RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 DAAM1Q9Y4D1 1078 aa16.86■□□□□ 0.29
MRPL55-220ENST00000411464 A0A1W2PQM1 296 aa16.85■□□□□ 0.29
MRPL55-220ENST00000411464 RASA4BC9J798 803 aa16.85■□□□□ 0.29
MRPL55-220ENST00000411464 NVLO15381 856 aaKnown RBP16.85■□□□□ 0.29
MRPL55-220ENST00000411464 INSIG1O15503 277 aa16.85■□□□□ 0.29
MRPL55-220ENST00000411464 RASA4O43374 803 aa16.85■□□□□ 0.29
MRPL55-220ENST00000411464 NOBOXO60393 691 aa16.85■□□□□ 0.29
MRPL55-220ENST00000411464 PIGNO95427 931 aa16.85■□□□□ 0.29
MRPL55-220ENST00000411464 HGFP14210 728 aa16.85■□□□□ 0.29
MRPL55-220ENST00000411464 CCKBRP32239 447 aa16.85■□□□□ 0.29
MRPL55-220ENST00000411464 LIG3P49916 1009 aa16.85■□□□□ 0.29
MRPL55-220ENST00000411464 SERINC3Q13530 473 aa16.85■□□□□ 0.29
MRPL55-220ENST00000411464 TGIF1Q15583 401 aa16.85■□□□□ 0.29
MRPL55-220ENST00000411464 PARP15Q460N3 678 aa16.85■□□□□ 0.29
MRPL55-220ENST00000411464 EFHC2Q5JST6 749 aa16.85■□□□□ 0.29
MRPL55-220ENST00000411464 TRIM72Q6ZMU5 477 aa16.85■□□□□ 0.29
MRPL55-220ENST00000411464 DNAAF5Q86Y56 855 aa16.85■□□□□ 0.29
MRPL55-220ENST00000411464 Q8N9G6 341 aaPredicted RBP16.85■□□□□ 0.29
MRPL55-220ENST00000411464 EXD3Q8N9H8 876 aa16.85■□□□□ 0.29
MRPL55-220ENST00000411464 TMEM159Q96B96 161 aa16.85■□□□□ 0.29
MRPL55-220ENST00000411464 EXOC2Q96KP1 924 aa16.85■□□□□ 0.29
MRPL55-220ENST00000411464 WDR92Q96MX6 357 aa16.85■□□□□ 0.29
MRPL55-220ENST00000411464 SELENOOQ9BVL4 669 aa16.85■□□□□ 0.29
MRPL55-220ENST00000411464 KLC2Q9H0B6 622 aa16.85■□□□□ 0.29
MRPL55-220ENST00000411464 NOL6Q9H6R4 1146 aaKnown RBP16.85■□□□□ 0.29
MRPL55-220ENST00000411464 DACH1Q9UI36 760 aa16.85■□□□□ 0.29
MRPL55-220ENST00000411464 COL6A6A6NMZ7 2263 aa16.85■□□□□ 0.29
MRPL55-220ENST00000411464 PIEZO2Q9H5I5 2752 aa16.84■□□□□ 0.29
MRPL55-220ENST00000411464 CREB3O43889 395 aa16.84■□□□□ 0.29
MRPL55-220ENST00000411464 ITGB2P05107 769 aa16.84■□□□□ 0.29
MRPL55-220ENST00000411464 PCCBP05166 539 aa16.84■□□□□ 0.29
MRPL55-220ENST00000411464 LIPCP11150 499 aa16.84■□□□□ 0.29
MRPL55-220ENST00000411464 GLB1P16278 677 aa16.84■□□□□ 0.29
MRPL55-220ENST00000411464 GPD1P21695 349 aa16.84■□□□□ 0.29
MRPL55-220ENST00000411464 RFC1P35251 1148 aaPredicted RBP16.84■□□□□ 0.29
MRPL55-220ENST00000411464 NSFP46459 744 aaKnown RBP16.84■□□□□ 0.29
MRPL55-220ENST00000411464 FMO1Q01740 532 aa16.84■□□□□ 0.29
MRPL55-220ENST00000411464 CYTH1Q15438 398 aa16.84■□□□□ 0.29
MRPL55-220ENST00000411464 SCYL2Q6P3W7 929 aa16.84■□□□□ 0.29
MRPL55-220ENST00000411464 BRAT1Q6PJG6 821 aa16.84■□□□□ 0.29
MRPL55-220ENST00000411464 TAF8Q7Z7C8 310 aa16.84■□□□□ 0.29
MRPL55-220ENST00000411464 CCNJLQ8IV13 435 aa16.84■□□□□ 0.29
MRPL55-220ENST00000411464 PYROXD2Q8N2H3 581 aa16.84■□□□□ 0.29
MRPL55-220ENST00000411464 FAM46DQ8NEK8 389 aa16.84■□□□□ 0.29
MRPL55-220ENST00000411464 ZNF641Q96N77 438 aaPredicted RBP16.84■□□□□ 0.29
MRPL55-220ENST00000411464 RBM15Q96T37 977 aaKnown RBP eCLIP16.84■□□□□ 0.29
MRPL55-220ENST00000411464 CATSPERBQ9H7T0 1116 aa16.84■□□□□ 0.29
MRPL55-220ENST00000411464 ADAM22Q9P0K1 906 aa16.84■□□□□ 0.29
MRPL55-220ENST00000411464 LHX3Q9UBR4 397 aa16.84■□□□□ 0.29
MRPL55-220ENST00000411464 UBA2Q9UBT2 640 aaPredicted RBP16.84■□□□□ 0.29
MRPL55-220ENST00000411464 APPL1Q9UKG1 709 aa16.84■□□□□ 0.29
MRPL55-220ENST00000411464 LOXL2Q9Y4K0 774 aa16.84■□□□□ 0.29
MRPL55-220ENST00000411464 DGKBQ9Y6T7 804 aa16.84■□□□□ 0.29
MRPL55-220ENST00000411464 ARHGAP6O43182 974 aa16.83■□□□□ 0.28
MRPL55-220ENST00000411464 CHRNB2P17787 502 aa16.83■□□□□ 0.28
MRPL55-220ENST00000411464 CSRP3P50461 194 aa16.83■□□□□ 0.28
MRPL55-220ENST00000411464 MTM1Q13496 603 aa16.83■□□□□ 0.28
MRPL55-220ENST00000411464 ARHGEF7Q14155 803 aa16.83■□□□□ 0.28
MRPL55-220ENST00000411464 AGERQ15109 404 aa16.83■□□□□ 0.28
MRPL55-220ENST00000411464 DPCR1Q3MIW9 517 aa16.83■□□□□ 0.28
MRPL55-220ENST00000411464 LINC00303Q3SY05 128 aa16.83■□□□□ 0.28
MRPL55-220ENST00000411464 TCP11X2Q5H9J9 407 aa16.83■□□□□ 0.28
MRPL55-220ENST00000411464 MANEAQ5SRI9 462 aa16.83■□□□□ 0.28
MRPL55-220ENST00000411464 WDR59Q6PJI9 974 aa16.83■□□□□ 0.28
MRPL55-220ENST00000411464 ZSCAN1Q8NBB4 408 aa16.83■□□□□ 0.28
MRPL55-220ENST00000411464 GPR156Q8NFN8 814 aa16.83■□□□□ 0.28
MRPL55-220ENST00000411464 CMKLR1Q99788 373 aa16.83■□□□□ 0.28
MRPL55-220ENST00000411464 SAMSN1Q9NSI8 373 aaKnown RBP16.83■□□□□ 0.28
MRPL55-220ENST00000411464 DONSONQ9NYP3 566 aa16.83■□□□□ 0.28
MRPL55-220ENST00000411464 PCDHB11Q9Y5F2 797 aa16.83■□□□□ 0.28
MRPL55-220ENST00000411464 TSPAN11A1L157 253 aa16.82■□□□□ 0.28
MRPL55-220ENST00000411464 ANKRD62A6NC57 917 aa16.82■□□□□ 0.28
MRPL55-220ENST00000411464 AGRPO00253 132 aa16.82■□□□□ 0.28
MRPL55-220ENST00000411464 CACNB4O00305 520 aaPredicted RBP16.82■□□□□ 0.28
MRPL55-220ENST00000411464 SFTPCP11686 197 aa16.82■□□□□ 0.28
MRPL55-220ENST00000411464 PNLIPP16233 465 aa16.82■□□□□ 0.28
MRPL55-220ENST00000411464 EEF1GP26641 437 aaKnown RBP16.82■□□□□ 0.28
MRPL55-220ENST00000411464 SOX5P35711 763 aa16.82■□□□□ 0.28
MRPL55-220ENST00000411464 POLR2FP61218 127 aaKnown RBP16.82■□□□□ 0.28
MRPL55-220ENST00000411464 ZFP36L1Q07352 338 aaKnown RBP16.82■□□□□ 0.28
MRPL55-220ENST00000411464 CERCAMQ5T4B2 595 aa16.82■□□□□ 0.28
MRPL55-220ENST00000411464 OGFOD3Q6PK18 319 aa16.82■□□□□ 0.28
MRPL55-220ENST00000411464 NYAP1Q6ZVC0 841 aa16.82■□□□□ 0.28
MRPL55-220ENST00000411464 UMODL1-AS1Q8N2C9 162 aa16.82■□□□□ 0.28
MRPL55-220ENST00000411464 PAF1Q8N7H5 531 aa16.82■□□□□ 0.28
MRPL55-220ENST00000411464 OR56A4Q8NGH8 313 aa16.82■□□□□ 0.28
MRPL55-220ENST00000411464 EXTL1Q92935 676 aa16.82■□□□□ 0.28
MRPL55-220ENST00000411464 PDXPQ96GD0 296 aa16.82■□□□□ 0.28
MRPL55-220ENST00000411464 TUBGCP5Q96RT8 1024 aa16.82■□□□□ 0.28
MRPL55-220ENST00000411464 TAB2Q9NYJ8 693 aa16.82■□□□□ 0.28
MRPL55-220ENST00000411464 LRIT1Q9P2V4 623 aa16.82■□□□□ 0.28
MRPL55-220ENST00000411464 IL17BQ9UHF5 180 aa16.82■□□□□ 0.28
MRPL55-220ENST00000411464 ATP8A1Q9Y2Q0 1164 aa16.82■□□□□ 0.28
MRPL55-220ENST00000411464 PRAMEF33A0A0G2JMD5 474 aa16.81■□□□□ 0.28
MRPL55-220ENST00000411464 CFAP69A5D8W1 941 aa16.81■□□□□ 0.28
MRPL55-220ENST00000411464 SIGLEC16A6NMB1 481 aa16.81■□□□□ 0.28
MRPL55-220ENST00000411464 WASH4PA8MWX3 477 aa16.81■□□□□ 0.28
MRPL55-220ENST00000411464 BUB1BO60566 1050 aaPredicted RBP16.81■□□□□ 0.28
MRPL55-220ENST00000411464 PRAMEF10O60809 474 aa16.81■□□□□ 0.28
MRPL55-220ENST00000411464 CALB1P05937 261 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms