02
USP4-203ENST00000415188 SLCO1B7G3V0H7 640 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms