RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 KIAA1549LQ6ZVL6 1849 aa17.05■□□□□ 0.32
GCFC2-202ENST00000409857 SPAG6O75602 509 aa17.05■□□□□ 0.32
GCFC2-202ENST00000409857 TACR2P21452 398 aa17.05■□□□□ 0.32
GCFC2-202ENST00000409857 SLC6A4P31645 630 aa17.05■□□□□ 0.32
GCFC2-202ENST00000409857 ZNF135P52742 658 aaPredicted RBP17.05■□□□□ 0.32
GCFC2-202ENST00000409857 PFKPQ01813 784 aa17.05■□□□□ 0.32
GCFC2-202ENST00000409857 IZUMO2Q6UXV1 221 aa17.05■□□□□ 0.32
GCFC2-202ENST00000409857 UNC5AQ6ZN44 842 aa17.05■□□□□ 0.32
GCFC2-202ENST00000409857 NDUFAF2Q8N183 169 aa17.05■□□□□ 0.32
GCFC2-202ENST00000409857 CPA6Q8N4T0 437 aa17.05■□□□□ 0.32
GCFC2-202ENST00000409857 PLD5Q8N7P1 536 aa17.05■□□□□ 0.32
GCFC2-202ENST00000409857 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.05■□□□□ 0.32
GCFC2-202ENST00000409857 SPHK2Q9NRA0 654 aa17.05■□□□□ 0.32
GCFC2-202ENST00000409857 TAGLN3Q9UI15 199 aa17.05■□□□□ 0.32
GCFC2-202ENST00000409857 MAD1L1Q9Y6D9 718 aa17.05■□□□□ 0.32
GCFC2-202ENST00000409857 SPECC1L-ADORA2AF8WAN1 911 aa17.05■□□□□ 0.32
GCFC2-202ENST00000409857 TM7SF2O76062 418 aa17.05■□□□□ 0.32
GCFC2-202ENST00000409857 ADH1CP00326 375 aa17.05■□□□□ 0.32
GCFC2-202ENST00000409857 HTR7P34969 479 aa17.05■□□□□ 0.32
GCFC2-202ENST00000409857 RUNX3Q13761 415 aa17.05■□□□□ 0.32
GCFC2-202ENST00000409857 MPP7Q5T2T1 576 aa17.05■□□□□ 0.32
GCFC2-202ENST00000409857 ATG16L1Q676U5 607 aa17.05■□□□□ 0.32
GCFC2-202ENST00000409857 ZFYVE19Q96K21 471 aa17.05■□□□□ 0.32
GCFC2-202ENST00000409857 RNF157Q96PX1 679 aa17.05■□□□□ 0.32
GCFC2-202ENST00000409857 SNRNP25Q9BV90 132 aaKnown RBP17.05■□□□□ 0.32
GCFC2-202ENST00000409857 F5H5T6 163 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 SCAMP3O14828 347 aaKnown RBP17.04■□□□□ 0.32
GCFC2-202ENST00000409857 IL4RP24394 825 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 PRKCHP24723 683 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 L1CAMP32004 1257 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 POLE2P56282 527 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 SARNPP82979 210 aaKnown RBP17.04■□□□□ 0.32
GCFC2-202ENST00000409857 DHCR24Q15392 516 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 ZRSR2Q15696 482 aaKnown RBP17.04■□□□□ 0.32
GCFC2-202ENST00000409857 MPPE1Q53F39 396 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 C1orf146Q5VVC0 180 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 RAP1GAP2Q684P5 730 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 NET1Q7Z628 596 aaPredicted RBP17.04■□□□□ 0.32
GCFC2-202ENST00000409857 ZNF683Q8IZ20 524 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 WWP1Q9H0M0 922 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 EBF3Q9H4W6 596 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 RETREG1Q9H6L5 497 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 TMPRSS4Q9NRS4 437 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 ETNK2Q9NVF9 386 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 PAK5Q9P286 719 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 SLC17A6Q9P2U8 582 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 AP4E1Q9UPM8 1137 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 MYOFQ9NZM1 2061 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 MAGEA13PA6NCF6 341 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 HOXC11O43248 304 aaPredicted RBP17.04■□□□□ 0.32
GCFC2-202ENST00000409857 LYPLA1O75608 230 aaPredicted RBP17.04■□□□□ 0.32
GCFC2-202ENST00000409857 CYBBP04839 570 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 CYP17A1P05093 508 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 GRIA1P42261 906 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 SEMA3BQ13214 749 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 KRT81Q14533 505 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 ITPRIPL2Q3MIP1 535 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 CWF19L1Q69YN2 538 aaKnown RBP17.04■□□□□ 0.32
GCFC2-202ENST00000409857 C16orf46Q6P387 395 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 MYLK4Q86YV6 388 aaPredicted RBP17.04■□□□□ 0.32
GCFC2-202ENST00000409857 CRLF3Q8IUI8 442 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 UNC5BQ8IZJ1 945 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 PQLC3Q8N755 202 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 OR12D3Q9UGF7 316 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 ZNF180Q9UJW8 692 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 ANGPTL2Q9UKU9 493 aa17.04■□□□□ 0.32
GCFC2-202ENST00000409857 IGLV3-10A0A075B6K4 115 aa17.03■□□□□ 0.32
GCFC2-202ENST00000409857 F5H423 210 aaPredicted RBP17.03■□□□□ 0.32
GCFC2-202ENST00000409857 F8W8V4 182 aa17.03■□□□□ 0.32
GCFC2-202ENST00000409857 PENKP01210 267 aaPredicted RBP17.03■□□□□ 0.32
GCFC2-202ENST00000409857 ARSAP15289 507 aa17.03■□□□□ 0.32
GCFC2-202ENST00000409857 CCNFP41002 786 aa17.03■□□□□ 0.32
GCFC2-202ENST00000409857 ACTR3P61158 418 aa17.03■□□□□ 0.32
GCFC2-202ENST00000409857 SMAD1Q15797 465 aaKnown RBP17.03■□□□□ 0.32
GCFC2-202ENST00000409857 DPYSL2Q16555 572 aa17.03■□□□□ 0.32
GCFC2-202ENST00000409857 CA9Q16790 459 aa17.03■□□□□ 0.32
GCFC2-202ENST00000409857 RABGAP1LQ5R372 815 aa17.03■□□□□ 0.32
GCFC2-202ENST00000409857 MANEALQ5VSG8 457 aa17.03■□□□□ 0.32
GCFC2-202ENST00000409857 UBALD2Q8IYN6 164 aa17.03■□□□□ 0.32
GCFC2-202ENST00000409857 HJURPQ8NCD3 748 aaPredicted RBP17.03■□□□□ 0.32
GCFC2-202ENST00000409857 CSGALNACT1Q8TDX6 532 aa17.03■□□□□ 0.32
GCFC2-202ENST00000409857 KLHL33A6NCF5 533 aa17.03■□□□□ 0.32
GCFC2-202ENST00000409857 DRGXA6NNA5 263 aa17.03■□□□□ 0.32
GCFC2-202ENST00000409857 ITM2AO43736 263 aa17.03■□□□□ 0.32
GCFC2-202ENST00000409857 SNNO75324 88 aaPredicted RBP17.03■□□□□ 0.32
GCFC2-202ENST00000409857 CIB2O75838 187 aa17.03■□□□□ 0.32
GCFC2-202ENST00000409857 SORBS2O94875 1100 aaKnown RBP17.03■□□□□ 0.32
GCFC2-202ENST00000409857 METTL18O95568 372 aa17.03■□□□□ 0.32
GCFC2-202ENST00000409857 BPGMP07738 259 aa17.03■□□□□ 0.32
GCFC2-202ENST00000409857 GLULP15104 373 aa17.03■□□□□ 0.32
GCFC2-202ENST00000409857 SLC25A3Q00325 362 aa17.03■□□□□ 0.32
GCFC2-202ENST00000409857 ARTNQ5T4W7 220 aa17.03■□□□□ 0.32
GCFC2-202ENST00000409857 FBXL22Q6P050 247 aa17.03■□□□□ 0.32
GCFC2-202ENST00000409857 TMEM25Q86YD3 366 aa17.03■□□□□ 0.32
GCFC2-202ENST00000409857 GALNT15Q8N3T1 639 aa17.03■□□□□ 0.32
GCFC2-202ENST00000409857 MSANTD3Q96H12 275 aa17.03■□□□□ 0.32
GCFC2-202ENST00000409857 PRICKLE1Q96MT3 831 aaPredicted RBP17.03■□□□□ 0.32
GCFC2-202ENST00000409857 SIK2Q9H0K1 926 aa17.03■□□□□ 0.32
GCFC2-202ENST00000409857 TYW5A2RUC4 315 aaKnown RBP17.02■□□□□ 0.32
GCFC2-202ENST00000409857 ADH5P11766 374 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms