RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 ZNF112Q9UJU3 913 aa3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 ZCCHC11Q5TAX3 1644 aaKnown RBP3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 SOS1Q07889 1333 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P23-201ENST00000414981 ANKRD26Q9UPS8 1709 aa3.9□□□□□ -1.78
HMGB3P23-201ENST00000414981 CD109Q6YHK3 1445 aa3.9□□□□□ -1.78
HMGB3P23-201ENST00000414981 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 SYNDIG1LA6NDD5 238 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 NPIPB13A6NJU9 1138 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 OR6C75A6NL08 312 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 NPIPB5A8MRT5 1133 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 NPIPB4C9JG80 1138 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 EYA2O00167 538 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 SEPT4O43236 478 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 SLC28A2O43868 658 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 NEMFO60524 1076 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 PLOD3O60568 738 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 MBD4O95243 580 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 TFRCP02786 760 aaKnown RBP3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 CYP1A2P05177 515 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 NGFRP08138 427 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 CYP21A2P08686 494 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 MYZAPP0CAP1 466 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 ZNF853P0CG23 659 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 MX1P20591 662 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 PRKCHP24723 683 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 CST5P28325 142 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 CASQ1P31415 396 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 SSR1P43307 286 aaKnown RBP3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 MAPK9P45984 424 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 RPS6KA3P51812 740 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 ZP1P60852 638 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 UBE2HP62256 183 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 ZXDBP98169 803 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 G3BP1Q13283 466 aaKnown RBP eCLIP3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 TRIM14Q14142 442 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 DUSP6Q16828 381 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 FAM171A1Q5VUB5 890 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 DCAF12L2Q5VW00 463 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 LIN54Q6MZP7 749 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 CYP26C1Q6V0L0 522 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 CCDC73Q6ZRK6 1079 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 CTU1Q7Z7A3 348 aaKnown RBP3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 CCDC25Q86WR0 208 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 ZDHHC23Q8IYP9 409 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 FBXL14Q8N1E6 418 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 DPP10Q8N608 796 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 ANKRD44Q8N8A2 993 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 KIAA1524Q8TCG1 905 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 GPT2Q8TD30 523 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 HDAC7Q8WUI4 952 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 ZNF419Q96HQ0 510 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 ZNF479Q96JC4 524 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 FRG2BQ96QU4 278 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 IWS1Q96ST2 819 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 MEIS3Q99687 375 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 KRCC1Q9NPI7 259 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 GIMAP2Q9UG22 337 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 RCE1Q9Y256 329 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 LRP12Q9Y561 859 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 CDK12Q9NYV4 1490 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 QRICH2Q9H0J4 1663 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 PTPRCP08575 1304 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 CCDC171Q6TFL3 1326 aa3.9□□□□□ -1.79
HMGB3P23-201ENST00000414981 KIAA0232Q92628 1395 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 BECN2A8MW95 431 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 LACTBL1A8MY62 500 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 E7EVH7 732 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 H0Y3Z8 333 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 BOLA2-SMG1P6H3BVE0 249 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 KIF2AO00139 706 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 PES1O00541 588 aaKnown RBP3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 SPRY3O43610 288 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 KIF1CO43896 1103 aaKnown RBP3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 CCNT1O60563 726 aaKnown RBP3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 FAM155BO75949 473 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 FCGR2AP12318 317 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 CPA1P15085 419 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 CHRNB2P17787 502 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 CD151P48509 253 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 CCT5P48643 541 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 HSD17B7P56937 341 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 SELENOVP59797 346 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 EGR4Q05215 589 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 PRKG2Q13237 762 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 PKP1Q13835 747 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 PTPN14Q15678 1187 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 SMAD1Q15797 465 aaKnown RBP3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 PARP10Q53GL7 1025 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 DNTTIP2Q5QJE6 756 aaKnown RBP3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 INTS11Q5TA45 600 aaKnown RBP3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 OTUD1Q5VV17 481 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 CPLX2Q6PUV4 134 aaKnown RBP3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 RRAGAQ7L523 313 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 GALNT7Q86SF2 657 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 SCN4BQ8IWT1 228 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 TEX9Q8N6V9 391 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 FSIP1Q8NA03 581 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 NAXEQ8NCW5 288 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 CMASQ8NFW8 434 aaPredicted RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms