RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 OR1E3Q8WZA6 343 aa12.97□□□□□ -0.33
CHRNA1-203ENST00000409219 ARHGEF2Q92974 986 aaKnown RBP12.97□□□□□ -0.33
CHRNA1-203ENST00000409219 DDA1Q9BW61 102 aa12.97□□□□□ -0.33
CHRNA1-203ENST00000409219 DPEP2Q9H4A9 486 aa12.97□□□□□ -0.33
CHRNA1-203ENST00000409219 FGF22Q9HCT0 170 aa12.97□□□□□ -0.33
CHRNA1-203ENST00000409219 CRYBG3Q68DQ2 2970 aa12.96□□□□□ -0.33
CHRNA1-203ENST00000409219 CXorf51AA0A1B0GTR3 108 aa12.96□□□□□ -0.34
CHRNA1-203ENST00000409219 K7EM74 188 aa12.96□□□□□ -0.34
CHRNA1-203ENST00000409219 P4HA2O15460 535 aa12.96□□□□□ -0.34
CHRNA1-203ENST00000409219 CAPN5O15484 640 aaPredicted RBP12.96□□□□□ -0.34
CHRNA1-203ENST00000409219 SRGAP2O75044 1071 aa12.96□□□□□ -0.34
CHRNA1-203ENST00000409219 SULT1E1P49888 294 aa12.96□□□□□ -0.34
CHRNA1-203ENST00000409219 MAZP56270 477 aaKnown RBP12.96□□□□□ -0.34
CHRNA1-203ENST00000409219 SNRPD1P62314 119 aaKnown RBP12.96□□□□□ -0.34
CHRNA1-203ENST00000409219 LRRC63Q05C16 580 aa12.96□□□□□ -0.34
CHRNA1-203ENST00000409219 MYLK3Q32MK0 819 aa12.96□□□□□ -0.34
CHRNA1-203ENST00000409219 COBLL1Q53SF7 1204 aa12.96□□□□□ -0.34
CHRNA1-203ENST00000409219 CAPRIN2Q6IMN6 1127 aaKnown RBP12.96□□□□□ -0.34
CHRNA1-203ENST00000409219 GDPD4Q6W3E5 623 aa12.96□□□□□ -0.34
CHRNA1-203ENST00000409219 IRF2BP1Q8IU81 584 aa12.96□□□□□ -0.34
CHRNA1-203ENST00000409219 PASD1Q8IV76 773 aa12.96□□□□□ -0.34
CHRNA1-203ENST00000409219 ATL2Q8NHH9 583 aa12.96□□□□□ -0.34
CHRNA1-203ENST00000409219 CCL4L1Q8NHW4 92 aa12.96□□□□□ -0.34
CHRNA1-203ENST00000409219 C1orf74Q96LT6 269 aa12.96□□□□□ -0.34
CHRNA1-203ENST00000409219 GTPBP4Q9BZE4 634 aaKnown RBP12.96□□□□□ -0.34
CHRNA1-203ENST00000409219 ZYG11BQ9C0D3 744 aa12.96□□□□□ -0.34
CHRNA1-203ENST00000409219 TMEM168Q9H0V1 697 aa12.96□□□□□ -0.34
CHRNA1-203ENST00000409219 GPN2Q9H9Y4 310 aaPredicted RBP12.96□□□□□ -0.34
CHRNA1-203ENST00000409219 MRPL40Q9NQ50 206 aaKnown RBP12.96□□□□□ -0.34
CHRNA1-203ENST00000409219 NDFIP2Q9NV92 336 aa12.96□□□□□ -0.34
CHRNA1-203ENST00000409219 PILRAQ9UKJ1 303 aa12.96□□□□□ -0.34
CHRNA1-203ENST00000409219 CELSR2Q9HCU4 2923 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 MED13Q9UHV7 2174 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 ZNF106Q9H2Y7 1883 aaKnown RBP12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 LOC101059948A0A1B0GTJ6 334 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 A1L4Q6 167 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 TMEM202A6NGA9 273 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 POP4O95707 220 aaKnown RBP12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 PCCBP05166 539 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 TIMP2P16035 220 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 GNLYP22749 145 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 ALDH4A1P30038 563 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 SLC6A3Q01959 620 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 CETN1Q12798 172 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 NR1D2Q14995 579 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 POLD3Q15054 466 aaPredicted RBP12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 DEFB109BQ30KR1 87 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 PTPN20Q4JDL3 420 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 TMEM52BQ4KMG9 183 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 ATP1A1-AS1Q5TC04 95 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 FHL5Q5TD97 284 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 ZNF787Q6DD87 383 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 LEKR1Q6ZMV7 388 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 ZNF438Q7Z4V0 828 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 C1orf131Q8NDD1 294 aaKnown RBP12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 EHBP1Q8NDI1 1231 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 AGBL5Q8NDL9 886 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 CCDC112Q8NEF3 446 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 ZNF397Q8NF99 534 aaPredicted RBP12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 NT5C3BQ969T7 300 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 PGAP3Q96FM1 320 aaPredicted RBP12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 TBCBQ99426 244 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 GOLPH3LQ9H4A5 285 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 RRN3Q9NYV6 651 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 C2CD3Q4AC94 2353 aa12.95□□□□□ -0.34
CHRNA1-203ENST00000409219 LIMK2P53671 638 aa12.94□□□□□ -0.34
CHRNA1-203ENST00000409219 DEUP1Q05D60 604 aa12.94□□□□□ -0.34
CHRNA1-203ENST00000409219 MTM1Q13496 603 aa12.94□□□□□ -0.34
CHRNA1-203ENST00000409219 TRA2AQ13595 282 aaKnown RBP eCLIP12.94□□□□□ -0.34
CHRNA1-203ENST00000409219 CLPPQ16740 277 aaPredicted RBP12.94□□□□□ -0.34
CHRNA1-203ENST00000409219 CCDC40Q4G0X9 1142 aa12.94□□□□□ -0.34
CHRNA1-203ENST00000409219 ANKS6Q68DC2 871 aa12.94□□□□□ -0.34
CHRNA1-203ENST00000409219 C17orf82Q86X59 251 aaPredicted RBP12.94□□□□□ -0.34
CHRNA1-203ENST00000409219 UNC5BQ8IZJ1 945 aa12.94□□□□□ -0.34
CHRNA1-203ENST00000409219 PLA2G15Q8NCC3 412 aa12.94□□□□□ -0.34
CHRNA1-203ENST00000409219 OR56A4Q8NGH8 313 aa12.94□□□□□ -0.34
CHRNA1-203ENST00000409219 STARD8Q92502 1023 aa12.94□□□□□ -0.34
CHRNA1-203ENST00000409219 INTS2Q9H0H0 1204 aaKnown RBP12.94□□□□□ -0.34
CHRNA1-203ENST00000409219 LMBRD1Q9NUN5 540 aa12.94□□□□□ -0.34
CHRNA1-203ENST00000409219 OCIAD1Q9NX40 245 aa12.94□□□□□ -0.34
CHRNA1-203ENST00000409219 DKK3Q9UBP4 350 aa12.94□□□□□ -0.34
CHRNA1-203ENST00000409219 STAP1Q9ULZ2 295 aa12.94□□□□□ -0.34
CHRNA1-203ENST00000409219 SRPK3Q9UPE1 567 aa12.94□□□□□ -0.34
CHRNA1-203ENST00000409219 ESPL1Q14674 2120 aa12.94□□□□□ -0.34
CHRNA1-203ENST00000409219 HIVEP3Q5T1R4 2406 aa12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 BECN2A8MW95 431 aa12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 SEMA7AO75326 666 aa12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 VPS4BO75351 444 aa12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 PRKCGP05129 697 aa12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 THRAP10827 490 aa12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 CD1CP29017 333 aa12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 CSF2RBP32927 897 aa12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 CSTF2P33240 577 aaKnown RBP eCLIP12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 GEMIN4P57678 1058 aaKnown RBP12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 KIAA1024LP59773 190 aa12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 ELP6Q0PNE2 266 aa12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 PNOCQ13519 176 aa12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 SEPT6Q14141 434 aa12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 AGERQ15109 404 aa12.93□□□□□ -0.34
CHRNA1-203ENST00000409219 ACBD5Q5T8D3 534 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms