RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 PAK1Q13153 545 aa9.65□□□□□ -0.86
RFFL-203ENST00000413582 SERINC3Q13530 473 aa9.65□□□□□ -0.86
RFFL-203ENST00000413582 POLD3Q15054 466 aaPredicted RBP9.65□□□□□ -0.86
RFFL-203ENST00000413582 WSCD2Q2TBF2 565 aa9.65□□□□□ -0.86
RFFL-203ENST00000413582 ATXN7L2Q5T6C5 722 aaPredicted RBP9.65□□□□□ -0.86
RFFL-203ENST00000413582 PHF19Q5T6S3 580 aa9.65□□□□□ -0.86
RFFL-203ENST00000413582 TRNP1Q6NT89 227 aa9.65□□□□□ -0.86
RFFL-203ENST00000413582 TRIM65Q6PJ69 517 aa9.65□□□□□ -0.86
RFFL-203ENST00000413582 ENPP7Q6UWV6 458 aa9.65□□□□□ -0.86
RFFL-203ENST00000413582 BNIPLQ7Z465 357 aa9.65□□□□□ -0.86
RFFL-203ENST00000413582 JPH3Q8WXH2 748 aaPredicted RBP9.65□□□□□ -0.86
RFFL-203ENST00000413582 SHC3Q92529 594 aa9.65□□□□□ -0.86
RFFL-203ENST00000413582 PMEPA1Q969W9 287 aa9.65□□□□□ -0.86
RFFL-203ENST00000413582 HAPLN3Q96S86 360 aa9.65□□□□□ -0.86
RFFL-203ENST00000413582 SEMA6CQ9H3T2 930 aa9.65□□□□□ -0.86
RFFL-203ENST00000413582 SYNCQ9H7C4 482 aa9.65□□□□□ -0.86
RFFL-203ENST00000413582 NDFIP2Q9NV92 336 aa9.65□□□□□ -0.86
RFFL-203ENST00000413582 PPARGC1AQ9UBK2 798 aaKnown RBP9.65□□□□□ -0.86
RFFL-203ENST00000413582 KLQ9UEF7 1012 aa9.65□□□□□ -0.86
RFFL-203ENST00000413582 ANAPC2Q9UJX6 822 aa9.65□□□□□ -0.86
RFFL-203ENST00000413582 COQ6Q9Y2Z9 468 aa9.65□□□□□ -0.86
RFFL-203ENST00000413582 OR1A2Q9Y585 309 aa9.65□□□□□ -0.86
RFFL-203ENST00000413582 BICDL2A1A5D9 508 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 POP4O95707 220 aaKnown RBP9.64□□□□□ -0.87
RFFL-203ENST00000413582 F9P00740 461 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 CCL4P13236 92 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 LIFP15018 202 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 HTR1BP28222 390 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 FLT3P36888 993 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 SCNN1AP37088 669 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 ETFBP38117 255 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 USP8P40818 1118 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 ATP1A2P50993 1020 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 STX17P56962 302 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 GEMIN4P57678 1058 aaKnown RBP9.64□□□□□ -0.87
RFFL-203ENST00000413582 RNASE9P60153 205 aaKnown RBP9.64□□□□□ -0.87
RFFL-203ENST00000413582 TPM4P67936 248 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 APBA1Q02410 837 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 HLTFQ14527 1009 aaKnown RBP eCLIP9.64□□□□□ -0.87
RFFL-203ENST00000413582 LRRC14Q15048 493 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 IQCB1Q15051 598 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 ARHGAP44Q17R89 818 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 MYLK3Q32MK0 819 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 SLC25A52Q3SY17 297 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 MAP9Q49MG5 647 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 C14orf28Q4W4Y0 310 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 EFHC2Q5JST6 749 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 MANEALQ5VSG8 457 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 OGFOD3Q6PK18 319 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 GDPD4Q6W3E5 623 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 RD3Q7Z3Z2 195 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 TTC7BQ86TV6 843 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 NLRP14Q86W24 1093 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 ZDHHC17Q8IUH5 632 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 FAM26EQ8N5C1 309 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 OR1E3Q8WZA6 343 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 NKD1Q969G9 470 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 WDR92Q96MX6 357 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 RBSNQ9H1K0 784 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 CBX8Q9HC52 389 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 DKK3Q9UBP4 350 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 RWDD2AQ9UIY3 292 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 NEU3Q9UQ49 428 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.64□□□□□ -0.87
RFFL-203ENST00000413582 DGKBQ9Y6T7 804 aa9.64□□□□□ -0.87
RFFL-203ENST00000413582 ITPR2Q14571 2701 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 BLACEA4D250 179 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 B4DGG1 531 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 GOLGA6L19H0YKK7 550 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 HGSO14964 777 aaPredicted RBP9.63□□□□□ -0.87
RFFL-203ENST00000413582 NUDT21O43809 227 aaKnown RBP9.63□□□□□ -0.87
RFFL-203ENST00000413582 TMCC1O94876 653 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 TIMP2P16035 220 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 CCR10P46092 362 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 MAPKAPK2P49137 400 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 SNX16P57768 344 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 KIAA1024LP59773 190 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 B4GALNT1Q00973 533 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 MYL5Q02045 173 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 INPP5AQ14642 412 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 TMEM52BQ4KMG9 183 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 TMEM164Q5U3C3 297 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 LEKR1Q6ZMV7 388 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 FAM131BQ86XD5 332 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 ATL2Q8NHH9 583 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 FAM81BQ96LP2 452 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 GDAP1L1Q96MZ0 367 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 NUDT22Q9BRQ3 303 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 CRACR2AQ9BSW2 395 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 APOOQ9BUR5 198 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 GRPEL1Q9HAV7 217 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 RDH14Q9HBH5 336 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 FGF22Q9HCT0 170 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 PLCB1Q9NQ66 1216 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 TMEM51Q9NW97 253 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 LRIT1Q9P2V4 623 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 APEX2Q9UBZ4 518 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 AJAP1Q9UKB5 411 aaPredicted RBP9.63□□□□□ -0.87
RFFL-203ENST00000413582 PCDHGA3Q9Y5H0 932 aa9.63□□□□□ -0.87
RFFL-203ENST00000413582 CACNA1DQ01668 2161 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms