RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 RACK1P63244 317 aaKnown RBP22.52■■□□□ 1.2
PTCD3-203ENST00000409783 SKOR1P84550 965 aa22.52■■□□□ 1.2
PTCD3-203ENST00000409783 SETMARQ53H47 684 aaPredicted RBP22.52■■□□□ 1.2
PTCD3-203ENST00000409783 CFAP58Q5T655 872 aa22.52■■□□□ 1.2
PTCD3-203ENST00000409783 PIH1D2Q8WWB5 315 aa22.52■■□□□ 1.2
PTCD3-203ENST00000409783 IMP4Q96G21 291 aaKnown RBP22.52■■□□□ 1.2
PTCD3-203ENST00000409783 GLOD4Q9HC38 313 aa22.52■■□□□ 1.2
PTCD3-203ENST00000409783 HAUS2Q9NVX0 235 aa22.52■■□□□ 1.2
PTCD3-203ENST00000409783 PCDHB9Q9Y5E1 797 aa22.52■■□□□ 1.2
PTCD3-203ENST00000409783 KNL1Q8NG31 2342 aa22.52■■□□□ 1.2
PTCD3-203ENST00000409783 A0A1W2PQ67 120 aa22.51■■□□□ 1.19
PTCD3-203ENST00000409783 A0A1W2PR77 199 aa22.51■■□□□ 1.19
PTCD3-203ENST00000409783 IGLON5A6NGN9 336 aa22.51■■□□□ 1.19
PTCD3-203ENST00000409783 PRR5-ARHGAP8B1AHC4 643 aa22.51■■□□□ 1.19
PTCD3-203ENST00000409783 H7C0C1 242 aa22.51■■□□□ 1.19
PTCD3-203ENST00000409783 KCNK3O14649 394 aa22.51■■□□□ 1.19
PTCD3-203ENST00000409783 GDF9O60383 454 aa22.51■■□□□ 1.19
PTCD3-203ENST00000409783 FOXD2O60548 495 aaPredicted RBP22.51■■□□□ 1.19
PTCD3-203ENST00000409783 WNT1P04628 370 aa22.51■■□□□ 1.19
PTCD3-203ENST00000409783 PRLRP16471 622 aa22.51■■□□□ 1.19
PTCD3-203ENST00000409783 XPAP23025 273 aaPredicted RBP22.51■■□□□ 1.19
PTCD3-203ENST00000409783 ATP5OP48047 213 aa22.51■■□□□ 1.19
PTCD3-203ENST00000409783 POLR2LP62875 67 aaKnown RBP22.51■■□□□ 1.19
PTCD3-203ENST00000409783 ELP6Q0PNE2 266 aa22.51■■□□□ 1.19
PTCD3-203ENST00000409783 RALGDSQ12967 914 aa22.51■■□□□ 1.19
PTCD3-203ENST00000409783 SEL1L2Q5TEA6 688 aa22.51■■□□□ 1.19
PTCD3-203ENST00000409783 NAPEPLDQ6IQ20 393 aa22.51■■□□□ 1.19
PTCD3-203ENST00000409783 ZSCAN30Q86W11 494 aa22.51■■□□□ 1.19
PTCD3-203ENST00000409783 SLC13A5Q86YT5 568 aaPredicted RBP22.51■■□□□ 1.19
PTCD3-203ENST00000409783 ZNF567Q8N184 647 aa22.51■■□□□ 1.19
PTCD3-203ENST00000409783 TTC13Q8NBP0 860 aa22.51■■□□□ 1.19
PTCD3-203ENST00000409783 TMEM145Q8NBT3 493 aa22.51■■□□□ 1.19
PTCD3-203ENST00000409783 SERAC1Q96JX3 654 aa22.51■■□□□ 1.19
PTCD3-203ENST00000409783 NUSAP1Q9BXS6 441 aaKnown RBP22.51■■□□□ 1.19
PTCD3-203ENST00000409783 TDRD1Q9BXT4 1180 aaKnown RBP22.51■■□□□ 1.19
PTCD3-203ENST00000409783 SLC17A9Q9BYT1 436 aa22.51■■□□□ 1.19
PTCD3-203ENST00000409783 SLC25A51Q9H1U9 297 aa22.51■■□□□ 1.19
PTCD3-203ENST00000409783 PPIL1Q9Y3C6 166 aa22.51■■□□□ 1.19
PTCD3-203ENST00000409783 NEMP1O14524 444 aa22.5■■□□□ 1.19
PTCD3-203ENST00000409783 SLC31A1O15431 190 aa22.5■■□□□ 1.19
PTCD3-203ENST00000409783 MMP20O60882 483 aa22.5■■□□□ 1.19
PTCD3-203ENST00000409783 CPP00450 1065 aa22.5■■□□□ 1.19
PTCD3-203ENST00000409783 CD86P42081 329 aa22.5■■□□□ 1.19
PTCD3-203ENST00000409783 GRIA4P48058 902 aa22.5■■□□□ 1.19
PTCD3-203ENST00000409783 CSNK1EP49674 416 aaKnown RBP22.5■■□□□ 1.19
PTCD3-203ENST00000409783 AFF3P51826 1226 aaKnown RBP22.5■■□□□ 1.19
PTCD3-203ENST00000409783 SEMG2Q02383 582 aa22.5■■□□□ 1.19
PTCD3-203ENST00000409783 ARMC12Q5T9G4 340 aa22.5■■□□□ 1.19
PTCD3-203ENST00000409783 LAYNQ6UX15 382 aa22.5■■□□□ 1.19
PTCD3-203ENST00000409783 DPPA4Q7L190 304 aa22.5■■□□□ 1.19
PTCD3-203ENST00000409783 C12orf50Q8NA57 414 aaPredicted RBP22.5■■□□□ 1.19
PTCD3-203ENST00000409783 SLC35B2Q8TB61 432 aa22.5■■□□□ 1.19
PTCD3-203ENST00000409783 PDCD6IPQ8WUM4 868 aaKnown RBP22.5■■□□□ 1.19
PTCD3-203ENST00000409783 ASB12Q8WXK4 309 aa22.5■■□□□ 1.19
PTCD3-203ENST00000409783 VAT1Q99536 393 aa22.5■■□□□ 1.19
PTCD3-203ENST00000409783 KLF6Q99612 283 aaPredicted RBP22.5■■□□□ 1.19
PTCD3-203ENST00000409783 USP29Q9HBJ7 922 aa22.5■■□□□ 1.19
PTCD3-203ENST00000409783 PHTF1Q9UMS5 762 aa22.5■■□□□ 1.19
PTCD3-203ENST00000409783 CFAP54Q96N23 3096 aa22.5■■□□□ 1.19
PTCD3-203ENST00000409783 TMEM131Q92545 1883 aa22.49■■□□□ 1.19
PTCD3-203ENST00000409783 GOLGA6L9A6NEM1 432 aa22.49■■□□□ 1.19
PTCD3-203ENST00000409783 RAD51BO15315 384 aa22.49■■□□□ 1.19
PTCD3-203ENST00000409783 ENGP17813 658 aa22.49■■□□□ 1.19
PTCD3-203ENST00000409783 PTPRRQ15256 657 aa22.49■■□□□ 1.19
PTCD3-203ENST00000409783 SIX1Q15475 284 aaPredicted RBP22.49■■□□□ 1.19
PTCD3-203ENST00000409783 SLC14A2Q15849 920 aa22.49■■□□□ 1.19
PTCD3-203ENST00000409783 ERAP2Q6P179 960 aa22.49■■□□□ 1.19
PTCD3-203ENST00000409783 CDKL3Q8IVW4 592 aaPredicted RBP22.49■■□□□ 1.19
PTCD3-203ENST00000409783 SLC35F6Q8N357 371 aa22.49■■□□□ 1.19
PTCD3-203ENST00000409783 MCCC1Q96RQ3 725 aaPredicted RBP22.49■■□□□ 1.19
PTCD3-203ENST00000409783 RBM15Q96T37 977 aaKnown RBP eCLIP22.49■■□□□ 1.19
PTCD3-203ENST00000409783 WRAP53Q9BUR4 548 aaKnown RBP22.49■■□□□ 1.19
PTCD3-203ENST00000409783 FZD3Q9NPG1 666 aa22.49■■□□□ 1.19
PTCD3-203ENST00000409783 CA5BQ9Y2D0 317 aa22.49■■□□□ 1.19
PTCD3-203ENST00000409783 JRKLQ9Y4A0 524 aa22.49■■□□□ 1.19
PTCD3-203ENST00000409783 CEP250Q9BV73 2442 aa22.48■■□□□ 1.19
PTCD3-203ENST00000409783 A0A1B0GVT2 93 aa22.48■■□□□ 1.19
PTCD3-203ENST00000409783 PRAMEF26H0Y7S4 382 aa22.48■■□□□ 1.19
PTCD3-203ENST00000409783 ARHGAP33O14559 1287 aa22.48■■□□□ 1.19
PTCD3-203ENST00000409783 CDX4O14627 284 aaPredicted RBP22.48■■□□□ 1.19
PTCD3-203ENST00000409783 ENC1O14682 589 aa22.48■■□□□ 1.19
PTCD3-203ENST00000409783 PAK4O96013 591 aaPredicted RBP22.48■■□□□ 1.19
PTCD3-203ENST00000409783 NFKB1P19838 968 aa22.48■■□□□ 1.19
PTCD3-203ENST00000409783 HNRNPA2B1P22626 353 aaKnown RBP22.48■■□□□ 1.19
PTCD3-203ENST00000409783 FAM193AP78312 1265 aa22.48■■□□□ 1.19
PTCD3-203ENST00000409783 LMNB2Q03252 620 aa22.48■■□□□ 1.19
PTCD3-203ENST00000409783 GRIK2Q13002 908 aa22.48■■□□□ 1.19
PTCD3-203ENST00000409783 AASDHQ4L235 1098 aaPredicted RBP22.48■■□□□ 1.19
PTCD3-203ENST00000409783 ZNF569Q5MCW4 686 aa22.48■■□□□ 1.19
PTCD3-203ENST00000409783 SPATA22Q8NHS9 363 aa22.48■■□□□ 1.19
PTCD3-203ENST00000409783 CXorf40AQ8TE69 158 aa22.48■■□□□ 1.19
PTCD3-203ENST00000409783 LENG8Q96PV6 779 aaPredicted RBP22.48■■□□□ 1.19
PTCD3-203ENST00000409783 SMIM14Q96QK8 99 aa22.48■■□□□ 1.19
PTCD3-203ENST00000409783 TRIB3Q96RU7 358 aa22.48■■□□□ 1.19
PTCD3-203ENST00000409783 B4GALT6Q9UBX8 382 aa22.48■■□□□ 1.19
PTCD3-203ENST00000409783 CHKBQ9Y259 395 aa22.48■■□□□ 1.19
PTCD3-203ENST00000409783 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.48■■□□□ 1.19
PTCD3-203ENST00000409783 DMXL1Q9Y485 3027 aa22.48■■□□□ 1.19
PTCD3-203ENST00000409783 CFAP69A5D8W1 941 aa22.47■■□□□ 1.19
PTCD3-203ENST00000409783 VILLO15195 856 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms