RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 PACSIN2Q9UNF0 486 aaPredicted RBP8.28□□□□□ -1.08
RPE-204ENST00000411934 HS3ST3A1Q9Y663 406 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 RALGAPA1Q6GYQ0 2036 aa8.28□□□□□ -1.08
RPE-204ENST00000411934 RIF1Q5UIP0 2472 aaKnown RBP8.28□□□□□ -1.08
RPE-204ENST00000411934 GOLGA6CA6NDK9 693 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 GOLGA6BA6NDN3 693 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 H7C0C1 242 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 NEMP1O14524 444 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 KCNK3O14649 394 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 VILLO15195 856 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 SPINT1O43278 529 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 OPHN1O60890 802 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 PCDH8O95206 1070 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 CER1O95813 267 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 EPOP01588 193 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 JCHAINP01591 159 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 GOLGA6DP0CG33 693 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 TIMP2P16035 220 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 CD38P28907 300 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 STIP1P31948 543 aaKnown RBP8.27□□□□□ -1.09
RPE-204ENST00000411934 GKP32189 559 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 ATP5OP48047 213 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 EIF3EP60228 445 aaKnown RBP8.27□□□□□ -1.09
RPE-204ENST00000411934 MAXP61244 160 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 PPP2CBP62714 309 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 PPP2CAP67775 309 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 SPEM2Q0P670 501 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 WASHC5Q12768 1159 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 TRAF2Q12933 501 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 MPP3Q13368 585 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 ZNF284Q2VY69 593 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 P3H1Q32P28 736 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 POM121L1PQ3SYA9 428 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 KYAT3Q6YP21 454 aaKnown RBP8.27□□□□□ -1.09
RPE-204ENST00000411934 ARMCX6Q7L4S7 300 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 ZC3H18Q86VM9 953 aaKnown RBP8.27□□□□□ -1.09
RPE-204ENST00000411934 SLC13A5Q86YT5 568 aaPredicted RBP8.27□□□□□ -1.09
RPE-204ENST00000411934 CAMK1DQ8IU85 385 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 KLHDC8BQ8IXV7 354 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 RASGEF1CQ8N431 466 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 ZCCHC9Q8N567 271 aaKnown RBP8.27□□□□□ -1.09
RPE-204ENST00000411934 CNTD1Q8N815 330 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 MFSD2AQ8NA29 543 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 NETO2Q8NC67 525 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 SLC35B2Q8TB61 432 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 SNX19Q92543 992 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 LRRC45Q96CN5 670 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 IFT43Q96FT9 208 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 SCRN2Q96FV2 425 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 PBKQ96KB5 322 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 FCRL5Q96RD9 977 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 C19orf43Q9BQ61 176 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 HEMGNQ9BXL5 484 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 ADGRE3Q9BY15 652 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 GBA3Q9H227 469 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 ERVMER34-1Q9H9K5 563 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 GLOD4Q9HC38 313 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 TM9SF3Q9HD45 589 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 PCDH12Q9NPG4 1184 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 TMEM74BQ9NUR3 256 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 GOLGA6AQ9NYA3 693 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 FAM153AQ9UHL3 310 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 ZFR2Q9UPR6 939 aaKnown RBP8.27□□□□□ -1.09
RPE-204ENST00000411934 RAI2Q9Y5P3 530 aa8.27□□□□□ -1.09
RPE-204ENST00000411934 EP300Q09472 2414 aaPredicted RBP8.27□□□□□ -1.09
RPE-204ENST00000411934 PI4KAP42356 2102 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 TRPM6Q9BX84 2022 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 DMDP11532 3685 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 A0A0J9YYE9 177 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 A0A1W2PQU0 124 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 LNP1A1A4G5 178 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 C5orf60A6NFR6 353 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 CAPN8A6NHC0 703 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 FAM47DPA6NHR8 397 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 A6NNZ2 444 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 RNF103O00237 685 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 PLK4O00444 970 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 ARHGAP33O14559 1287 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 ANXA9O76027 345 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 TM7SF2O76062 418 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 TRBC1P01850 177 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 PYGLP06737 847 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 MMP2P08253 660 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 ELFN1P0C7U0 828 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 HLA-DPA1P20036 260 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 TEAD1P28347 426 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 VIPR1P32241 457 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 TNNT3P45378 269 aaPredicted RBP8.26□□□□□ -1.09
RPE-204ENST00000411934 RABIFP47224 123 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 GEMP55040 296 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 SKOR1P84550 965 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 DSC2Q02487 901 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 ITKQ08881 620 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 SGCGQ13326 291 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 SLC14A1Q13336 389 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 ZNF211Q13398 564 aaPredicted RBP8.26□□□□□ -1.09
RPE-204ENST00000411934 AASDHQ4L235 1098 aaPredicted RBP8.26□□□□□ -1.09
RPE-204ENST00000411934 HS1BP3Q53T59 392 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 C4orf22Q6V702 233 aa8.26□□□□□ -1.09
RPE-204ENST00000411934 ADAT2Q7Z6V5 191 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms