RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 TOP3BO95985 862 aaKnown RBP4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 ETFAP13804 333 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 SELLP14151 372 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 TMEM11P17152 192 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 EPHB2P29323 1055 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 MPGP29372 298 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 TNFSF8P32971 234 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 CXCR3P49682 368 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 CFHR1Q03591 330 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 CDC16Q13042 620 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 PSMD6Q15008 389 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 NTRK2Q16620 822 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 SMTNL2Q2TAL5 461 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 PLEKHO1Q53GL0 409 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 ESCO2Q56NI9 601 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 MEX3CQ5U5Q3 659 aaKnown RBP4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 KIAA1614Q5VZ46 1190 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 HIST2H2BCQ6DN03 193 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 HIST2H2BDQ6DRA6 164 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 JADE1Q6IE81 842 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 KDELC2Q7Z4H8 507 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 Q8N1X5 172 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 PARP16Q8N5Y8 322 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 BOLLQ8N9W6 283 aaKnown RBP4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 MCPH1Q8NEM0 835 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 SEMA6DQ8NFY4 1073 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 CEP76Q8TAP6 659 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 SLC22A18Q96BI1 424 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 TUBB6Q9BUF5 446 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 C1QTNF5Q9BXJ0 243 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 CDT1Q9H211 546 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 NDST4Q9H3R1 872 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 PLK3Q9H4B4 646 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 SLC28A3Q9HAS3 691 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 SPAG4Q9NPE6 437 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 CCDC177Q9NQR7 707 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 CPSF2Q9P2I0 782 aaKnown RBP4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 ZNHIT2Q9UHR6 403 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 ZHX1Q9UKY1 873 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 ZNF711Q9Y462 761 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 SLC4A4Q9Y6R1 1079 aa4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 ZNF335Q9H4Z2 1342 aaPredicted RBP4.94□□□□□ -1.62
HMGB3P31-201ENST00000413333 LINC01548A6NM66 108 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 H3BQ06 376 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 TP73O15350 636 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 SRPRAP08240 638 aaKnown RBP4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 LMAN1P49257 510 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 HSD17B4P51659 736 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 PMS2P54278 862 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 RPS13P62277 151 aaKnown RBP4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 UBXN2AP68543 259 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 ZNF91Q05481 1191 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 FHL2Q14192 279 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 SOWAHAQ2M3V2 549 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 ZXDCQ2QGD7 858 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 CEP78Q5JTW2 689 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 C6orf10Q5SRN2 563 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 GARNL3Q5VVW2 1013 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 ZNF66Q6ZN08 573 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 QSOX2Q6ZRP7 698 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 DNAAF5Q86Y56 855 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 CNGA4Q8IV77 575 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 ZBTB2Q8N680 514 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 AVL9Q8NBF6 648 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 APPL2Q8NEU8 664 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 OR14L1PQ8NHC6 308 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 HUS1BQ8NHY5 278 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 FBXL8Q96CD0 374 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 ZNF570Q96NI8 536 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 ABHD1Q96SE0 405 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 B3GNT4Q9C0J1 378 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 PDZD7Q9H5P4 517 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 THSD1Q9NS62 852 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 RNF146Q9NTX7 359 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 GIMAP4Q9NUV9 329 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 SETD4Q9NVD3 440 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 TAB2Q9NYJ8 693 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 MORF4L1Q9UBU8 362 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 CEPT1Q9Y6K0 416 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 MAU2Q9Y6X3 613 aa4.93□□□□□ -1.62
HMGB3P31-201ENST00000413333 TRBV5-3A0A0A0MS03 114 aa4.92□□□□□ -1.62
HMGB3P31-201ENST00000413333 B8ZZF3 427 aa4.92□□□□□ -1.62
HMGB3P31-201ENST00000413333 STMND1H3BQB6 276 aa4.92□□□□□ -1.62
HMGB3P31-201ENST00000413333 H7C0S8 307 aa4.92□□□□□ -1.62
HMGB3P31-201ENST00000413333 HCRTR2O43614 444 aa4.92□□□□□ -1.62
HMGB3P31-201ENST00000413333 KLK8O60259 260 aa4.92□□□□□ -1.62
HMGB3P31-201ENST00000413333 MTA2O94776 668 aa4.92□□□□□ -1.62
HMGB3P31-201ENST00000413333 CLDN7O95471 211 aa4.92□□□□□ -1.62
HMGB3P31-201ENST00000413333 CBSLP0DN79 551 aa4.92□□□□□ -1.62
HMGB3P31-201ENST00000413333 CHRNB1P11230 501 aa4.92□□□□□ -1.62
HMGB3P31-201ENST00000413333 CBSP35520 551 aa4.92□□□□□ -1.62
HMGB3P31-201ENST00000413333 ARHGAP25P42331 645 aa4.92□□□□□ -1.62
HMGB3P31-201ENST00000413333 TERF1P54274 439 aa4.92□□□□□ -1.62
HMGB3P31-201ENST00000413333 ACSM2AQ08AH3 577 aa4.92□□□□□ -1.62
HMGB3P31-201ENST00000413333 AIMP1Q12904 312 aaKnown RBP4.92□□□□□ -1.62
HMGB3P31-201ENST00000413333 NAE1Q13564 534 aa4.92□□□□□ -1.62
HMGB3P31-201ENST00000413333 LPIN1Q14693 890 aa4.92□□□□□ -1.62
HMGB3P31-201ENST00000413333 PCLAFQ15004 111 aa4.92□□□□□ -1.62
HMGB3P31-201ENST00000413333 ALDH1L2Q3SY69 923 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms