RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 CD207Q9UJ71 328 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 SUFUQ9UMX1 484 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 CYP46A1Q9Y6A2 500 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 KIF16BQ96L93 1317 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 KANK1Q14678 1352 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 GPRASP1Q5JY77 1395 aa2.61□□□□□ -1.99
HMGB3P2-201ENST00000411913 ANKRD50Q9ULJ7 1429 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 PZPP20742 1482 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 GRIN2BQ13224 1484 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 F5H0A9 414 aaPredicted RBP2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 GRM8O00222 908 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 BMPR1BO00238 502 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 BAIAP3O94812 1187 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 KAT7O95251 611 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 METTL18O95568 372 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 NFATC1O95644 943 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 DDX58O95786 925 aaKnown RBP2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 PTMAP06454 111 aaKnown RBP2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 ATP1A3P13637 1013 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 CAPN3P20807 821 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 MCCP23508 829 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 PGM1P36871 562 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 STAT6P42226 847 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 GPD2P43304 727 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 CASP6P55212 293 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 HNRNPH2P55795 449 aaKnown RBP2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 CDK18Q07002 472 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 TRAF1Q13077 416 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 ALKBH1Q13686 389 aaKnown RBP2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 PLCB4Q15147 1175 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 HLFQ16534 295 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 PMS2CLQ68D20 193 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 ACAD10Q6JQN1 1059 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 FAM180BQ6P0A1 224 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 KIAA1324Q6UXG2 1013 aaKnown RBP2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 SYNE3Q6ZMZ3 975 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 CYB5R4Q7L1T6 521 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 RPAINQ86UA6 219 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 CNPY4Q8N129 248 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 KRT222Q8N1A0 295 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 IQUBQ8NA54 791 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 FAM184AQ8NB25 1140 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 LSM14AQ8ND56 463 aaKnown RBP2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 ZCCHC10Q8TBK6 192 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 STAMQ92783 540 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 ZUFSPQ96AP4 578 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 RNF125Q96EQ8 232 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 C7orf26Q96N11 449 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 MYCBPQ99417 103 aaPredicted RBP2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 FUZQ9BT04 418 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 PHF7Q9BWX1 381 aaPredicted RBP2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 STN1Q9H668 368 aaKnown RBP2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 CATSPERBQ9H7T0 1116 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 SFXN1Q9H9B4 322 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 DIAPH3Q9NSV4 1193 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 SMC4Q9NTJ3 1288 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 THAP1Q9NVV9 213 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 ZNF446Q9NWS9 450 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 IRAK4Q9NWZ3 460 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 DONSONQ9NYP3 566 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 SWAP70Q9UH65 585 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 CNOT7Q9UIV1 285 aaKnown RBP2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 FBXO9Q9UK97 447 aaPredicted RBP2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 HSF4Q9ULV5 492 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 ARHGAP26Q9UNA1 814 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 B3GNT3Q9Y2A9 372 aa2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 DDX49Q9Y6V7 483 aaKnown RBP2.6□□□□□ -1.99
HMGB3P2-201ENST00000411913 PRDM2Q13029 1718 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 ABCC10Q5T3U5 1492 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 EHBP1L1Q8N3D4 1523 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 KDM5DQ9BY66 1539 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 SYNMO15061 1565 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 A0A087X0M5 115 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 IGKV3D-20A0A0C4DH25 116 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 GOLGA6L10A0A0M3HER8 536 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 A0A1B0GX30 115 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 NPIPB13A6NJU9 1138 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 FAM90A7PA6NKC0 464 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 NPIPB5A8MRT5 1133 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 FAM90A22PA8MWA6 464 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 FAM90A12PA8MX19 464 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 FAM90A23PA8MXZ1 464 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 NPIPB4C9JG80 1138 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 PEX12O00623 359 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 KIF1CO43896 1103 aaKnown RBP2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 TMEM63AO94886 807 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 TPM3P06753 285 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 WEE2P0C1S8 567 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 CCDC172P0C7W6 258 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 ARSAP15289 507 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 HOXB9P17482 250 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 TGM2P21980 687 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 BDNFP23560 247 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 PRPH2P23942 346 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 CASQ1P31415 396 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 RFX5P48382 616 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 RPS6KA3P51812 740 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 MVDP53602 400 aa2.59□□□□□ -1.99
HMGB3P2-201ENST00000411913 SLC37A1P57057 533 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms