RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 FIS1Q9Y3D6 152 aa17.74■□□□□ 0.43
SDCBP-202ENST00000413219 NEMP2A6NFY4 417 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 DLGAP1O14490 977 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 MYL3P08590 195 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 ZNF286BP0CG31 522 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 CCNCP24863 283 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 STT3AP46977 705 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 ATP6V0D1P61421 351 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 CDC42EP1Q00587 391 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 BNIP2Q12982 314 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 POU6F1Q14863 301 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 SPATS1Q496A3 300 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 XKR4Q5GH76 650 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 BTBD8Q5XKL5 378 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 LARP4Q71RC2 724 aaKnown RBP eCLIP17.73■□□□□ 0.43
SDCBP-202ENST00000413219 TRPM4Q8TD43 1214 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 DOK1Q99704 481 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 C9orf16Q9BUW7 83 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 ADI1Q9BV57 179 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 COLEC11Q9BWP8 271 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 NXF3Q9H4D5 531 aaKnown RBP17.73■□□□□ 0.43
SDCBP-202ENST00000413219 TXNRD2Q9NNW7 524 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 TNFRSF12AQ9NP84 129 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 CD320Q9NPF0 282 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 CNGB3Q9NQW8 809 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 SMOXQ9NWM0 555 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 DDIT4Q9NX09 232 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 TRAF6Q9Y4K3 522 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 YJEFN3A6XGL0 299 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 CBFA2T3O75081 653 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 LTA4HP09960 611 aaKnown RBP17.73■□□□□ 0.43
SDCBP-202ENST00000413219 HSD17B1P14061 328 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 HMOX2P30519 316 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 ENTPD1P49961 510 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 GEMP55040 296 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 PLOD1Q02809 727 aaPredicted RBP17.73■□□□□ 0.43
SDCBP-202ENST00000413219 MERTKQ12866 999 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 CSHL1Q14406 222 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 ZNF470Q6ECI4 717 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 PM20D1Q6GTS8 502 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 DCLRE1AQ6PJP8 1040 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 ZNF786Q8N393 782 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 SHCBP1Q8NEM2 672 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 FEM1CQ96JP0 617 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 PRKD2Q9BZL6 878 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 MROH8Q9H579 483 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 GLOD4Q9HC38 313 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 ENTPD7Q9NQZ7 604 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 AGPAT4Q9NRZ5 378 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 RBPJLQ9UBG7 517 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 OR12D3Q9UGF7 316 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 EBF1Q9UH73 591 aa17.73■□□□□ 0.43
SDCBP-202ENST00000413219 HEMK1Q9Y5R4 338 aaPredicted RBP17.73■□□□□ 0.43
SDCBP-202ENST00000413219 PDCD11Q14690 1871 aaKnown RBP17.72■□□□□ 0.43
SDCBP-202ENST00000413219 MCM3APO60318 1980 aa17.72■□□□□ 0.43
SDCBP-202ENST00000413219 H3BRB1 525 aa17.72■□□□□ 0.43
SDCBP-202ENST00000413219 MAGEB3O15480 346 aa17.72■□□□□ 0.43
SDCBP-202ENST00000413219 LRIG2O94898 1065 aa17.72■□□□□ 0.43
SDCBP-202ENST00000413219 IL10P22301 178 aa17.72■□□□□ 0.43
SDCBP-202ENST00000413219 KCNA5P22460 613 aa17.72■□□□□ 0.43
SDCBP-202ENST00000413219 CXCR3P49682 368 aa17.72■□□□□ 0.43
SDCBP-202ENST00000413219 CLCN5P51795 746 aa17.72■□□□□ 0.43
SDCBP-202ENST00000413219 PRAMEP78395 509 aa17.72■□□□□ 0.43
SDCBP-202ENST00000413219 SLC14A2Q15849 920 aa17.72■□□□□ 0.43
SDCBP-202ENST00000413219 SLC36A3Q495N2 470 aa17.72■□□□□ 0.43
SDCBP-202ENST00000413219 TBCELQ5QJ74 424 aa17.72■□□□□ 0.43
SDCBP-202ENST00000413219 GJC2Q5T442 439 aaPredicted RBP17.72■□□□□ 0.43
SDCBP-202ENST00000413219 LCN8Q6JVE9 175 aa17.72■□□□□ 0.43
SDCBP-202ENST00000413219 CBR4Q8N4T8 237 aa17.72■□□□□ 0.43
SDCBP-202ENST00000413219 SPATA22Q8NHS9 363 aa17.72■□□□□ 0.43
SDCBP-202ENST00000413219 TSPAN17Q96FV3 270 aa17.72■□□□□ 0.43
SDCBP-202ENST00000413219 MED10Q9BTT4 135 aa17.72■□□□□ 0.43
SDCBP-202ENST00000413219 FICDQ9BVA6 458 aa17.72■□□□□ 0.43
SDCBP-202ENST00000413219 UNKQ9C0B0 810 aaKnown RBP17.72■□□□□ 0.43
SDCBP-202ENST00000413219 TUT1Q9H6E5 874 aaKnown RBP17.72■□□□□ 0.43
SDCBP-202ENST00000413219 CYP4F12Q9HCS2 524 aa17.72■□□□□ 0.43
SDCBP-202ENST00000413219 CHST12Q9NRB3 414 aa17.72■□□□□ 0.43
SDCBP-202ENST00000413219 ARHGEF38Q9NXL2 777 aa17.72■□□□□ 0.43
SDCBP-202ENST00000413219 SH3GLB1Q9Y371 365 aa17.72■□□□□ 0.43
SDCBP-202ENST00000413219 NDUFAF1Q9Y375 327 aa17.72■□□□□ 0.43
SDCBP-202ENST00000413219 CSADQ9Y600 493 aa17.72■□□□□ 0.43
SDCBP-202ENST00000413219 DHRS12A0PJE2 317 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 SAC3D1A6NKF1 404 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 GPX3P22352 226 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 ADRA1AP35348 466 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 MAP3K7CLP57077 242 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 C16orf72Q14CZ0 275 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 ACAP2Q15057 778 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 ATP6AP1Q15904 470 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 Q3C1V9 767 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 TAPT1Q6NXT6 567 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 ELMSAN1Q6PJG2 1045 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 LAYNQ6UX15 382 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 FUNDC1Q8IVP5 155 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 IPMKQ8NFU5 416 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 GABPB2Q8TAK5 448 aaPredicted RBP17.71■□□□□ 0.43
SDCBP-202ENST00000413219 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.71■□□□□ 0.43
SDCBP-202ENST00000413219 VPS50Q96JG6 964 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 IL12RB2Q99665 862 aa17.71■□□□□ 0.43
SDCBP-202ENST00000413219 NPLQ9BXD5 320 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms