RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 MB21D1Q8N884 522 aa5.05□□□□□ -1.6
LSM5-205ENST00000409952 ANKRD20A12PQ8NF67 263 aa5.05□□□□□ -1.6
LSM5-205ENST00000409952 PTPMT1Q8WUK0 201 aaPredicted RBP5.05□□□□□ -1.6
LSM5-205ENST00000409952 ZFAND2BQ8WV99 257 aa5.05□□□□□ -1.6
LSM5-205ENST00000409952 R3HDM4Q96D70 268 aa5.05□□□□□ -1.6
LSM5-205ENST00000409952 ZNF503Q96F45 646 aa5.05□□□□□ -1.6
LSM5-205ENST00000409952 TMEM176AQ96HP8 235 aa5.05□□□□□ -1.6
LSM5-205ENST00000409952 C16orf45Q96MC5 204 aaPredicted RBP5.05□□□□□ -1.6
LSM5-205ENST00000409952 DCLRE1CQ96SD1 692 aaKnown RBP5.05□□□□□ -1.6
LSM5-205ENST00000409952 CADM1Q9BY67 442 aaKnown RBP5.05□□□□□ -1.6
LSM5-205ENST00000409952 IFIH1Q9BYX4 1025 aaKnown RBP5.05□□□□□ -1.6
LSM5-205ENST00000409952 RANGRFQ9HD47 186 aaPredicted RBP5.05□□□□□ -1.6
LSM5-205ENST00000409952 ABHD10Q9NUJ1 306 aa5.05□□□□□ -1.6
LSM5-205ENST00000409952 CNOT8Q9UFF9 292 aaKnown RBP5.05□□□□□ -1.6
LSM5-205ENST00000409952 LEF1Q9UJU2 399 aaPredicted RBP5.05□□□□□ -1.6
LSM5-205ENST00000409952 EXO1Q9UQ84 846 aaKnown RBP5.05□□□□□ -1.6
LSM5-205ENST00000409952 CMAHPQ9Y471 501 aa5.05□□□□□ -1.6
LSM5-205ENST00000409952 OR6C68A6NDL8 312 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 DIRC3C9JPN6 131 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 IFNL4K9M1U5 179 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 DSCR3O14972 297 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 USP12O75317 370 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 ALDOCP09972 364 aaKnown RBP5.04□□□□□ -1.6
LSM5-205ENST00000409952 PTPN3P26045 913 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 TYK2P29597 1187 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 AGTR2P50052 363 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 YWHAZP63104 245 aaKnown RBP5.04□□□□□ -1.6
LSM5-205ENST00000409952 SHC2P98077 582 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 TFAP4Q01664 338 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 VEPH1Q14D04 833 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 GEN1Q17RS7 908 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 TEDDM1Q5T9Z0 273 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 DPY19L3Q6ZPD9 716 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 MOB3CQ70IA8 216 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 MAVSQ7Z434 540 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 SPATA19Q7Z5L4 167 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 AACSQ86V21 672 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 PEX5LQ8IYB4 626 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 GUF1Q8N442 669 aaKnown RBP5.04□□□□□ -1.6
LSM5-205ENST00000409952 SCAIQ8N9R8 606 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 TSPAN14Q8NG11 270 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 LINC00615Q96LM1 132 aaPredicted RBP5.04□□□□□ -1.6
LSM5-205ENST00000409952 FYTTD1Q96QD9 318 aaKnown RBP5.04□□□□□ -1.6
LSM5-205ENST00000409952 PRR25Q96S07 402 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 RNF26Q9BY78 433 aaPredicted RBP5.04□□□□□ -1.6
LSM5-205ENST00000409952 TASP1Q9H6P5 420 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 USP29Q9HBJ7 922 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 TMEM248Q9NWD8 314 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 DCAF16Q9NXF7 216 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 CRNNQ9UBG3 495 aaPredicted RBP5.04□□□□□ -1.6
LSM5-205ENST00000409952 MGAT4CQ9UBM8 478 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 CDH7Q9ULB5 785 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 PLAGL1Q9UM63 463 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 DHDHQ9UQ10 334 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 B3GNT3Q9Y2A9 372 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 AAR2Q9Y312 384 aaKnown RBP5.04□□□□□ -1.6
LSM5-205ENST00000409952 REXO2Q9Y3B8 237 aaKnown RBP5.04□□□□□ -1.6
LSM5-205ENST00000409952 CLDN16Q9Y5I7 305 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 LIPGQ9Y5X9 500 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 IKBKGQ9Y6K9 419 aa5.04□□□□□ -1.6
LSM5-205ENST00000409952 A0A1B0GVM2 712 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 HTR3EA5X5Y0 456 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 ZNF185O15231 689 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 PRAMEF2O60811 474 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 ZC3H11AO75152 810 aaKnown RBP eCLIP5.03□□□□□ -1.6
LSM5-205ENST00000409952 SOCS5O75159 536 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 NKX2-2O95096 273 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 C1RP00736 705 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 SERPINC1P01008 464 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 MBPP02686 304 aaPredicted RBP5.03□□□□□ -1.6
LSM5-205ENST00000409952 ACTN1P12814 892 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 ZFXP17010 805 aaPredicted RBP5.03□□□□□ -1.6
LSM5-205ENST00000409952 PRKCIP41743 596 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 GPC3P51654 580 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 YPEL5P62699 121 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 ARF5P84085 180 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 FOXE3Q13461 319 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 KCNC3Q14003 757 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 PPP2R5BQ15173 497 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 RPE65Q16518 533 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 CYP1B1Q16678 543 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 CXorf66Q5JRM2 361 aaPredicted RBP5.03□□□□□ -1.6
LSM5-205ENST00000409952 TOR1AIP1Q5JTV8 583 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 SP5Q6BEB4 398 aaPredicted RBP5.03□□□□□ -1.6
LSM5-205ENST00000409952 PTCHD4Q6ZW05 846 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 RABEPKQ7Z6M1 372 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 CEP57Q86XR8 500 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 D2HGDHQ8N465 521 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 HDDC3Q8N4P3 179 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 RTL3Q8N8U3 475 aaKnown RBP5.03□□□□□ -1.6
LSM5-205ENST00000409952 ZNF540Q8NDQ6 660 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 IL17DQ8TAD2 202 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 TEKT4Q8WW24 435 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 XAGE5Q8WWM1 108 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 EXTL1Q92935 676 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 PABPC5Q96DU9 382 aaKnown RBP5.03□□□□□ -1.6
LSM5-205ENST00000409952 ARSGQ96EG1 525 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 BICD1Q96G01 975 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 GPR88Q9GZN0 384 aa5.03□□□□□ -1.6
LSM5-205ENST00000409952 INTS13Q9NVM9 706 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms