RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 RCCD1A6NED2 376 aa18.97■□□□□ 0.63
TRIM56-202ENST00000412507 MATN3O15232 486 aa18.97■□□□□ 0.63
TRIM56-202ENST00000412507 SDC3O75056 442 aa18.97■□□□□ 0.63
TRIM56-202ENST00000412507 FTH1P19P0C7X4 201 aa18.97■□□□□ 0.63
TRIM56-202ENST00000412507 CDC25BP30305 580 aa18.97■□□□□ 0.63
TRIM56-202ENST00000412507 POLR2LP62875 67 aaKnown RBP18.97■□□□□ 0.63
TRIM56-202ENST00000412507 ITKQ08881 620 aa18.97■□□□□ 0.63
TRIM56-202ENST00000412507 INAVAQ3KP66 663 aa18.97■□□□□ 0.63
TRIM56-202ENST00000412507 SLC9A4Q6AI14 798 aa18.97■□□□□ 0.63
TRIM56-202ENST00000412507 MFSD7Q6UXD7 560 aa18.97■□□□□ 0.63
TRIM56-202ENST00000412507 VSIG1Q86XK7 387 aa18.97■□□□□ 0.63
TRIM56-202ENST00000412507 RFX6Q8HWS3 928 aa18.97■□□□□ 0.63
TRIM56-202ENST00000412507 TP53I13Q8NBR0 393 aaPredicted RBP18.97■□□□□ 0.63
TRIM56-202ENST00000412507 CCNYQ8ND76 341 aa18.97■□□□□ 0.63
TRIM56-202ENST00000412507 PDCD6IPQ8WUM4 868 aaKnown RBP18.97■□□□□ 0.63
TRIM56-202ENST00000412507 MAML1Q92585 1016 aa18.97■□□□□ 0.63
TRIM56-202ENST00000412507 CENPTQ96BT3 561 aa18.97■□□□□ 0.63
TRIM56-202ENST00000412507 CDC6Q99741 560 aa18.97■□□□□ 0.63
TRIM56-202ENST00000412507 MAK16Q9BXY0 300 aaKnown RBP18.97■□□□□ 0.63
TRIM56-202ENST00000412507 SALL4Q9UJQ4 1053 aa18.97■□□□□ 0.63
TRIM56-202ENST00000412507 ANGPTL2Q9UKU9 493 aa18.97■□□□□ 0.63
TRIM56-202ENST00000412507 REXO2Q9Y3B8 237 aaKnown RBP18.97■□□□□ 0.63
TRIM56-202ENST00000412507 HEY1Q9Y5J3 304 aa18.97■□□□□ 0.63
TRIM56-202ENST00000412507 ACACBO00763 2458 aa18.96■□□□□ 0.63
TRIM56-202ENST00000412507 APOL1O14791 398 aa18.96■□□□□ 0.63
TRIM56-202ENST00000412507 HTRA2O43464 458 aaPredicted RBP18.96■□□□□ 0.63
TRIM56-202ENST00000412507 SOCS5O75159 536 aa18.96■□□□□ 0.63
TRIM56-202ENST00000412507 IPO7O95373 1038 aaKnown RBP18.96■□□□□ 0.63
TRIM56-202ENST00000412507 C6P13671 934 aa18.96■□□□□ 0.63
TRIM56-202ENST00000412507 MX2P20592 715 aa18.96■□□□□ 0.63
TRIM56-202ENST00000412507 IGFALSP35858 605 aa18.96■□□□□ 0.63
TRIM56-202ENST00000412507 RABIFP47224 123 aa18.96■□□□□ 0.63
TRIM56-202ENST00000412507 LIG3P49916 1009 aa18.96■□□□□ 0.63
TRIM56-202ENST00000412507 TRAF2Q12933 501 aa18.96■□□□□ 0.63
TRIM56-202ENST00000412507 PDE1CQ14123 709 aaPredicted RBP18.96■□□□□ 0.63
TRIM56-202ENST00000412507 RALGPS1Q5JS13 557 aa18.96■□□□□ 0.63
TRIM56-202ENST00000412507 TPRG1LQ5T0D9 272 aa18.96■□□□□ 0.63
TRIM56-202ENST00000412507 NPNTQ6UXI9 565 aa18.96■□□□□ 0.63
TRIM56-202ENST00000412507 GLRX5Q86SX6 157 aa18.96■□□□□ 0.63
TRIM56-202ENST00000412507 DCP2Q8IU60 420 aaKnown RBP18.96■□□□□ 0.63
TRIM56-202ENST00000412507 EID2Q8N6I1 236 aa18.96■□□□□ 0.63
TRIM56-202ENST00000412507 PNPLA1Q8N8W4 532 aa18.96■□□□□ 0.63
TRIM56-202ENST00000412507 ACRBPQ8NEB7 543 aa18.96■□□□□ 0.63
TRIM56-202ENST00000412507 HDAC11Q96DB2 347 aa18.96■□□□□ 0.63
TRIM56-202ENST00000412507 BAG1Q99933 345 aaPredicted RBP18.96■□□□□ 0.63
TRIM56-202ENST00000412507 SEMA3CQ99985 751 aa18.96■□□□□ 0.63
TRIM56-202ENST00000412507 C1QTNF7Q9BXJ2 289 aa18.96■□□□□ 0.63
TRIM56-202ENST00000412507 MBNL1Q9NR56 388 aaKnown RBP18.96■□□□□ 0.63
TRIM56-202ENST00000412507 GPR27Q9NS67 375 aa18.96■□□□□ 0.63
TRIM56-202ENST00000412507 RBM22Q9NW64 420 aaKnown RBP eCLIP18.96■□□□□ 0.634e-6■□□□□ 10.1
TRIM56-202ENST00000412507 GOLGA8CPA6NN73 597 aa18.95■□□□□ 0.62
TRIM56-202ENST00000412507 A8MX80 341 aa18.95■□□□□ 0.62
TRIM56-202ENST00000412507 PSTPIP1O43586 416 aa18.95■□□□□ 0.62
TRIM56-202ENST00000412507 CPP00450 1065 aa18.95■□□□□ 0.62
TRIM56-202ENST00000412507 ATXN1LP0C7T5 689 aaKnown RBP18.95■□□□□ 0.62
TRIM56-202ENST00000412507 CCNB1P14635 433 aa18.95■□□□□ 0.62
TRIM56-202ENST00000412507 SPINK2P20155 84 aa18.95■□□□□ 0.62
TRIM56-202ENST00000412507 PFN3P60673 137 aa18.95■□□□□ 0.62
TRIM56-202ENST00000412507 DYNLT1P63172 113 aa18.95■□□□□ 0.62
TRIM56-202ENST00000412507 RALGDSQ12967 914 aa18.95■□□□□ 0.62
TRIM56-202ENST00000412507 FZD2Q14332 565 aa18.95■□□□□ 0.62
TRIM56-202ENST00000412507 IRF4Q15306 451 aa18.95■□□□□ 0.62
TRIM56-202ENST00000412507 ZNF542PQ5EBM4 170 aa18.95■□□□□ 0.62
TRIM56-202ENST00000412507 C11orf63Q6NUN7 778 aa18.95■□□□□ 0.62
TRIM56-202ENST00000412507 DPPA4Q7L190 304 aa18.95■□□□□ 0.62
TRIM56-202ENST00000412507 KANSL1Q7Z3B3 1105 aa18.95■□□□□ 0.62
TRIM56-202ENST00000412507 SLCO6A1Q86UG4 719 aa18.95■□□□□ 0.62
TRIM56-202ENST00000412507 TMEM139Q8IV31 216 aa18.95■□□□□ 0.62
TRIM56-202ENST00000412507 CCDC13Q8IYE1 715 aa18.95■□□□□ 0.62
TRIM56-202ENST00000412507 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.95■□□□□ 0.62
TRIM56-202ENST00000412507 TPCN2Q8NHX9 752 aa18.95■□□□□ 0.62
TRIM56-202ENST00000412507 FATE1Q969F0 183 aa18.95■□□□□ 0.62
TRIM56-202ENST00000412507 ZNF830Q96NB3 372 aaPredicted RBP18.95■□□□□ 0.62
TRIM56-202ENST00000412507 LGMNQ99538 433 aa18.95■□□□□ 0.62
TRIM56-202ENST00000412507 POLR1EQ9GZS1 481 aaKnown RBP18.95■□□□□ 0.62
TRIM56-202ENST00000412507 IMPACTQ9P2X3 320 aa18.95■□□□□ 0.62
TRIM56-202ENST00000412507 TTLL3Q9Y4R7 772 aa18.95■□□□□ 0.62
TRIM56-202ENST00000412507 DUSP10Q9Y6W6 482 aa18.95■□□□□ 0.62
TRIM56-202ENST00000412507 SPTY2D1-AS1A0A0U1RR47 76 aa18.94■□□□□ 0.62
TRIM56-202ENST00000412507 LZTS3O60299 673 aaPredicted RBP18.94■□□□□ 0.62
TRIM56-202ENST00000412507 NEBLO76041 1014 aa18.94■□□□□ 0.62
TRIM56-202ENST00000412507 HLA-DQB2P05538 268 aa18.94■□□□□ 0.62
TRIM56-202ENST00000412507 MARCKSL1P49006 195 aa18.94■□□□□ 0.62
TRIM56-202ENST00000412507 SHC2P98077 582 aa18.94■□□□□ 0.62
TRIM56-202ENST00000412507 DSC2Q02487 901 aa18.94■□□□□ 0.62
TRIM56-202ENST00000412507 PPIDQ08752 370 aaKnown RBP18.94■□□□□ 0.62
TRIM56-202ENST00000412507 LLGL1Q15334 1064 aa18.94■□□□□ 0.62
TRIM56-202ENST00000412507 WSCD2Q2TBF2 565 aa18.94■□□□□ 0.62
TRIM56-202ENST00000412507 LIPIQ6XZB0 460 aa18.94■□□□□ 0.62
TRIM56-202ENST00000412507 DAAM2Q86T65 1068 aa18.94■□□□□ 0.62
TRIM56-202ENST00000412507 DNAJC28Q9NX36 388 aa18.94■□□□□ 0.62
TRIM56-202ENST00000412507 TOR4AQ9NXH8 423 aa18.94■□□□□ 0.62
TRIM56-202ENST00000412507 B4GALT6Q9UBX8 382 aa18.94■□□□□ 0.62
TRIM56-202ENST00000412507 FTSJ1Q9UET6 329 aa18.94■□□□□ 0.62
TRIM56-202ENST00000412507 WASF3Q9UPY6 502 aa18.94■□□□□ 0.62
TRIM56-202ENST00000412507 APOBEC2Q9Y235 224 aaKnown RBP18.94■□□□□ 0.62
TRIM56-202ENST00000412507 MAP1BP46821 2468 aaKnown RBP18.94■□□□□ 0.62
TRIM56-202ENST00000412507 A0A1W2PQ67 120 aa18.93■□□□□ 0.62
TRIM56-202ENST00000412507 TNFSF14O43557 240 aa18.93■□□□□ 0.62
TRIM56-202ENST00000412507 HYAL3O43820 417 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms