RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 BUB1BO60566 1050 aaPredicted RBP14.65□□□□□ -0.06
NIF3L1-205ENST00000409588 SDC3O75056 442 aa14.65□□□□□ -0.06
NIF3L1-205ENST00000409588 JUNDP17535 347 aa14.65□□□□□ -0.06
NIF3L1-205ENST00000409588 IL1R2P27930 398 aa14.65□□□□□ -0.06
NIF3L1-205ENST00000409588 DAB2P98082 770 aa14.65□□□□□ -0.06
NIF3L1-205ENST00000409588 PDK2Q15119 407 aa14.65□□□□□ -0.06
NIF3L1-205ENST00000409588 SLC18A3Q16572 532 aa14.65□□□□□ -0.06
NIF3L1-205ENST00000409588 CCDC157Q569K6 752 aa14.65□□□□□ -0.06
NIF3L1-205ENST00000409588 LVRNQ6Q4G3 990 aa14.65□□□□□ -0.06
NIF3L1-205ENST00000409588 CAMK1DQ8IU85 385 aa14.65□□□□□ -0.06
NIF3L1-205ENST00000409588 TPCN2Q8NHX9 752 aa14.65□□□□□ -0.06
NIF3L1-205ENST00000409588 HSPH1Q92598 858 aa14.65□□□□□ -0.06
NIF3L1-205ENST00000409588 GRAMD1AQ96CP6 724 aa14.65□□□□□ -0.06
NIF3L1-205ENST00000409588 CSPG4P5Q96PW8 444 aa14.65□□□□□ -0.06
NIF3L1-205ENST00000409588 DNAJC7Q99615 494 aa14.65□□□□□ -0.06
NIF3L1-205ENST00000409588 IL12RB2Q99665 862 aa14.65□□□□□ -0.06
NIF3L1-205ENST00000409588 SLC13A1Q9BZW2 595 aa14.65□□□□□ -0.06
NIF3L1-205ENST00000409588 XPO4Q9C0E2 1151 aaKnown RBP14.65□□□□□ -0.06
NIF3L1-205ENST00000409588 PCDH12Q9NPG4 1184 aa14.65□□□□□ -0.06
NIF3L1-205ENST00000409588 ATP8A1Q9Y2Q0 1164 aa14.65□□□□□ -0.06
NIF3L1-205ENST00000409588 DOCK9Q9BZ29 2069 aa14.65□□□□□ -0.06
NIF3L1-205ENST00000409588 DMXL2Q8TDJ6 3036 aa14.65□□□□□ -0.06
NIF3L1-205ENST00000409588 KNTC1P50748 2209 aa14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 K7ESM1 405 aa14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 AQP9O43315 295 aa14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 LZTS3O60299 673 aaPredicted RBP14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 SOCS5O75159 536 aa14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 KRT7P08729 469 aa14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 HOXC4P09017 264 aaPredicted RBP14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 KRT10P13645 584 aa14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 AMPD1P23109 780 aa14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 EIF4A3P38919 411 aaKnown RBP14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 RPIAP49247 311 aa14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 SCNN1BP51168 640 aa14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 SLC25A11Q02978 314 aaKnown RBP14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 KRT81Q14533 505 aa14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 MARC1Q5VT66 337 aa14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 ADGRD1Q6QNK2 874 aa14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 MACC1Q6ZN28 852 aa14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 NDUFAF2Q8N183 169 aa14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 FSTL5Q8N475 847 aaPredicted RBP14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 NPWQ8N729 165 aa14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 TP53I13Q8NBR0 393 aaPredicted RBP14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 ZNF548Q8NEK5 533 aaPredicted RBP14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 SCG3Q8WXD2 468 aaKnown RBP14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 CTNNBL1Q8WYA6 563 aaPredicted RBP14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 FATE1Q969F0 183 aa14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 EXOC2Q96KP1 924 aa14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 APOLD1Q96LR9 279 aa14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 UCKL1Q9NWZ5 548 aa14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 AMACRQ9UHK6 382 aa14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 GGT7Q9UJ14 662 aa14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 CLCA2Q9UQC9 943 aa14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 ITM2BQ9Y287 266 aa14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 SPEGQ15772 3267 aa14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 PTPRBP23467 1997 aa14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 TP53BP1Q12888 1972 aaPredicted RBP14.64□□□□□ -0.07
NIF3L1-205ENST00000409588 LMO7DNF2Z398 122 aa14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 TRAFD1O14545 582 aaPredicted RBP14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 MAFKO60675 156 aa14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 PIGNO95427 931 aa14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 GIMD1P0DJR0 217 aa14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 MMP12P39900 470 aa14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 ARHGAP25P42331 645 aa14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 LIG3P49916 1009 aa14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 PPARDQ03181 441 aa14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 SLC10A7Q0GE19 358 aa14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 MTM1Q13496 603 aa14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 ZNF235Q14590 738 aa14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 SMTNL2Q2TAL5 461 aa14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 ATPAF2Q8N5M1 289 aa14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 PAF1Q8N7H5 531 aa14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 WDR48Q8TAF3 677 aa14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 ZNF564Q8TBZ8 553 aaPredicted RBP14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 NXPE2Q96DL1 559 aa14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 NUDCD1Q96RS6 583 aa14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 ANP32EQ9BTT0 268 aa14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 WRAP53Q9BUR4 548 aaKnown RBP14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 ABCG4Q9H172 646 aa14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 DEF6Q9H4E7 631 aa14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 PCDH18Q9HCL0 1135 aa14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 CTTNBP2NLQ9P2B4 639 aa14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 PHTF1Q9UMS5 762 aa14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 NENFQ9UMX5 172 aa14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 ZZEF1O43149 2961 aa14.63□□□□□ -0.07
NIF3L1-205ENST00000409588 PLXNB3Q9ULL4 1909 aa14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 ARID1BQ8NFD5 2236 aaPredicted RBP14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 TAF4O00268 1085 aa14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 PDE2AO00408 941 aaPredicted RBP14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 FFAR2O15552 330 aa14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 HTRA2O43464 458 aaPredicted RBP14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 AKR1B10O60218 316 aa14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 PROSCO94903 275 aa14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 ALPIP09923 528 aa14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 IGF2RP11717 2491 aa14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 C6P13671 934 aa14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 KELP23276 732 aa14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 IL4RP24394 825 aa14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 MAN1A1P33908 653 aa14.62□□□□□ -0.07
NIF3L1-205ENST00000409588 IGFALSP35858 605 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms