RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 RNF25Q96BH1 459 aaPredicted RBP14.92□□□□□ -0.02
LIMS4-201ENST00000413601 TSGA13Q96PP4 275 aa14.92□□□□□ -0.02
LIMS4-201ENST00000413601 SCNM1Q9BWG6 230 aa14.92□□□□□ -0.02
LIMS4-201ENST00000413601 GOLPH3Q9H4A6 298 aa14.92□□□□□ -0.02
LIMS4-201ENST00000413601 MBNL1Q9NR56 388 aaKnown RBP14.92□□□□□ -0.02
LIMS4-201ENST00000413601 GPR27Q9NS67 375 aa14.92□□□□□ -0.02
LIMS4-201ENST00000413601 APOBEC2Q9Y235 224 aaKnown RBP14.92□□□□□ -0.02
LIMS4-201ENST00000413601 A8MX80 341 aa14.91□□□□□ -0.02
LIMS4-201ENST00000413601 ZNF487B1APH4 448 aa14.91□□□□□ -0.02
LIMS4-201ENST00000413601 MATN3O15232 486 aa14.91□□□□□ -0.02
LIMS4-201ENST00000413601 NDUFA10O95299 355 aa14.91□□□□□ -0.02
LIMS4-201ENST00000413601 C6P13671 934 aa14.91□□□□□ -0.02
LIMS4-201ENST00000413601 RABIFP47224 123 aa14.91□□□□□ -0.02
LIMS4-201ENST00000413601 POLR2LP62875 67 aaKnown RBP14.91□□□□□ -0.02
LIMS4-201ENST00000413601 ITKQ08881 620 aa14.91□□□□□ -0.02
LIMS4-201ENST00000413601 PDE1CQ14123 709 aaPredicted RBP14.91□□□□□ -0.02
LIMS4-201ENST00000413601 FZD2Q14332 565 aa14.91□□□□□ -0.02
LIMS4-201ENST00000413601 ODF2Q5BJF6 829 aa14.91□□□□□ -0.02
LIMS4-201ENST00000413601 TPRG1LQ5T0D9 272 aa14.91□□□□□ -0.02
LIMS4-201ENST00000413601 TIGD7Q6NT04 549 aaPredicted RBP14.91□□□□□ -0.02
LIMS4-201ENST00000413601 CHCHD4Q8N4Q1 142 aa14.91□□□□□ -0.02
LIMS4-201ENST00000413601 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.91□□□□□ -0.02
LIMS4-201ENST00000413601 PLD5Q8N7P1 536 aa14.91□□□□□ -0.02
LIMS4-201ENST00000413601 TP53I13Q8NBR0 393 aaPredicted RBP14.91□□□□□ -0.02
LIMS4-201ENST00000413601 CCNYQ8ND76 341 aa14.91□□□□□ -0.02
LIMS4-201ENST00000413601 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.91□□□□□ -0.02
LIMS4-201ENST00000413601 MAML1Q92585 1016 aa14.91□□□□□ -0.02
LIMS4-201ENST00000413601 CNTNAP3BQ96NU0 1288 aa14.91□□□□□ -0.02
LIMS4-201ENST00000413601 ANP32EQ9BTT0 268 aa14.91□□□□□ -0.02
LIMS4-201ENST00000413601 C1QTNF7Q9BXJ2 289 aa14.91□□□□□ -0.02
LIMS4-201ENST00000413601 MAK16Q9BXY0 300 aaKnown RBP14.91□□□□□ -0.02
LIMS4-201ENST00000413601 CNTNAP3Q9BZ76 1288 aa14.91□□□□□ -0.02
LIMS4-201ENST00000413601 LUC7LQ9NQ29 371 aaKnown RBP14.91□□□□□ -0.02
LIMS4-201ENST00000413601 DNAJC28Q9NX36 388 aa14.91□□□□□ -0.02
LIMS4-201ENST00000413601 TOR4AQ9NXH8 423 aa14.91□□□□□ -0.02
LIMS4-201ENST00000413601 DDX56Q9NY93 547 aaKnown RBP14.91□□□□□ -0.02
LIMS4-201ENST00000413601 DTLQ9NZJ0 730 aa14.91□□□□□ -0.02
LIMS4-201ENST00000413601 FTSJ1Q9UET6 329 aa14.91□□□□□ -0.02
LIMS4-201ENST00000413601 HEY1Q9Y5J3 304 aa14.91□□□□□ -0.02
LIMS4-201ENST00000413601 ALG6Q9Y672 507 aa14.91□□□□□ -0.02
LIMS4-201ENST00000413601 SPTY2D1-AS1A0A0U1RR47 76 aa14.9□□□□□ -0.02
LIMS4-201ENST00000413601 RCCD1A6NED2 376 aa14.9□□□□□ -0.02
LIMS4-201ENST00000413601 HTRA2O43464 458 aaPredicted RBP14.9□□□□□ -0.02
LIMS4-201ENST00000413601 TNFSF14O43557 240 aa14.9□□□□□ -0.02
LIMS4-201ENST00000413601 LZTS3O60299 673 aaPredicted RBP14.9□□□□□ -0.02
LIMS4-201ENST00000413601 TRIM16O95361 564 aa14.9□□□□□ -0.02
LIMS4-201ENST00000413601 CCNB1P14635 433 aa14.9□□□□□ -0.02
LIMS4-201ENST00000413601 PFN3P60673 137 aa14.9□□□□□ -0.02
LIMS4-201ENST00000413601 TRAF2Q12933 501 aa14.9□□□□□ -0.02
LIMS4-201ENST00000413601 RALGDSQ12967 914 aa14.9□□□□□ -0.02
LIMS4-201ENST00000413601 IRF4Q15306 451 aa14.9□□□□□ -0.02
LIMS4-201ENST00000413601 RALGPS1Q5JS13 557 aa14.9□□□□□ -0.02
LIMS4-201ENST00000413601 SLC9A4Q6AI14 798 aa14.9□□□□□ -0.02
LIMS4-201ENST00000413601 RAD9BQ6WBX8 426 aa14.9□□□□□ -0.02
LIMS4-201ENST00000413601 RAB44Q7Z6P3 723 aaPredicted RBP14.9□□□□□ -0.02
LIMS4-201ENST00000413601 VSIG1Q86XK7 387 aa14.9□□□□□ -0.02
LIMS4-201ENST00000413601 RFX6Q8HWS3 928 aa14.9□□□□□ -0.02
LIMS4-201ENST00000413601 SLC25A45Q8N413 288 aa14.9□□□□□ -0.02
LIMS4-201ENST00000413601 SPC24Q8NBT2 197 aa14.9□□□□□ -0.02
LIMS4-201ENST00000413601 LGMNQ99538 433 aa14.9□□□□□ -0.02
LIMS4-201ENST00000413601 SEMA3CQ99985 751 aa14.9□□□□□ -0.02
LIMS4-201ENST00000413601 RBM22Q9NW64 420 aaKnown RBP eCLIP14.9□□□□□ -0.02
LIMS4-201ENST00000413601 UCKL1Q9NWZ5 548 aa14.9□□□□□ -0.02
LIMS4-201ENST00000413601 SALL4Q9UJQ4 1053 aa14.9□□□□□ -0.02
LIMS4-201ENST00000413601 TTLL3Q9Y4R7 772 aa14.9□□□□□ -0.02
LIMS4-201ENST00000413601 MYLKQ15746 1914 aa14.9□□□□□ -0.02
LIMS4-201ENST00000413601 A0A0A6YYK5 440 aaPredicted RBP14.89□□□□□ -0.03
LIMS4-201ENST00000413601 APOL1O14791 398 aa14.89□□□□□ -0.03
LIMS4-201ENST00000413601 SOCS5O75159 536 aa14.89□□□□□ -0.03
LIMS4-201ENST00000413601 PIAS2O75928 621 aa14.89□□□□□ -0.03
LIMS4-201ENST00000413601 NEBLO76041 1014 aa14.89□□□□□ -0.03
LIMS4-201ENST00000413601 LDOC1O95751 146 aaPredicted RBP14.89□□□□□ -0.03
LIMS4-201ENST00000413601 CPP00450 1065 aa14.89□□□□□ -0.03
LIMS4-201ENST00000413601 ELFN1P0C7U0 828 aa14.89□□□□□ -0.03
LIMS4-201ENST00000413601 MX2P20592 715 aa14.89□□□□□ -0.03
LIMS4-201ENST00000413601 DGKAP23743 735 aa14.89□□□□□ -0.03
LIMS4-201ENST00000413601 THOP1P52888 689 aa14.89□□□□□ -0.03
LIMS4-201ENST00000413601 DSC2Q02487 901 aa14.89□□□□□ -0.03
LIMS4-201ENST00000413601 LRRC14Q15048 493 aa14.89□□□□□ -0.03
LIMS4-201ENST00000413601 WSCD2Q2TBF2 565 aa14.89□□□□□ -0.03
LIMS4-201ENST00000413601 CCDC157Q569K6 752 aa14.89□□□□□ -0.03
LIMS4-201ENST00000413601 MFSD7Q6UXD7 560 aa14.89□□□□□ -0.03
LIMS4-201ENST00000413601 NPNTQ6UXI9 565 aa14.89□□□□□ -0.03
LIMS4-201ENST00000413601 LIPIQ6XZB0 460 aa14.89□□□□□ -0.03
LIMS4-201ENST00000413601 DPPA4Q7L190 304 aa14.89□□□□□ -0.03
LIMS4-201ENST00000413601 CCDC13Q8IYE1 715 aa14.89□□□□□ -0.03
LIMS4-201ENST00000413601 ADAMTS14Q8WXS8 1223 aa14.89□□□□□ -0.03
LIMS4-201ENST00000413601 FATE1Q969F0 183 aa14.89□□□□□ -0.03
LIMS4-201ENST00000413601 HDAC11Q96DB2 347 aa14.89□□□□□ -0.03
LIMS4-201ENST00000413601 IFT43Q96FT9 208 aa14.89□□□□□ -0.03
LIMS4-201ENST00000413601 CNDP2Q96KP4 475 aaKnown RBP14.89□□□□□ -0.03
LIMS4-201ENST00000413601 ZNF830Q96NB3 372 aaPredicted RBP14.89□□□□□ -0.03
LIMS4-201ENST00000413601 POLR1EQ9GZS1 481 aaKnown RBP14.89□□□□□ -0.03
LIMS4-201ENST00000413601 B4GALT6Q9UBX8 382 aa14.89□□□□□ -0.03
LIMS4-201ENST00000413601 KLF15Q9UIH9 416 aa14.89□□□□□ -0.03
LIMS4-201ENST00000413601 KLK13Q9UKR3 277 aa14.89□□□□□ -0.03
LIMS4-201ENST00000413601 REXO2Q9Y3B8 237 aaKnown RBP14.89□□□□□ -0.03
LIMS4-201ENST00000413601 DUSP10Q9Y6W6 482 aa14.89□□□□□ -0.03
LIMS4-201ENST00000413601 A0A1W2PQ67 120 aa14.88□□□□□ -0.03
LIMS4-201ENST00000413601 ENC1O14682 589 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms